Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

Click here to switch to the map view.

The map label for this gene is 42522394

Identifier: 42522394

GI number: 42522394

Start: 767874

End: 768557

Strand: Direct

Name: 42522394

Synonym: Bd0818

Alternate gene names: NA

Gene position: 767874-768557 (Clockwise)

Preceding gene: 42522391

Following gene: 42522395

Centisome position: 20.3

GC content: 50.88

Gene sequence:

>684_bases
ATGTTGGATTTTTCTGTTCTTAACTCATCATTTGCCAACCCGACGTGGATTTCTATCATCTATGCTTTTTTGCTTAGTTT
TATTCTGGGGACGGCCTTGGCCGTGGCCTATGTGAGGACCTTCCGCGGTCTTTCTTATTCATTGAACTTCCTGCATGGCC
TGGTGCTGTTGCCGATTGTAATTGCTATTGCGATGCAGGCCATTGGAGACAATGTCGCTCGTGGTATCGGCATGATTGGA
GCGTTGTCTTTGCTGCGGTTTCGCACGAACGTCAAAGATCCGAGGGACATGTTCTTTATTTTTGCCTCGCTGGCGGTGGG
CCTGGCTTCCGGGGTTCATGCCTATGGTATCGCCATTTTAGGAACCGTCTGCTTTATTCTGGCTTTGACTGTTCTGCAGA
AGTCTCCCTTCGCTGCAGGTCCGCAGTTTGACGGTCTTTTGCGCCTGAATCTGTCCAGATCCGGTCAGGATCAGCGTGAA
GTGGAAGGGGTGCTGGAAAAATCCTGCCGGCATTTCGCACTGGCCACCATCCGGGAAATGGGCCAGGGGGAGCGGTTGGA
TTTTTCCTATCAGGTGCGCTTAAAGCCTCGTCAAACCTCGGCGGAACTTGTGGAAGAGCTGGGTCGTATTTCTTCTGTGC
GTGGCCTGAACTTTATGAATCAAGAATCTGTGATCGAGGTGTAA

Upstream 100 bases:

>100_bases
AAAGGGCAATTAAGTCTTCGTCATTCTGTTTTATTTTGGTTGTGATCAAGGGGTAAAGGCTGACAATGATCGTCTTTTAG
CCAGCTTCCGGGGGAAGAGT

Downstream 100 bases:

>100_bases
AGTGAAACTAGGTGACGTCGTCGGGACCGAGAACCGTTTTCTGTTGGGCTGCTGGAGTGTGGCCGTGGTTCTGGTATTGA
TGCTGGGACTGGTGCTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MLDFSVLNSSFANPTWISIIYAFLLSFILGTALAVAYVRTFRGLSYSLNFLHGLVLLPIVIAIAMQAIGDNVARGIGMIG
ALSLLRFRTNVKDPRDMFFIFASLAVGLASGVHAYGIAILGTVCFILALTVLQKSPFAAGPQFDGLLRLNLSRSGQDQRE
VEGVLEKSCRHFALATIREMGQGERLDFSYQVRLKPRQTSAELVEELGRISSVRGLNFMNQESVIEV

Sequences:

>Translated_227_residues
MLDFSVLNSSFANPTWISIIYAFLLSFILGTALAVAYVRTFRGLSYSLNFLHGLVLLPIVIAIAMQAIGDNVARGIGMIG
ALSLLRFRTNVKDPRDMFFIFASLAVGLASGVHAYGIAILGTVCFILALTVLQKSPFAAGPQFDGLLRLNLSRSGQDQRE
VEGVLEKSCRHFALATIREMGQGERLDFSYQVRLKPRQTSAELVEELGRISSVRGLNFMNQESVIEV
>Mature_227_residues
MLDFSVLNSSFANPTWISIIYAFLLSFILGTALAVAYVRTFRGLSYSLNFLHGLVLLPIVIAIAMQAIGDNVARGIGMIG
ALSLLRFRTNVKDPRDMFFIFASLAVGLASGVHAYGIAILGTVCFILALTVLQKSPFAAGPQFDGLLRLNLSRSGQDQRE
VEGVLEKSCRHFALATIREMGQGERLDFSYQVRLKPRQTSAELVEELGRISSVRGLNFMNQESVIEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24907; Mature: 24907

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDFSVLNSSFANPTWISIIYAFLLSFILGTALAVAYVRTFRGLSYSLNFLHGLVLLPIV
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
IAIAMQAIGDNVARGIGMIGALSLLRFRTNVKDPRDMFFIFASLAVGLASGVHAYGIAIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTVCFILALTVLQKSPFAAGPQFDGLLRLNLSRSGQDQREVEGVLEKSCRHFALATIREM
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GQGERLDFSYQVRLKPRQTSAELVEELGRISSVRGLNFMNQESVIEV
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure
MLDFSVLNSSFANPTWISIIYAFLLSFILGTALAVAYVRTFRGLSYSLNFLHGLVLLPIV
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
IAIAMQAIGDNVARGIGMIGALSLLRFRTNVKDPRDMFFIFASLAVGLASGVHAYGIAIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTVCFILALTVLQKSPFAAGPQFDGLLRLNLSRSGQDQREVEGVLEKSCRHFALATIREM
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GQGERLDFSYQVRLKPRQTSAELVEELGRISSVRGLNFMNQESVIEV
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA