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The map label for this gene is irpA [H]

Identifier: 42522171

GI number: 42522171

Start: 532495

End: 533580

Strand: Direct

Name: irpA [H]

Synonym: Bd0575

Alternate gene names: 42522171

Gene position: 532495-533580 (Clockwise)

Preceding gene: 42522170

Following gene: 42522172

Centisome position: 14.08

GC content: 50.28

Gene sequence:

>1086_bases
ATGAAAGCTCTTAAAATGATGTTGGCAGCAGTGGCGTTCGCCGGTGCGACGGCCCAAGCTGCAACCAACAAAGAAATCAT
CAATCATGTTTCTTACAACGTGATTCTTGCGACTTACAACGACCTGGCGACTAAAACTGCGGAATTGTCTGCAGCAGTTG
ACGCTTTGGCAGCCAGCACCAATCAGGAAAACCTGGATAAAGCTCAGGCCGCTTGGCGCGCAGCTCGTATTCCTTGGGAA
AGCTCTGAATCCTTCCTGTTCGGTCCGGTGGATTCTTTGGGTATCGATCCTTTGTTAGACACTTGGCCTTTGAATAAGTT
GGATTTGGACTCTGTTATGTCCTCCAACCGCAAGATCACTGTGGATCTGGTGCGTGCACTGGGGACCAACCTGCAGGGTT
TCCACACTTTGGAATATCTGCTGTTCGGTGACGGCAAAGTTTCCAACACAAAACCAGCAGCTTCTTTGACTGCAAAACAA
CTTGAGTACTTGAAAGCAAGTGCACAGCTTTTGGCTGAACACACGGCGGAACTGGCTCACGCCTGGACGACGAACTATGA
TCCGGAAAACCCGGCGGCTCCAGGTTACGTAAAAGTGATCAGCACTCCGGGCTTGAACAATGAATTCTACTCTTCTGAAA
GAGCCGTCATGGAAGAATTCGTTCAAGGCATGATGGGTATCGTTGACGAAGTTGCCAACGGTAAAATGTCTGACCCAATG
GGCGCGGACATCGGCTCTGCGAACATGGCGTTGGTTGAATCTCCATTTGCCTGGAATTCTTTGAAAGACTTCCAGCACAA
CATCCGTTCCGTTTACAGCATCTACACTGGCCACTACAAAAACAACAAAGGCCCGGGCGTAAAAGCCTTGGTTGAAAAAG
TGGATGCGTCCTTGGCAGCTCGTGTTGAAGCTGACATCCTGAATTGCATCGCTTTGATCGAAGCGATCCGTCCAGCAGGT
GGTGGTGACTTCGGTCAGGCGATCTTCACTAAAGACGGCCGTGCCCGCACTCAGGCGGCAATTGAAGCTCTGAACGCACT
TCACGCAACACTGGAGTCTGAAGTTCTTCCGACTCTGGACATGTAA

Upstream 100 bases:

>100_bases
GTTTGCCTGAAACCTACCAGGCCAACGTGGCCTTCGGTTTCGATCTGTCCGCTTTTGAAAAGTAATTTAAATTTTTTATT
AACAACCAAGGAGACTTAAA

Downstream 100 bases:

>100_bases
TCGGGAAATATATGAAGGCTTGGATTGTACTGACTGTTTTGAATTTGATGGCAGGGGCGGCGACAGCTGCTCCTCAAATT
GACATGGACTATGTTCACGC

Product: Iron-regulated protein A precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKALKMMLAAVAFAGATAQAATNKEIINHVSYNVILATYNDLATKTAELSAAVDALAASTNQENLDKAQAAWRAARIPWE
SSESFLFGPVDSLGIDPLLDTWPLNKLDLDSVMSSNRKITVDLVRALGTNLQGFHTLEYLLFGDGKVSNTKPAASLTAKQ
LEYLKASAQLLAEHTAELAHAWTTNYDPENPAAPGYVKVISTPGLNNEFYSSERAVMEEFVQGMMGIVDEVANGKMSDPM
GADIGSANMALVESPFAWNSLKDFQHNIRSVYSIYTGHYKNNKGPGVKALVEKVDASLAARVEADILNCIALIEAIRPAG
GGDFGQAIFTKDGRARTQAAIEALNALHATLESEVLPTLDM

Sequences:

>Translated_361_residues
MKALKMMLAAVAFAGATAQAATNKEIINHVSYNVILATYNDLATKTAELSAAVDALAASTNQENLDKAQAAWRAARIPWE
SSESFLFGPVDSLGIDPLLDTWPLNKLDLDSVMSSNRKITVDLVRALGTNLQGFHTLEYLLFGDGKVSNTKPAASLTAKQ
LEYLKASAQLLAEHTAELAHAWTTNYDPENPAAPGYVKVISTPGLNNEFYSSERAVMEEFVQGMMGIVDEVANGKMSDPM
GADIGSANMALVESPFAWNSLKDFQHNIRSVYSIYTGHYKNNKGPGVKALVEKVDASLAARVEADILNCIALIEAIRPAG
GGDFGQAIFTKDGRARTQAAIEALNALHATLESEVLPTLDM
>Mature_361_residues
MKALKMMLAAVAFAGATAQAATNKEIINHVSYNVILATYNDLATKTAELSAAVDALAASTNQENLDKAQAAWRAARIPWE
SSESFLFGPVDSLGIDPLLDTWPLNKLDLDSVMSSNRKITVDLVRALGTNLQGFHTLEYLLFGDGKVSNTKPAASLTAKQ
LEYLKASAQLLAEHTAELAHAWTTNYDPENPAAPGYVKVISTPGLNNEFYSSERAVMEEFVQGMMGIVDEVANGKMSDPM
GADIGSANMALVESPFAWNSLKDFQHNIRSVYSIYTGHYKNNKGPGVKALVEKVDASLAARVEADILNCIALIEAIRPAG
GGDFGQAIFTKDGRARTQAAIEALNALHATLESEVLPTLDM

Specific function: IrpA occurs under iron-deficient growth conditions in cyanobacterium Synechococcus and disappears in cells recovering from iron starvation. It seems to be involved in iron acquisition, uptake or storage [H]

COG id: COG3487

COG function: function code P; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018976 [H]

Pfam domain/function: PF09375 Peptidase_M75 [H]

EC number: NA

Molecular weight: Translated: 38779; Mature: 38779

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALKMMLAAVAFAGATAQAATNKEIINHVSYNVILATYNDLATKTAELSAAVDALAAST
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHCC
NQENLDKAQAAWRAARIPWESSESFLFGPVDSLGIDPLLDTWPLNKLDLDSVMSSNRKIT
CHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCH
VDLVRALGTNLQGFHTLEYLLFGDGKVSNTKPAASLTAKQLEYLKASAQLLAEHTAELAH
HHHHHHHCCCCCHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWTTNYDPENPAAPGYVKVISTPGLNNEFYSSERAVMEEFVQGMMGIVDEVANGKMSDPM
HHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GADIGSANMALVESPFAWNSLKDFQHNIRSVYSIYTGHYKNNKGPGVKALVEKVDASLAA
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
RVEADILNCIALIEAIRPAGGGDFGQAIFTKDGRARTQAAIEALNALHATLESEVLPTLD
HHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
M
C
>Mature Secondary Structure
MKALKMMLAAVAFAGATAQAATNKEIINHVSYNVILATYNDLATKTAELSAAVDALAAST
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHCC
NQENLDKAQAAWRAARIPWESSESFLFGPVDSLGIDPLLDTWPLNKLDLDSVMSSNRKIT
CHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCH
VDLVRALGTNLQGFHTLEYLLFGDGKVSNTKPAASLTAKQLEYLKASAQLLAEHTAELAH
HHHHHHHCCCCCHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWTTNYDPENPAAPGYVKVISTPGLNNEFYSSERAVMEEFVQGMMGIVDEVANGKMSDPM
HHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GADIGSANMALVESPFAWNSLKDFQHNIRSVYSIYTGHYKNNKGPGVKALVEKVDASLAA
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
RVEADILNCIALIEAIRPAGGGDFGQAIFTKDGRARTQAAIEALNALHATLESEVLPTLD
HHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
M
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3139627 [H]