| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is tcmJ
Identifier: 42522373
GI number: 42522373
Start: 747308
End: 747685
Strand: Direct
Name: tcmJ
Synonym: Bd0797
Alternate gene names: NA
Gene position: 747308-747685 (Clockwise)
Preceding gene: 42522372
Following gene: 42522376
Centisome position: 19.75
GC content: 47.88
Gene sequence:
>378_bases ATGGAAATAAATAGATTAGCCGATCGAAGTTTTCGTCAGTTGACGTCGTCGAAGACGGGTGAGGAGTTTTCCTTGTCGGC GGTGATCTCAGGTGCTTTGGGGGCTCAGGGGCTTTTTATTTCTCATGAGATATTGGAGCCTGGGAAGTCTTCATCGGCGC CTCACTTTCATAACGGCACGGATGAAGTGGTTTTCGTTACCAAAGGCAGTGTCGTTGCCAAGGAAGGTTCCGAAGAGCTG ATCTTGCTGGTCGGTGACAGTGCTTGCTTTAAGGCTCAAAGTGGGTTGCCACATTTTATTTCTAATCAATCCAGTGAGGT GGCCGAGTTTGTTCTGATTCGTTCTCGTCTTGACCAATCCGATGTCGTTTATGGCTAA
Upstream 100 bases:
>100_bases TTGGGGTGGCTTTGGGGGACTGGCTCAAAAGCTCGCCTTTGGCGGGCTTTTTTGCGTTTTGGGAGAGAGTGTTCGTAAGT TTTTTATTGAGGATACTTAG
Downstream 100 bases:
>100_bases AAGGCCCGTTGCGCAAGTTGTGCAACGAGCCCTTTCGTTAGTCTAATCCCAATTTGGCGGCGATGCGGCCGCCATAATCC GGATCGCATCTCTTGAAGTG
Product: polyketide synthase curC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MEINRLADRSFRQLTSSKTGEEFSLSAVISGALGAQGLFISHEILEPGKSSSAPHFHNGTDEVVFVTKGSVVAKEGSEEL ILLVGDSACFKAQSGLPHFISNQSSEVAEFVLIRSRLDQSDVVYG
Sequences:
>Translated_125_residues MEINRLADRSFRQLTSSKTGEEFSLSAVISGALGAQGLFISHEILEPGKSSSAPHFHNGTDEVVFVTKGSVVAKEGSEEL ILLVGDSACFKAQSGLPHFISNQSSEVAEFVLIRSRLDQSDVVYG >Mature_125_residues MEINRLADRSFRQLTSSKTGEEFSLSAVISGALGAQGLFISHEILEPGKSSSAPHFHNGTDEVVFVTKGSVVAKEGSEEL ILLVGDSACFKAQSGLPHFISNQSSEVAEFVLIRSRLDQSDVVYG
Specific function: Unknown
COG id: COG3837
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13400; Mature: 13400
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEINRLADRSFRQLTSSKTGEEFSLSAVISGALGAQGLFISHEILEPGKSSSAPHFHNGT CCCHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCCCC DEVVFVTKGSVVAKEGSEELILLVGDSACFKAQSGLPHFISNQSSEVAEFVLIRSRLDQS CCEEEEECCCEEEECCCCEEEEEECCCHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCC DVVYG CCCCC >Mature Secondary Structure MEINRLADRSFRQLTSSKTGEEFSLSAVISGALGAQGLFISHEILEPGKSSSAPHFHNGT CCCHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCCCC DEVVFVTKGSVVAKEGSEELILLVGDSACFKAQSGLPHFISNQSSEVAEFVLIRSRLDQS CCEEEEECCCEEEECCCCEEEEEECCCHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCC DVVYG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA