Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522106

Identifier: 42522106

GI number: 42522106

Start: 467826

End: 468413

Strand: Direct

Name: 42522106

Synonym: Bd0500

Alternate gene names: NA

Gene position: 467826-468413 (Clockwise)

Preceding gene: 42522105

Following gene: 42522110

Centisome position: 12.37

GC content: 52.55

Gene sequence:

>588_bases
ATGACTAAACGTTTGGCACTGCTGACCGGGACCGTGTGTCTCATTCTGGGATTCCAGAACTGCAGTCAGAACTCGCTTCA
GACATCTGAAATGGCATCATTGAATGATGTTTCTGTGGCTCTTCCACCATCCGGTGGTGGTGAATCTGCCAGCACGCCGG
CGAAAGTCACCTATGTTGAAATTCCCAATGTATCAGACTCTGTCGTTGAAGGGCTTGCTGCCAAAGCCAGCGAGCTGGGT
CAGTATCGACTGGTGATTGCGACCGACTCGGGCCGCATTCAGCTGGTGGATGAAGTGAATACTGTTATTCAGGAACGCTG
TCTGCCTGCGGGCAGCTTGTCAGAACTGAAAACGATCCTGAGCGGTTCTTCCGTGTGCGCGGCCCCGGTGAAAGAAGCAG
ACATGTGCGCGATGAGATACAAACCGGCCTATGCGTCTTTGTACGCCAATGAAACTCGGGTGAATCTGGGTGAAGAAAAG
GATTCCTGCGGGACAGGTCTGAAGGATCTGTGTGGAGGCCTGGCAGATGTGTTCCAGGCCTATGTTTCCCACGTTCGTAA
CAACTGGACAGCGATGAACTGCGAATAA

Upstream 100 bases:

>100_bases
AGCGTTAAGTTTCTAACAGCTTATCCCGATATTACGAAGGTCCGACCGCGGAACGGATCTTGCCTCTATTCATTATGAAA
CGGGCAAACAGGGGGAATTC

Downstream 100 bases:

>100_bases
GCAGATAAAAAAAGGGCCCTGAGGCCCTTTTTTTTGGTCTTAAAGACCCAGCATGGATTTCACTTTACTGAACGCTTCAT
TCAGCTGCGCACGGTTCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTKRLALLTGTVCLILGFQNCSQNSLQTSEMASLNDVSVALPPSGGGESASTPAKVTYVEIPNVSDSVVEGLAAKASELG
QYRLVIATDSGRIQLVDEVNTVIQERCLPAGSLSELKTILSGSSVCAAPVKEADMCAMRYKPAYASLYANETRVNLGEEK
DSCGTGLKDLCGGLADVFQAYVSHVRNNWTAMNCE

Sequences:

>Translated_195_residues
MTKRLALLTGTVCLILGFQNCSQNSLQTSEMASLNDVSVALPPSGGGESASTPAKVTYVEIPNVSDSVVEGLAAKASELG
QYRLVIATDSGRIQLVDEVNTVIQERCLPAGSLSELKTILSGSSVCAAPVKEADMCAMRYKPAYASLYANETRVNLGEEK
DSCGTGLKDLCGGLADVFQAYVSHVRNNWTAMNCE
>Mature_194_residues
TKRLALLTGTVCLILGFQNCSQNSLQTSEMASLNDVSVALPPSGGGESASTPAKVTYVEIPNVSDSVVEGLAAKASELGQ
YRLVIATDSGRIQLVDEVNTVIQERCLPAGSLSELKTILSGSSVCAAPVKEADMCAMRYKPAYASLYANETRVNLGEEKD
SCGTGLKDLCGGLADVFQAYVSHVRNNWTAMNCE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20604; Mature: 20472

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRLALLTGTVCLILGFQNCSQNSLQTSEMASLNDVSVALPPSGGGESASTPAKVTYVE
CCCCHHHHHHHHHEEEECCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEE
IPNVSDSVVEGLAAKASELGQYRLVIATDSGRIQLVDEVNTVIQERCLPAGSLSELKTIL
CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHH
SGSSVCAAPVKEADMCAMRYKPAYASLYANETRVNLGEEKDSCGTGLKDLCGGLADVFQA
CCCCEECCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
YVSHVRNNWTAMNCE
HHHHHHCCCEEECCC
>Mature Secondary Structure 
TKRLALLTGTVCLILGFQNCSQNSLQTSEMASLNDVSVALPPSGGGESASTPAKVTYVE
CCCHHHHHHHHHEEEECCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEE
IPNVSDSVVEGLAAKASELGQYRLVIATDSGRIQLVDEVNTVIQERCLPAGSLSELKTIL
CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHH
SGSSVCAAPVKEADMCAMRYKPAYASLYANETRVNLGEEKDSCGTGLKDLCGGLADVFQA
CCCCEECCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
YVSHVRNNWTAMNCE
HHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA