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The map label for this gene is tadC

Identifier: 42522078

GI number: 42522078

Start: 440047

End: 440823

Strand: Direct

Name: tadC

Synonym: Bd0470

Alternate gene names: NA

Gene position: 440047-440823 (Clockwise)

Preceding gene: 42522075

Following gene: 42522079

Centisome position: 11.63

GC content: 51.87

Gene sequence:

>777_bases
GTGAAATCCAAAAATCCGGTGATCAATTTCTCGCGACCACTGGTGCACCAGTTCACCTTGCAGCATGCGATGAAGATTCG
CAGCGAGTCCTACCGCAAAAAAGTTCGTAAATACATCAAAACCTCGGGCCTGTCTTCAGAGCTGAACGAGGATGAATTCA
TCGGGTTGCAGTTCCTGTGGGGGATCATGTTCCCGATCTTCCTGCTGATCATGAACTTCTCATTGCAGTTGGGTTTGTCC
CCGATGGTTGTTGTGGGTATGGGTCTGATTGGTTTCTATCTGCCGCAGATTCATGCGCGCGGGGAAAAGAAGCGCCGGGA
GCTTTCCGTGCGCGCGGACCTGCCGTTCTTCATCGATCTGCTGGCGCTGTCGGTGGAAGCGGGTCTGGACTTTTTCTCGG
CGATTCAGAAGATCGTGGACAAAGCCAATGGCACGGACAGTGTGCTGGCAGAAGAGTTTTCAATTGTTTTGAAAGATATC
AAAATCGGTTCCTCCAAAGCGCAGGCTTTGAAGGAAATGGCTGAGCGTTTGGACATGAACGAGATCACAAGTTTTGTGGC
GGTTCTGGTGGATGCCGAGTCCACGGGGGCCAGTATTTCCCAGGTCCTGAAAGACCAGTCAGTGCAGATGCGTCTGGAAA
GATTCGTTCGTGCTGAGAAAGCCGGTGCGCAGGCCTCCCAGACCATGTTGATCCCGCTGATGCTGTTCATTCTGCCAGCG
GTATTCATCATCGTCTTCGGTCCGGTAGCGGTTTCATTCATGTATGGTGGAAAGTAA

Upstream 100 bases:

>100_bases
ATTGCTGCTCGCAGGAGTTGCGGTCTTCCTTTTTGTCAGTTCCATCTTTGCAAGTAACACGGACAAGCAGCAGCTTTCAT
GGGCGAACAATGATGAGCCG

Downstream 100 bases:

>100_bases
AGTGATGGCTAAGTTGATGAACACAACCAACAACAAAACTTTGATTGCGGATCTGGAAGTGGCCTCCACTTTCCTGAGTC
GTGGCAAAGGTCTTTTGGGC

Product: Flp pilus assembly protein TadC

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Integral Membrane Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Type II Secretion System Protein F; Flp Pilus Assembly Protein; Pilus Assembly Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; Type II Secretion System; TadC Pilus Assembly Protein; TadC Family Type II/IV Secretion System Protein; Pilus Assembly Protein TadC; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Type II Secretion System Protein F Domain Protein; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Tight Adherence TadC-Related Transmembrane Protein; Component Of Type IV Pilus; Von Willebrand Factor Type A; Component Of Pilus Protein; Type II Secretion System Integral Membrane Subunit; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Transmembrane Pilus Component Protein; Fimbriae-Related Membrane Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKSKNPVINFSRPLVHQFTLQHAMKIRSESYRKKVRKYIKTSGLSSELNEDEFIGLQFLWGIMFPIFLLIMNFSLQLGLS
PMVVVGMGLIGFYLPQIHARGEKKRRELSVRADLPFFIDLLALSVEAGLDFFSAIQKIVDKANGTDSVLAEEFSIVLKDI
KIGSSKAQALKEMAERLDMNEITSFVAVLVDAESTGASISQVLKDQSVQMRLERFVRAEKAGAQASQTMLIPLMLFILPA
VFIIVFGPVAVSFMYGGK

Sequences:

>Translated_258_residues
MKSKNPVINFSRPLVHQFTLQHAMKIRSESYRKKVRKYIKTSGLSSELNEDEFIGLQFLWGIMFPIFLLIMNFSLQLGLS
PMVVVGMGLIGFYLPQIHARGEKKRRELSVRADLPFFIDLLALSVEAGLDFFSAIQKIVDKANGTDSVLAEEFSIVLKDI
KIGSSKAQALKEMAERLDMNEITSFVAVLVDAESTGASISQVLKDQSVQMRLERFVRAEKAGAQASQTMLIPLMLFILPA
VFIIVFGPVAVSFMYGGK
>Mature_258_residues
MKSKNPVINFSRPLVHQFTLQHAMKIRSESYRKKVRKYIKTSGLSSELNEDEFIGLQFLWGIMFPIFLLIMNFSLQLGLS
PMVVVGMGLIGFYLPQIHARGEKKRRELSVRADLPFFIDLLALSVEAGLDFFSAIQKIVDKANGTDSVLAEEFSIVLKDI
KIGSSKAQALKEMAERLDMNEITSFVAVLVDAESTGASISQVLKDQSVQMRLERFVRAEKAGAQASQTMLIPLMLFILPA
VFIIVFGPVAVSFMYGGK

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28801; Mature: 28801

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA