Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522364

Identifier: 42522364

GI number: 42522364

Start: 740156

End: 740500

Strand: Direct

Name: 42522364

Synonym: Bd0785

Alternate gene names: NA

Gene position: 740156-740500 (Clockwise)

Preceding gene: 42522363

Following gene: 42522367

Centisome position: 19.57

GC content: 53.33

Gene sequence:

>345_bases
ATGGATTTGTTATCTTTGGTGGAAGCCCAGAAGTCTTTGGATGCGTTGCTGAAGTGTCCGGGTTTGCGTTGTGTGCTGGA
TGCCTTCGCCGTGGATCTGTCTAAAAATACCAGGGAAGACATTTACGTGTATCTGAAGGACGGCGGCAGCCCACAGGTGC
AGCGACTTTGTCTGCCAATGGAACGCCCGCGCAGAGCGGAAGCCAATGAAGTTTGTTATATGGTGAAACTAAAGCGCGCC
GGAGAAACGCAGGTGCTTTGGCGCAACGAACGGGGTCAGTGGAAGCTCAGCAACGCCTCTAAAAGGCCTCTCACGGCGGG
TGAAAAGGCCCCTTCCGGTAAATAA

Upstream 100 bases:

>100_bases
AGTGTCGAAAGGTGGCTAAGGCCCCTGTGGGATCTTATGGCTCGGGTAAATCCCCAGCGGTAAAATCCTCGACGGGTAAA
AGCGGGAAGGGGACACGCTA

Downstream 100 bases:

>100_bases
CGACTACAGAAGGCGAAGTTGTTCGCCGACCAGTTTTTTCAGATTTTCGACGTAACCCATGTACTCTTCCATGTCCAGGC
GCTCGTCTTTGCGGATGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MDLLSLVEAQKSLDALLKCPGLRCVLDAFAVDLSKNTREDIYVYLKDGGSPQVQRLCLPMERPRRAEANEVCYMVKLKRA
GETQVLWRNERGQWKLSNASKRPLTAGEKAPSGK

Sequences:

>Translated_114_residues
MDLLSLVEAQKSLDALLKCPGLRCVLDAFAVDLSKNTREDIYVYLKDGGSPQVQRLCLPMERPRRAEANEVCYMVKLKRA
GETQVLWRNERGQWKLSNASKRPLTAGEKAPSGK
>Mature_114_residues
MDLLSLVEAQKSLDALLKCPGLRCVLDAFAVDLSKNTREDIYVYLKDGGSPQVQRLCLPMERPRRAEANEVCYMVKLKRA
GETQVLWRNERGQWKLSNASKRPLTAGEKAPSGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12820; Mature: 12820

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLSLVEAQKSLDALLKCPGLRCVLDAFAVDLSKNTREDIYVYLKDGGSPQVQRLCLPM
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHCCC
ERPRRAEANEVCYMVKLKRAGETQVLWRNERGQWKLSNASKRPLTAGEKAPSGK
CCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLLSLVEAQKSLDALLKCPGLRCVLDAFAVDLSKNTREDIYVYLKDGGSPQVQRLCLPM
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHCCC
ERPRRAEANEVCYMVKLKRAGETQVLWRNERGQWKLSNASKRPLTAGEKAPSGK
CCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA