Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521979

Identifier: 42521979

GI number: 42521979

Start: 338751

End: 339635

Strand: Direct

Name: 42521979

Synonym: Bd0362

Alternate gene names: NA

Gene position: 338751-339635 (Clockwise)

Preceding gene: 42521978

Following gene: 42521982

Centisome position: 8.95

GC content: 51.86

Gene sequence:

>885_bases
ATGATGTCCAAACGGATGTACGCGGGAATCTGGGGATTGTTTCTGGCTCTGATGCTGAGCTCTTGTAAGACACCGGTGTC
TTTCGCCGAAGAATTCAGTTCCAAAACCTCTGAAGAAACCACCACAACAGACGATTCCACCAGCGATGGCAGTTCTGATG
ATTCCACCGACGATTCGGAAACGGTACCGGACTCTGAGGTCGTGGGTGAAGTCTGTGAACAACTGGATTCCGACTCTCAC
AACGCCTCTCAGGGCGATATCATGCAGGATCCATTCTTAAATATGTCTTTTGCTTCCGGCAAGGGGCTTGTTTTGCCCCA
GGGCCCTTGTGTAAAGCGCACGGTGAAAGAGGACTCGGATGTCCGCCGCGAGATTCTGTATGAATATTCCTGCCGTGAAG
TCAAAGGTACGGTGAATTTGATCAGCACGCGGGAAGAAGAAAACGGGGCGGTGGTTTCTGTTGTTGATACGGATGTCGAT
GTCTATGGGAAGACGGGTTCGATTCGAAACATTCAGTCCACTCACACGCACATGCGTCTTACCAGCGGAGCGATTCAGAT
TGATCGCGAGTTTGAGGAAACTTCGACCGTGGAAGGTGTTCAGCATCAGGTCACAGGGGTTTCTTTCTATGACTTTATTC
CGGATGAAGATTCTGCCAAAGGGGCGGGCTTTGTTCAGATCAGCGGAAACGTCAGTCACCTCAGGGGTGGCGTGACCCAG
AACGTGTACAGCGTGTCTTCCGATGGTTTGCATCGCGCGGTCTGCGGGTTTGATGACGGGGTGGTGACGATGAGATCCTC
GGAAAAGATCACCACCGTGACTTACTCTGGCTGTGGCAAGCCTGCGATCACTCAGGCCAATGCAGAAGTGGTTGAAGGAC
TTTAG

Upstream 100 bases:

>100_bases
GTTCGGGATTCTTTTCGTTTTTGAGGGGCTTGCATAGTCCCTCAATACTTTCCCCCTAACCTGATCCCATCAAACGCACT
TGTTCGTGCGGGGGGATCTT

Downstream 100 bases:

>100_bases
ACTCTGATGATTGCTTGTGATGAGCCCCAGAGTTCAGGCAAAAAAAAGCGGCGAACTTTAATTCGCCGCTTTGAGTTGCA
AAAAAGAACCAGGAACCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MMSKRMYAGIWGLFLALMLSSCKTPVSFAEEFSSKTSEETTTTDDSTSDGSSDDSTDDSETVPDSEVVGEVCEQLDSDSH
NASQGDIMQDPFLNMSFASGKGLVLPQGPCVKRTVKEDSDVRREILYEYSCREVKGTVNLISTREEENGAVVSVVDTDVD
VYGKTGSIRNIQSTHTHMRLTSGAIQIDREFEETSTVEGVQHQVTGVSFYDFIPDEDSAKGAGFVQISGNVSHLRGGVTQ
NVYSVSSDGLHRAVCGFDDGVVTMRSSEKITTVTYSGCGKPAITQANAEVVEGL

Sequences:

>Translated_294_residues
MMSKRMYAGIWGLFLALMLSSCKTPVSFAEEFSSKTSEETTTTDDSTSDGSSDDSTDDSETVPDSEVVGEVCEQLDSDSH
NASQGDIMQDPFLNMSFASGKGLVLPQGPCVKRTVKEDSDVRREILYEYSCREVKGTVNLISTREEENGAVVSVVDTDVD
VYGKTGSIRNIQSTHTHMRLTSGAIQIDREFEETSTVEGVQHQVTGVSFYDFIPDEDSAKGAGFVQISGNVSHLRGGVTQ
NVYSVSSDGLHRAVCGFDDGVVTMRSSEKITTVTYSGCGKPAITQANAEVVEGL
>Mature_294_residues
MMSKRMYAGIWGLFLALMLSSCKTPVSFAEEFSSKTSEETTTTDDSTSDGSSDDSTDDSETVPDSEVVGEVCEQLDSDSH
NASQGDIMQDPFLNMSFASGKGLVLPQGPCVKRTVKEDSDVRREILYEYSCREVKGTVNLISTREEENGAVVSVVDTDVD
VYGKTGSIRNIQSTHTHMRLTSGAIQIDREFEETSTVEGVQHQVTGVSFYDFIPDEDSAKGAGFVQISGNVSHLRGGVTQ
NVYSVSSDGLHRAVCGFDDGVVTMRSSEKITTVTYSGCGKPAITQANAEVVEGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31700; Mature: 31700

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSKRMYAGIWGLFLALMLSSCKTPVSFAEEFSSKTSEETTTTDDSTSDGSSDDSTDDSE
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
TVPDSEVVGEVCEQLDSDSHNASQGDIMQDPFLNMSFASGKGLVLPQGPCVKRTVKEDSD
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCHHHHHHCCHH
VRREILYEYSCREVKGTVNLISTREEENGAVVSVVDTDVDVYGKTGSIRNIQSTHTHMRL
HHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEECCEEEECCCCCCCCCHHHHHEEEE
TSGAIQIDREFEETSTVEGVQHQVTGVSFYDFIPDEDSAKGAGFVQISGNVSHLRGGVTQ
ECCEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCHHHHHCCCHH
NVYSVSSDGLHRAVCGFDDGVVTMRSSEKITTVTYSGCGKPAITQANAEVVEGL
CEEECCCCCCHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCEECCCHHHHCCC
>Mature Secondary Structure
MMSKRMYAGIWGLFLALMLSSCKTPVSFAEEFSSKTSEETTTTDDSTSDGSSDDSTDDSE
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
TVPDSEVVGEVCEQLDSDSHNASQGDIMQDPFLNMSFASGKGLVLPQGPCVKRTVKEDSD
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCHHHHHHCCHH
VRREILYEYSCREVKGTVNLISTREEENGAVVSVVDTDVDVYGKTGSIRNIQSTHTHMRL
HHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEECCEEEECCCCCCCCCHHHHHEEEE
TSGAIQIDREFEETSTVEGVQHQVTGVSFYDFIPDEDSAKGAGFVQISGNVSHLRGGVTQ
ECCEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCHHHHHCCCHH
NVYSVSSDGLHRAVCGFDDGVVTMRSSEKITTVTYSGCGKPAITQANAEVVEGL
CEEECCCCCCHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCEECCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA