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The map label for this gene is yciH [C]

Identifier: 42521857

GI number: 42521857

Start: 218881

End: 219243

Strand: Direct

Name: yciH [C]

Synonym: Bd0232

Alternate gene names: 42521857

Gene position: 218881-219243 (Clockwise)

Preceding gene: 42521856

Following gene: 42521858

Centisome position: 5.79

GC content: 47.11

Gene sequence:

>363_bases
GTGAAAAATACTCGCTTAGTTTTTAGTACTGATCCCCGTGACAACGTGACATGTCCCAACTGTAAGGAATTGAAGTCCGA
ATGCCGCTGTCGTCCTGAGGACACGGTGCAAGAAGGTCAGTTCACAGTAGTGTTCCGCCTGGAAAAAGGGGGGCGGGGTG
GAAAAACTGTCACGGTTCTTGATGGATTCCCTCGTAATGAAGAGTACTTAAAGACTTTGGCCAAAGAATTCAAAGCCAAA
TGCGGCGTCGGTGGAACCCATATCCTGGGCGACAAAGCCGGGATGATCGAAATCCAGGGTGACAAAAGAGACCAATTGAA
GAAGATTCTGGAAGCGAAGAAGATCAAATTTAAAGGCATGTAA

Upstream 100 bases:

>100_bases
AAACTCCGCAGCTTTTTAGATTCGATGGAAAAGAGTATACTCAGCACAAGTTGGGTGAAGAGCCCAGCCCTAATCCATCC
AATCAAGAGAGCTCAGGTTC

Downstream 100 bases:

>100_bases
AACTGGACCCTGTGCAACTTGCACTTTACATTTGTAGGGCTCATGCTTTTAAATATGAATATGTTTACGACTTCCACTCC
TTTAAGGGGAACGGACTTGG

Product: putative translation initiation factor SUI1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKNTRLVFSTDPRDNVTCPNCKELKSECRCRPEDTVQEGQFTVVFRLEKGGRGGKTVTVLDGFPRNEEYLKTLAKEFKAK
CGVGGTHILGDKAGMIEIQGDKRDQLKKILEAKKIKFKGM

Sequences:

>Translated_120_residues
MKNTRLVFSTDPRDNVTCPNCKELKSECRCRPEDTVQEGQFTVVFRLEKGGRGGKTVTVLDGFPRNEEYLKTLAKEFKAK
CGVGGTHILGDKAGMIEIQGDKRDQLKKILEAKKIKFKGM
>Mature_120_residues
MKNTRLVFSTDPRDNVTCPNCKELKSECRCRPEDTVQEGQFTVVFRLEKGGRGGKTVTVLDGFPRNEEYLKTLAKEFKAK
CGVGGTHILGDKAGMIEIQGDKRDQLKKILEAKKIKFKGM

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=116, Percent_Identity=39.6551724137931, Blast_Score=62, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 13481; Mature: 13481

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTRLVFSTDPRDNVTCPNCKELKSECRCRPEDTVQEGQFTVVFRLEKGGRGGKTVTVL
CCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE
DGFPRNEEYLKTLAKEFKAKCGVGGTHILGDKAGMIEIQGDKRDQLKKILEAKKIKFKGM
CCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHEEECCC
>Mature Secondary Structure
MKNTRLVFSTDPRDNVTCPNCKELKSECRCRPEDTVQEGQFTVVFRLEKGGRGGKTVTVL
CCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE
DGFPRNEEYLKTLAKEFKAKCGVGGTHILGDKAGMIEIQGDKRDQLKKILEAKKIKFKGM
CCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]