| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522023
Identifier: 42522023
GI number: 42522023
Start: 385826
End: 386065
Strand: Direct
Name: 42522023
Synonym: Bd0409
Alternate gene names: NA
Gene position: 385826-386065 (Clockwise)
Preceding gene: 42522022
Following gene: 42522024
Centisome position: 10.2
GC content: 40.0
Gene sequence:
>240_bases GTGACTTTGTCCGCCATTTTTCAAAGCTGCATTTTTCTGTCGCAGCGACCGAATTTTCAAAAAGTTTTTCCTCAGCAAAA AATAGAAAAGAAAAGACAAAAACTGGACTCGAGCAGTTGTATTATTTTTCCGAAAAGTAAGCAGGGAACTGTATCGCAAG TTCCGAATATTAATTTTACAGGTGCACGGATCGCGCCTTATGCCAATGGATGGCACACTTTCACGGAGGAAGAAATATGA
Upstream 100 bases:
>100_bases CTGCGACGAGGCCGTCTTTCACGGCGGCCTCATTTTTTCAGTCAGCCTCTGACTGGCGGGGAGTGGAGTACACGTTTCTT CTGACGAAGACCCATCACGG
Downstream 100 bases:
>100_bases AGCACGGAGGATAGAATGGGATTAAGAATCGGTACCAATGTGGCAGCGTTGAATGCACAAAAAAATCTGTACATGACTAA CATCAACGCAAACAGATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MTLSAIFQSCIFLSQRPNFQKVFPQQKIEKKRQKLDSSSCIIFPKSKQGTVSQVPNINFTGARIAPYANGWHTFTEEEI
Sequences:
>Translated_79_residues MTLSAIFQSCIFLSQRPNFQKVFPQQKIEKKRQKLDSSSCIIFPKSKQGTVSQVPNINFTGARIAPYANGWHTFTEEEI >Mature_78_residues TLSAIFQSCIFLSQRPNFQKVFPQQKIEKKRQKLDSSSCIIFPKSKQGTVSQVPNINFTGARIAPYANGWHTFTEEEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9036; Mature: 8905
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSAIFQSCIFLSQRPNFQKVFPQQKIEKKRQKLDSSSCIIFPKSKQGTVSQVPNINFT CCHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC GARIAPYANGWHTFTEEEI CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLSAIFQSCIFLSQRPNFQKVFPQQKIEKKRQKLDSSSCIIFPKSKQGTVSQVPNINFT CHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC GARIAPYANGWHTFTEEEI CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA