Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522023

Identifier: 42522023

GI number: 42522023

Start: 385826

End: 386065

Strand: Direct

Name: 42522023

Synonym: Bd0409

Alternate gene names: NA

Gene position: 385826-386065 (Clockwise)

Preceding gene: 42522022

Following gene: 42522024

Centisome position: 10.2

GC content: 40.0

Gene sequence:

>240_bases
GTGACTTTGTCCGCCATTTTTCAAAGCTGCATTTTTCTGTCGCAGCGACCGAATTTTCAAAAAGTTTTTCCTCAGCAAAA
AATAGAAAAGAAAAGACAAAAACTGGACTCGAGCAGTTGTATTATTTTTCCGAAAAGTAAGCAGGGAACTGTATCGCAAG
TTCCGAATATTAATTTTACAGGTGCACGGATCGCGCCTTATGCCAATGGATGGCACACTTTCACGGAGGAAGAAATATGA

Upstream 100 bases:

>100_bases
CTGCGACGAGGCCGTCTTTCACGGCGGCCTCATTTTTTCAGTCAGCCTCTGACTGGCGGGGAGTGGAGTACACGTTTCTT
CTGACGAAGACCCATCACGG

Downstream 100 bases:

>100_bases
AGCACGGAGGATAGAATGGGATTAAGAATCGGTACCAATGTGGCAGCGTTGAATGCACAAAAAAATCTGTACATGACTAA
CATCAACGCAAACAGATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MTLSAIFQSCIFLSQRPNFQKVFPQQKIEKKRQKLDSSSCIIFPKSKQGTVSQVPNINFTGARIAPYANGWHTFTEEEI

Sequences:

>Translated_79_residues
MTLSAIFQSCIFLSQRPNFQKVFPQQKIEKKRQKLDSSSCIIFPKSKQGTVSQVPNINFTGARIAPYANGWHTFTEEEI
>Mature_78_residues
TLSAIFQSCIFLSQRPNFQKVFPQQKIEKKRQKLDSSSCIIFPKSKQGTVSQVPNINFTGARIAPYANGWHTFTEEEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9036; Mature: 8905

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSAIFQSCIFLSQRPNFQKVFPQQKIEKKRQKLDSSSCIIFPKSKQGTVSQVPNINFT
CCHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC
GARIAPYANGWHTFTEEEI
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLSAIFQSCIFLSQRPNFQKVFPQQKIEKKRQKLDSSSCIIFPKSKQGTVSQVPNINFT
CHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC
GARIAPYANGWHTFTEEEI
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA