Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522409

Identifier: 42522409

GI number: 42522409

Start: 784600

End: 786723

Strand: Direct

Name: 42522409

Synonym: Bd0834

Alternate gene names: NA

Gene position: 784600-786723 (Clockwise)

Preceding gene: 42522408

Following gene: 42522410

Centisome position: 20.74

GC content: 55.32

Gene sequence:

>2124_bases
TTGAGATCGCCGTTAATATTTAGAATTTTCAAAAACAATCAGCTCGTTGGTGTTAAACAGTTCGATCAGGATCAAATCGT
GGTCGGACACAATGCTGAAGTGCATCTGGATCTGGATGCCGACGGCGTTTCACCCATTCACTGTCTGATCGAACTTCGTG
ACAACGGATGGTATGTCTGTGATTTGGGTTCCTCTCAGGGGACTTTCAAAAACGGGCAGGCTGTTCTGGATGAAGCCATC
GCTTCTGGCGATGAAATCGAAGTGGGTCCTTTCCGTATTGCCTTCTTTGTGGGTGTGCCGAAGCCTAAAGTGGTTCCGGG
CGCGCCAGCTTCTGAAGCTGTGGCTCCAGTGGCTGAAGTGCCAGCGCCACCTCCGCCAAAGCCGGAGCCCTCCATGCCGC
CTGCGGCCGTGGTGAAGACGGAAGAAATCAAAGTCACTCCGGTGATCCCGGCGGTGACTCCGAGCATTCCAGTGGAAGCT
CCGAAGGCCGAGGAAAAGCCTGTTCTGACTACGGCTCCGGTAAAACCTGAGATCCGCAAAGAACGCTCTTCTTACAAAAA
GGCCAAGAAAAGCAAAACATTCGCTCCTCCAAGCGAGATTCAGAATCTGAAATCGCACCTGAAGCCTGGTAAAGGCACGA
CGGTCGAAGTTCTGGTCACCTGGAAAGAGCGCATTCTGACGACTTATCATTTCAAGGGCAACAAAACCATCCGCGTGAAT
GCGGGCGGGGACTTGTCTGTGGCTCTTCCTGACGGACTGGTGCCGCGCGGTTATCCGCTGCTGGACATGTCTGCAGGTCT
GCGTGTGAACACCACCAACGAGATGGACACCGAAATGGTGATCTCTGGCGGCGTGACCCAGCACGTGGAAGACCTTGCCA
AATCCGGCAAGGCACAAAAGGGCGGCAACGGTTACAGTGTGCGCGTGGATCAGAACGAAATGCTGTGTGTGAATCTGCCG
GGTGGAAACCTGTGCCTTTACATCCGCTTCGTTCCGCAGGCGCCAACGGTGCCGATGCTTCCAATGATGCTTTCCGGTTC
TGAAATGACGGGTTTGGCAATGTCCCTGATTATCGTGGGACTGCTGGCTTTGTATATTTCCGCAACCATTCCGAAAGACT
GGCAGGAAAACAAGCAGGAAGAGGTTCAGCGTATTGCCCAGGTGGTGTTCACTAATCCACCGCCGGCGCCAACGCCGACC
CCGACGCCTCCTCCACCAGTGCCTCCGACTCCGCCGCCGCAACCGGTGGCGACGCCGACTCCGCCTCCACCTAAGAAAGT
GGTTGTGGCTGATGCGAACAAGGAAGCACAGAAAAAAGGAACGACCGGACAGCAGGCTCAGCGTGCCCAAGTGGCGGCAA
GAGCCAGCGAAGTGGCTCCGAAGCCCAACGCGAAAGACCGCACCAAGAAGTTCACGTCCACTCGTCAGGGGGGCGCGATC
AAAACGGGTAACACGGCCGGTGCGAATGCTCAGTCTTCCAACAAAGATCTTTCCAAAGTGGGTCTGTTCAGCGCCTTCGG
TGGCGGTGGCAGCCGCGCCAACATCGACAAAGCCTACTCTGGAGCCGGTGAGGTTCTGGGTATGGCCGACAAGGCGACCG
GAACGGCGGGCTTCAATGAAGACCGTGCTGGTGATGATCTGGGATCCAAATTCAAGGATGCCGGAGCTGGTGGAAAAGGG
ACCGCAACTCAAGGTATCGCCGGAATCGGCACCAAGGGTCGTGGGTCAGGTCAGGCTGCTTACGGTGCGTCTGAGGGCTT
CGGTTCGAAGACCACAGTGGCTATCGAAGGCGGTGGTGCTGAAGAATCCTTCGACGCTACCATTGACAAAGAAGCTATCC
GTCGTGTGATCCGCTCTAAACTTAACGAGGTGAAAAGCTGCTACGAGCGGGCTTTGAACACTCTTGAGAAGGGTAAGAAG
ATGGAAGGTAAAGTGATTCTTGCTTGGGAGATCATCGAGCGAGGTCAGGCACGCAACGTGAAAGTTGTCGATTCCACACT
GGGCAACCCTGGAGTGGAAGAATGTATCCGCCGTCGTCTGGCAAGCTGGGTGTTCCCAGAGCCACCGACCGGAATGACAG
CTGAAGTACAGGCGTACCCGTTTGTTTTGAATCAGGCTAATTAA

Upstream 100 bases:

>100_bases
AGAAAAACTTCAACTATAAGAGATTGATCAAGTTGAGAGAAAACTTTTTACCCGAGATGAGACGAACAACAGAGGATATC
CAGCGGGTCCGGGGTGCTAA

Downstream 100 bases:

>100_bases
TTAAAGTTTTTAAGAAGGAGAACTTCCCGTGAACCCAACAGTTACAGTAGACAACATGAATTTCATCCAGCGTGCTTTCG
CCGAGGGTGGTTTCGTCATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 707; Mature: 707

Protein sequence:

>707_residues
MRSPLIFRIFKNNQLVGVKQFDQDQIVVGHNAEVHLDLDADGVSPIHCLIELRDNGWYVCDLGSSQGTFKNGQAVLDEAI
ASGDEIEVGPFRIAFFVGVPKPKVVPGAPASEAVAPVAEVPAPPPPKPEPSMPPAAVVKTEEIKVTPVIPAVTPSIPVEA
PKAEEKPVLTTAPVKPEIRKERSSYKKAKKSKTFAPPSEIQNLKSHLKPGKGTTVEVLVTWKERILTTYHFKGNKTIRVN
AGGDLSVALPDGLVPRGYPLLDMSAGLRVNTTNEMDTEMVISGGVTQHVEDLAKSGKAQKGGNGYSVRVDQNEMLCVNLP
GGNLCLYIRFVPQAPTVPMLPMMLSGSEMTGLAMSLIIVGLLALYISATIPKDWQENKQEEVQRIAQVVFTNPPPAPTPT
PTPPPPVPPTPPPQPVATPTPPPPKKVVVADANKEAQKKGTTGQQAQRAQVAARASEVAPKPNAKDRTKKFTSTRQGGAI
KTGNTAGANAQSSNKDLSKVGLFSAFGGGGSRANIDKAYSGAGEVLGMADKATGTAGFNEDRAGDDLGSKFKDAGAGGKG
TATQGIAGIGTKGRGSGQAAYGASEGFGSKTTVAIEGGGAEESFDATIDKEAIRRVIRSKLNEVKSCYERALNTLEKGKK
MEGKVILAWEIIERGQARNVKVVDSTLGNPGVEECIRRRLASWVFPEPPTGMTAEVQAYPFVLNQAN

Sequences:

>Translated_707_residues
MRSPLIFRIFKNNQLVGVKQFDQDQIVVGHNAEVHLDLDADGVSPIHCLIELRDNGWYVCDLGSSQGTFKNGQAVLDEAI
ASGDEIEVGPFRIAFFVGVPKPKVVPGAPASEAVAPVAEVPAPPPPKPEPSMPPAAVVKTEEIKVTPVIPAVTPSIPVEA
PKAEEKPVLTTAPVKPEIRKERSSYKKAKKSKTFAPPSEIQNLKSHLKPGKGTTVEVLVTWKERILTTYHFKGNKTIRVN
AGGDLSVALPDGLVPRGYPLLDMSAGLRVNTTNEMDTEMVISGGVTQHVEDLAKSGKAQKGGNGYSVRVDQNEMLCVNLP
GGNLCLYIRFVPQAPTVPMLPMMLSGSEMTGLAMSLIIVGLLALYISATIPKDWQENKQEEVQRIAQVVFTNPPPAPTPT
PTPPPPVPPTPPPQPVATPTPPPPKKVVVADANKEAQKKGTTGQQAQRAQVAARASEVAPKPNAKDRTKKFTSTRQGGAI
KTGNTAGANAQSSNKDLSKVGLFSAFGGGGSRANIDKAYSGAGEVLGMADKATGTAGFNEDRAGDDLGSKFKDAGAGGKG
TATQGIAGIGTKGRGSGQAAYGASEGFGSKTTVAIEGGGAEESFDATIDKEAIRRVIRSKLNEVKSCYERALNTLEKGKK
MEGKVILAWEIIERGQARNVKVVDSTLGNPGVEECIRRRLASWVFPEPPTGMTAEVQAYPFVLNQAN
>Mature_707_residues
MRSPLIFRIFKNNQLVGVKQFDQDQIVVGHNAEVHLDLDADGVSPIHCLIELRDNGWYVCDLGSSQGTFKNGQAVLDEAI
ASGDEIEVGPFRIAFFVGVPKPKVVPGAPASEAVAPVAEVPAPPPPKPEPSMPPAAVVKTEEIKVTPVIPAVTPSIPVEA
PKAEEKPVLTTAPVKPEIRKERSSYKKAKKSKTFAPPSEIQNLKSHLKPGKGTTVEVLVTWKERILTTYHFKGNKTIRVN
AGGDLSVALPDGLVPRGYPLLDMSAGLRVNTTNEMDTEMVISGGVTQHVEDLAKSGKAQKGGNGYSVRVDQNEMLCVNLP
GGNLCLYIRFVPQAPTVPMLPMMLSGSEMTGLAMSLIIVGLLALYISATIPKDWQENKQEEVQRIAQVVFTNPPPAPTPT
PTPPPPVPPTPPPQPVATPTPPPPKKVVVADANKEAQKKGTTGQQAQRAQVAARASEVAPKPNAKDRTKKFTSTRQGGAI
KTGNTAGANAQSSNKDLSKVGLFSAFGGGGSRANIDKAYSGAGEVLGMADKATGTAGFNEDRAGDDLGSKFKDAGAGGKG
TATQGIAGIGTKGRGSGQAAYGASEGFGSKTTVAIEGGGAEESFDATIDKEAIRRVIRSKLNEVKSCYERALNTLEKGKK
MEGKVILAWEIIERGQARNVKVVDSTLGNPGVEECIRRRLASWVFPEPPTGMTAEVQAYPFVLNQAN

Specific function: Unknown

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74791; Mature: 74791

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPLIFRIFKNNQLVGVKQFDQDQIVVGHNAEVHLDLDADGVSPIHCLIELRDNGWYVC
CCCCEEEEEECCCEEEEEEECCCCCEEECCCCEEEEEECCCCCCCEEEEEEEECCCEEEE
DLGSSQGTFKNGQAVLDEAIASGDEIEVGPFRIAFFVGVPKPKVVPGAPASEAVAPVAEV
ECCCCCCCCCCCHHHHHHHHCCCCCEEECCEEEEEEEECCCCCCCCCCCCHHHHCCHHHC
PAPPPPKPEPSMPPAAVVKTEEIKVTPVIPAVTPSIPVEAPKAEEKPVLTTAPVKPEIRK
CCCCCCCCCCCCCCHHEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHH
ERSSYKKAKKSKTFAPPSEIQNLKSHLKPGKGTTVEVLVTWKERILTTYHFKGNKTIRVN
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCCCEEEEE
AGGDLSVALPDGLVPRGYPLLDMSAGLRVNTTNEMDTEMVISGGVTQHVEDLAKSGKAQK
CCCCEEEECCCCCCCCCCCEEECCCCCEEECCCCCCCEEEEECCHHHHHHHHHHCCCCCC
GGNGYSVRVDQNEMLCVNLPGGNLCLYIRFVPQAPTVPMLPMMLSGSEMTGLAMSLIIVG
CCCCEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCCCHHEECCCCHHHHHHHHHHHH
LLALYISATIPKDWQENKQEEVQRIAQVVFTNPPPAPTPTPTPPPPVPPTPPPQPVATPT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPPPKKVVVADANKEAQKKGTTGQQAQRAQVAARASEVAPKPNAKDRTKKFTSTRQGGAI
CCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCE
KTGNTAGANAQSSNKDLSKVGLFSAFGGGGSRANIDKAYSGAGEVLGMADKATGTAGFNE
ECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCC
DRAGDDLGSKFKDAGAGGKGTATQGIAGIGTKGRGSGQAAYGASEGFGSKTTVAIEGGGA
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
EESFDATIDKEAIRRVIRSKLNEVKSCYERALNTLEKGKKMEGKVILAWEIIERGQARNV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCE
KVVDSTLGNPGVEECIRRRLASWVFPEPPTGMTAEVQAYPFVLNQAN
EEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCC
>Mature Secondary Structure
MRSPLIFRIFKNNQLVGVKQFDQDQIVVGHNAEVHLDLDADGVSPIHCLIELRDNGWYVC
CCCCEEEEEECCCEEEEEEECCCCCEEECCCCEEEEEECCCCCCCEEEEEEEECCCEEEE
DLGSSQGTFKNGQAVLDEAIASGDEIEVGPFRIAFFVGVPKPKVVPGAPASEAVAPVAEV
ECCCCCCCCCCCHHHHHHHHCCCCCEEECCEEEEEEEECCCCCCCCCCCCHHHHCCHHHC
PAPPPPKPEPSMPPAAVVKTEEIKVTPVIPAVTPSIPVEAPKAEEKPVLTTAPVKPEIRK
CCCCCCCCCCCCCCHHEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHH
ERSSYKKAKKSKTFAPPSEIQNLKSHLKPGKGTTVEVLVTWKERILTTYHFKGNKTIRVN
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCCCEEEEE
AGGDLSVALPDGLVPRGYPLLDMSAGLRVNTTNEMDTEMVISGGVTQHVEDLAKSGKAQK
CCCCEEEECCCCCCCCCCCEEECCCCCEEECCCCCCCEEEEECCHHHHHHHHHHCCCCCC
GGNGYSVRVDQNEMLCVNLPGGNLCLYIRFVPQAPTVPMLPMMLSGSEMTGLAMSLIIVG
CCCCEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCCCHHEECCCCHHHHHHHHHHHH
LLALYISATIPKDWQENKQEEVQRIAQVVFTNPPPAPTPTPTPPPPVPPTPPPQPVATPT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPPPKKVVVADANKEAQKKGTTGQQAQRAQVAARASEVAPKPNAKDRTKKFTSTRQGGAI
CCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCE
KTGNTAGANAQSSNKDLSKVGLFSAFGGGGSRANIDKAYSGAGEVLGMADKATGTAGFNE
ECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCC
DRAGDDLGSKFKDAGAGGKGTATQGIAGIGTKGRGSGQAAYGASEGFGSKTTVAIEGGGA
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
EESFDATIDKEAIRRVIRSKLNEVKSCYERALNTLEKGKKMEGKVILAWEIIERGQARNV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCE
KVVDSTLGNPGVEECIRRRLASWVFPEPPTGMTAEVQAYPFVLNQAN
EEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA