| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522413
Identifier: 42522413
GI number: 42522413
Start: 788605
End: 789630
Strand: Direct
Name: 42522413
Synonym: Bd0840
Alternate gene names: NA
Gene position: 788605-789630 (Clockwise)
Preceding gene: 42522412
Following gene: 42522414
Centisome position: 20.85
GC content: 51.56
Gene sequence:
>1026_bases TTGTCATCTATGGGTAAATATAAGAATTATATTTTTCTGGCTCTTCTCGTCGCTTTGTTCGTCGAGATTCTTATTATTTT CCCATCGCATCTGGAGCATGAGGACGAGGTCGCCCTGCGCCAGCGGGTTGAAAAACGCGACAAAGAAGCCAAAGAACGCA AGAAAAAGGGCATCAAGGAAGATCCGGGTCCTTCCAGTCTGGCCGATCAAAAAATGGGCGGCGTGCACTTGGTGGAAAGC CAGTCCGGCAATCGGGACTGGGAGTTGTTTGCGGTCTCTGCTGAGGGCAGTCAGGCCGGCGGCAAGTGGAGTCTGCAGCA AGTGCGGGTGCTTTTTTATAACCAGGAAAAGCTCGAGTTCACCGTCACCGGGGATGAGGGTACCATCGACGATAAATCCA AAGATCTGAGTGTTATCGGAAATGTCGTGACCAAGTCCGAGAACGGCTATGTTTTTAAGACGCCATCAATTTTTTATTCG TCAAAGACCCGTCAAATAGTCAGCCCCGAGCAGGTGCTGATGGAGGGGCCTAGGGATTCTTCCGGCGGCGGTCTGTTTTT AAAGGGCGCCAGCATGAAGGTTCTGGTTGAGCAGTCCAAGATGCTGATTCAGAACAAGGTGACGGCGCAAAAGCCGATGA AGGACGGAAAAACTTTTGATATTTCCGCGGACGGCGCCGAATTCAGCGGTAAAAGCCGCGAGGCCCGCTTCCTCGGGGCT GTTCGCATGAACTATGACAACATGAAACTGGAAGGGCCCGAGGCTTCATTCCTTTATGGAAAGGGCGCGGATATTCTCAG TTCCGTGGCGGTGAAAGGCGGGGTGCGCGTCAGTGACGTGGACAAATTCGCCACCTCCGAGAGTGTGAATCTGGACCTGC TGGCAAATCAGTACACGTTCAAGGGTCGCCCCAAGGTGATCCAGAATAATGATGAGCTGACCGGAGAGGAAATCGTCTTC CTTGAAGGCGGAAAAAAGGTTAAAGTGGAACGAGTACGAGCGAAGGTGGAGAATAAAGATCAATGA
Upstream 100 bases:
>100_bases ATACATGAAAGCCCGGTGAAAACCGGGCTTTTTGTTTTTCATCCCGGTACAGCATCCGACGCGGAAGTTTTGACCGCGGG TCTGTGATGGTTTAAGATTC
Downstream 100 bases:
>100_bases GCATGCTCACCATCAAAGACATTTCTAAGTCCTTTAAAAAGCGCAAGGTCGTTGATGGCGCCTCTTTTTCTGTGGAGTCC GGTCAGGTTGTAGGCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSSMGKYKNYIFLALLVALFVEILIIFPSHLEHEDEVALRQRVEKRDKEAKERKKKGIKEDPGPSSLADQKMGGVHLVES QSGNRDWELFAVSAEGSQAGGKWSLQQVRVLFYNQEKLEFTVTGDEGTIDDKSKDLSVIGNVVTKSENGYVFKTPSIFYS SKTRQIVSPEQVLMEGPRDSSGGGLFLKGASMKVLVEQSKMLIQNKVTAQKPMKDGKTFDISADGAEFSGKSREARFLGA VRMNYDNMKLEGPEASFLYGKGADILSSVAVKGGVRVSDVDKFATSESVNLDLLANQYTFKGRPKVIQNNDELTGEEIVF LEGGKKVKVERVRAKVENKDQ
Sequences:
>Translated_341_residues MSSMGKYKNYIFLALLVALFVEILIIFPSHLEHEDEVALRQRVEKRDKEAKERKKKGIKEDPGPSSLADQKMGGVHLVES QSGNRDWELFAVSAEGSQAGGKWSLQQVRVLFYNQEKLEFTVTGDEGTIDDKSKDLSVIGNVVTKSENGYVFKTPSIFYS SKTRQIVSPEQVLMEGPRDSSGGGLFLKGASMKVLVEQSKMLIQNKVTAQKPMKDGKTFDISADGAEFSGKSREARFLGA VRMNYDNMKLEGPEASFLYGKGADILSSVAVKGGVRVSDVDKFATSESVNLDLLANQYTFKGRPKVIQNNDELTGEEIVF LEGGKKVKVERVRAKVENKDQ >Mature_340_residues SSMGKYKNYIFLALLVALFVEILIIFPSHLEHEDEVALRQRVEKRDKEAKERKKKGIKEDPGPSSLADQKMGGVHLVESQ SGNRDWELFAVSAEGSQAGGKWSLQQVRVLFYNQEKLEFTVTGDEGTIDDKSKDLSVIGNVVTKSENGYVFKTPSIFYSS KTRQIVSPEQVLMEGPRDSSGGGLFLKGASMKVLVEQSKMLIQNKVTAQKPMKDGKTFDISADGAEFSGKSREARFLGAV RMNYDNMKLEGPEASFLYGKGADILSSVAVKGGVRVSDVDKFATSESVNLDLLANQYTFKGRPKVIQNNDELTGEEIVFL EGGKKVKVERVRAKVENKDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37765; Mature: 37634
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSMGKYKNYIFLALLVALFVEILIIFPSHLEHEDEVALRQRVEKRDKEAKERKKKGIKE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC DPGPSSLADQKMGGVHLVESQSGNRDWELFAVSAEGSQAGGKWSLQQVRVLFYNQEKLEF CCCCCCHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHEEEEEEECCCEEEE TVTGDEGTIDDKSKDLSVIGNVVTKSENGYVFKTPSIFYSSKTRQIVSPEQVLMEGPRDS EEECCCCCCCCCCCCHHHHHHHHEECCCCEEEECCCEEECCCCCCCCCHHHHHHCCCCCC SGGGLFLKGASMKVLVEQSKMLIQNKVTAQKPMKDGKTFDISADGAEFSGKSREARFLGA CCCEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEE VRMNYDNMKLEGPEASFLYGKGADILSSVAVKGGVRVSDVDKFATSESVNLDLLANQYTF EEECCCCEEECCCCCEEEECCCHHHHHHHHHHCCCEEEHHHHHHCCCCCEEEEEECCEEE KGRPKVIQNNDELTGEEIVFLEGGKKVKVERVRAKVENKDQ CCCCCEECCCCCCCCCEEEEEECCCEEEHHHHHHHHCCCCC >Mature Secondary Structure SSMGKYKNYIFLALLVALFVEILIIFPSHLEHEDEVALRQRVEKRDKEAKERKKKGIKE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC DPGPSSLADQKMGGVHLVESQSGNRDWELFAVSAEGSQAGGKWSLQQVRVLFYNQEKLEF CCCCCCHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHEEEEEEECCCEEEE TVTGDEGTIDDKSKDLSVIGNVVTKSENGYVFKTPSIFYSSKTRQIVSPEQVLMEGPRDS EEECCCCCCCCCCCCHHHHHHHHEECCCCEEEECCCEEECCCCCCCCCHHHHHHCCCCCC SGGGLFLKGASMKVLVEQSKMLIQNKVTAQKPMKDGKTFDISADGAEFSGKSREARFLGA CCCEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEE VRMNYDNMKLEGPEASFLYGKGADILSSVAVKGGVRVSDVDKFATSESVNLDLLANQYTF EEECCCCEEECCCCCEEEECCCHHHHHHHHHHCCCEEEHHHHHHCCCCCEEEEEECCEEE KGRPKVIQNNDELTGEEIVFLEGGKKVKVERVRAKVENKDQ CCCCCEECCCCCCCCCEEEEEECCCEEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA