| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is phoH [H]
Identifier: 42522344
GI number: 42522344
Start: 721971
End: 723314
Strand: Direct
Name: phoH [H]
Synonym: Bd0761
Alternate gene names: 42522344
Gene position: 721971-723314 (Clockwise)
Preceding gene: 42522343
Following gene: 42522345
Centisome position: 19.08
GC content: 49.7
Gene sequence:
>1344_bases ATGGACTATAACTACGGAGGGTGTCCATTGAGCAAAGCTAAACGCAGAAAAATTGTTGTCGATACGAACGTGATCCTTTT CGATTCCCAGGCGATCCTGCGATTTGGTGAGGCCGACGTTCATATTCCTATTTCTGTCATCGAGGAAGTCGACAAGTTCA AGCGTGATCAGGGTGAAAACGGCCGAAATGCGCGTCAGTTCAGCCGCTTTATCGACGTTCTGCGCTCCAAGGGCTCTTTG GCCAGTGGTGTCCAGATCGACAACTCCGAAACCATGGTTTACATCAACACCGATCTGATGCTGGCCGGTATGCCGTCAGA GCTGGATCATCAGAAGGCGGACAACCGCATCCTGAACACCGCTTTGGCTTTGCAAAAGCAGCACCCGCGCTACAAAGTTG AGCTGATCACCAAAGACATCAATCTGCGCATCAAGGCCGACGTTTACGGTGTTGTTGCCAATGACTATGATGCCAACGAC ATCAACCGTGATGATCTTTACGAAGGTTATCAGGAGATCATGGTGTCTCCGGAACAGATCGACGCTTTCTATCGCGAAAA ACGTTTCATCACGGACGTTAAACTTTACGGCAATCAGTATGTGATCATGAAAGATGCGGGGAACCCGAATCATTCGGCGA TCGGCCGCTACAGTTTGGCGGATAAAGCCATTGTTCCTTTGATGCAGGCCGCTGATTCCATCTGGGGTATTCATGCACGA AATGTCGAGCAAGCCTTCGCATTGGACTGTTTGCTGAATGATGAAATCATGTTTGTTTCCCTGGTGGGTAAAGCCGGTAC GGGTAAAACATTGATGGCGATTGCTGCGGGTCTTCATAAAACTTTGGATCAGGGGCAGTTCCAGCGTTTGCTGGTGTCTC GTCCGATTTTCCCAATGGGGCGCGATATCGGTTATCTTCCTGGTGACATCGAGCAGAAATTGAATCCTTGGATGCAGCCT ATCTTCGATAACGTCGAGTTTTTGATGGGTGCGGACAAAAAGGCTGCAGGACGTGCGCAAGAGTTGATCAATCAGGGGAT GCTGAACATTGAGCCGCTGACTTACATTCGCGGTCGCAGCATTCCGAAGCAATACCTGATCGTCGATGAAGCACAAAACT TGACTCCGCACGAGATCAAGACAATTGTTACGCGTGCCGGTCGTGGGACGAAGGTTGTCCTCACGGGCGACGTCTATCAG ATCGATAATCCTTATGTGGATTCCGCGAACAGTGGTTTAACTTATGCGGTAGAGAGATTCAAAGGCCATCCAATTGCGGC CCATGTGACTCTGACAAAAGGTGAAAGATCTGAGCTGGCCGAGCTGGCAGCAAATATCTTGTAG
Upstream 100 bases:
>100_bases CCTTTTTATTTTTTGGGACGCCGTTTTGCGTGGACTTTGGTCCTGCGATTTGTTGCAATTTAGCTGTGGAGTATCTGCAG CTTTCGAGCCGGCAGATCGC
Downstream 100 bases:
>100_bases GTTTTTAGGAGTTTTTTCATGGCTGAAGTGATTGATGTAGGATTTGAAGCAAAGGTAACTGTGCAAGTGACGGATAAAAT GATCCAGCAATTTGCGGAGC
Product: PhoH-like ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MDYNYGGCPLSKAKRRKIVVDTNVILFDSQAILRFGEADVHIPISVIEEVDKFKRDQGENGRNARQFSRFIDVLRSKGSL ASGVQIDNSETMVYINTDLMLAGMPSELDHQKADNRILNTALALQKQHPRYKVELITKDINLRIKADVYGVVANDYDAND INRDDLYEGYQEIMVSPEQIDAFYREKRFITDVKLYGNQYVIMKDAGNPNHSAIGRYSLADKAIVPLMQAADSIWGIHAR NVEQAFALDCLLNDEIMFVSLVGKAGTGKTLMAIAAGLHKTLDQGQFQRLLVSRPIFPMGRDIGYLPGDIEQKLNPWMQP IFDNVEFLMGADKKAAGRAQELINQGMLNIEPLTYIRGRSIPKQYLIVDEAQNLTPHEIKTIVTRAGRGTKVVLTGDVYQ IDNPYVDSANSGLTYAVERFKGHPIAAHVTLTKGERSELAELAANIL
Sequences:
>Translated_447_residues MDYNYGGCPLSKAKRRKIVVDTNVILFDSQAILRFGEADVHIPISVIEEVDKFKRDQGENGRNARQFSRFIDVLRSKGSL ASGVQIDNSETMVYINTDLMLAGMPSELDHQKADNRILNTALALQKQHPRYKVELITKDINLRIKADVYGVVANDYDAND INRDDLYEGYQEIMVSPEQIDAFYREKRFITDVKLYGNQYVIMKDAGNPNHSAIGRYSLADKAIVPLMQAADSIWGIHAR NVEQAFALDCLLNDEIMFVSLVGKAGTGKTLMAIAAGLHKTLDQGQFQRLLVSRPIFPMGRDIGYLPGDIEQKLNPWMQP IFDNVEFLMGADKKAAGRAQELINQGMLNIEPLTYIRGRSIPKQYLIVDEAQNLTPHEIKTIVTRAGRGTKVVLTGDVYQ IDNPYVDSANSGLTYAVERFKGHPIAAHVTLTKGERSELAELAANIL >Mature_447_residues MDYNYGGCPLSKAKRRKIVVDTNVILFDSQAILRFGEADVHIPISVIEEVDKFKRDQGENGRNARQFSRFIDVLRSKGSL ASGVQIDNSETMVYINTDLMLAGMPSELDHQKADNRILNTALALQKQHPRYKVELITKDINLRIKADVYGVVANDYDAND INRDDLYEGYQEIMVSPEQIDAFYREKRFITDVKLYGNQYVIMKDAGNPNHSAIGRYSLADKAIVPLMQAADSIWGIHAR NVEQAFALDCLLNDEIMFVSLVGKAGTGKTLMAIAAGLHKTLDQGQFQRLLVSRPIFPMGRDIGYLPGDIEQKLNPWMQP IFDNVEFLMGADKKAAGRAQELINQGMLNIEPLTYIRGRSIPKQYLIVDEAQNLTPHEIKTIVTRAGRGTKVVLTGDVYQ IDNPYVDSANSGLTYAVERFKGHPIAAHVTLTKGERSELAELAANIL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=182, Percent_Identity=37.9120879120879, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1787257, Length=189, Percent_Identity=35.4497354497354, Blast_Score=114, Evalue=9e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 50006; Mature: 50006
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYNYGGCPLSKAKRRKIVVDTNVILFDSQAILRFGEADVHIPISVIEEVDKFKRDQGEN CCCCCCCCCCCHHCCCEEEEECCEEEECCHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCC GRNARQFSRFIDVLRSKGSLASGVQIDNSETMVYINTDLMLAGMPSELDHQKADNRILNT CCCHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHH ALALQKQHPRYKVELITKDINLRIKADVYGVVANDYDANDINRDDLYEGYQEIMVSPEQI HHHHHHCCCCEEEEEEEECCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHH DAFYREKRFITDVKLYGNQYVIMKDAGNPNHSAIGRYSLADKAIVPLMQAADSIWGIHAR HHHHHHHHHEEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC NVEQAFALDCLLNDEIMFVSLVGKAGTGKTLMAIAAGLHKTLDQGQFQRLLVSRPIFPMG CHHHHHHHHHEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RDIGYLPGDIEQKLNPWMQPIFDNVEFLMGADKKAAGRAQELINQGMLNIEPLTYIRGRS CCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEECCCC IPKQYLIVDEAQNLTPHEIKTIVTRAGRGTKVVLTGDVYQIDNPYVDSANSGLTYAVERF CCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCHHHHHHHH KGHPIAAHVTLTKGERSELAELAANIL CCCCEEEEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure MDYNYGGCPLSKAKRRKIVVDTNVILFDSQAILRFGEADVHIPISVIEEVDKFKRDQGEN CCCCCCCCCCCHHCCCEEEEECCEEEECCHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCC GRNARQFSRFIDVLRSKGSLASGVQIDNSETMVYINTDLMLAGMPSELDHQKADNRILNT CCCHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHH ALALQKQHPRYKVELITKDINLRIKADVYGVVANDYDANDINRDDLYEGYQEIMVSPEQI HHHHHHCCCCEEEEEEEECCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHH DAFYREKRFITDVKLYGNQYVIMKDAGNPNHSAIGRYSLADKAIVPLMQAADSIWGIHAR HHHHHHHHHEEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC NVEQAFALDCLLNDEIMFVSLVGKAGTGKTLMAIAAGLHKTLDQGQFQRLLVSRPIFPMG CHHHHHHHHHEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RDIGYLPGDIEQKLNPWMQPIFDNVEFLMGADKKAAGRAQELINQGMLNIEPLTYIRGRS CCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEECCCC IPKQYLIVDEAQNLTPHEIKTIVTRAGRGTKVVLTGDVYQIDNPYVDSANSGLTYAVERF CCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCHHHHHHHH KGHPIAAHVTLTKGERSELAELAANIL CCCCEEEEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]