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The map label for this gene is sufB [C]

Identifier: 42521818

GI number: 42521818

Start: 171961

End: 173418

Strand: Direct

Name: sufB [C]

Synonym: Bd0186

Alternate gene names: 42521818

Gene position: 171961-173418 (Clockwise)

Preceding gene: 42521817

Following gene: 42521819

Centisome position: 4.55

GC content: 48.29

Gene sequence:

>1458_bases
ATGGATAATAACAAATCCTCCAGCAATCCGCTGGAAAGTTACGAATACAAATACGGTTTCACCACCGACATTGAAACAGA
TCAGGTTCAGCTGGGTCTGAACGAAGACATCATTCGTCTGATCTCTGCGAAAAAGAACGAGCCAGAGTGGATGCTTGAAT
ACCGCTTGAAGGCGTTCCGTCACTGGCTGACGATGGTGGAGCCTGAATGGGCGCACGTGTCTTATCCGAAGATCGACTTC
CAGGCGATCCGCTATTATTCCGCGCCGAAAAAAGCGACGGACGAAGCTGACAAACCAAAATCTCTGGATGATCTGGATCC
GGAGCTGATCAAGACATTTGAGAAGCTGGGTATTCCGCTGACCGAACAAAAGCGCATCTCCGGTATTGCCGTGGATGTGG
TGTTTGACTCTGTTTCTGTGGGCACGACTCACACCGAAGTGCTGGATAAAGCCGGTGTGATCTTCTGTTCTATTTCTGAG
GCGATTCACAAACATCCGGATCTGGTGAAAAAGTACCTGGGCTCTGTTGTACCTCACACGGACAACTATTATGCCGCTTT
GAATGCGGCGGTCTTCACTGACGGATCTTTCTGTTACATCCCGAAAGGCGTTCGTTGTCCGATTGATCTTTCCACTTACT
TCCGTATTAACGCCAAAGACACCGGTCAGTTTGAAAGAACTTTGCTGGTGTGTGATGAAGGCGGTTACGTGAATTACCTT
GAGGGCTGTACGGCGCCTCAACGTGATGAAAACCAGCTGCACGCCGCAGTGGTTGAGCTTGTGGCATTGGACAATGCCGA
GATCAAGTATTCCACAGTTCAAAACTGGTACACAGGCGATAAAGAAGGCCGTGGTGGTATCTATAACTTTGTGACCAAGC
GTGGAAAAGCTCTTGGGAAGTATTCCAAGATCTCCTGGACCCAAGTGGAATCCGGTTCTGCGATCACTTGGAAATATCCT
TCCTGCATTTTGCAGGGTGAAGGCTCTGAAGGGGCGTTCTACTCTGTGGCTTTGACTCACGATCTGATGCAGGCGGATAC
CGGCACGAAGATGATTCATATTGGTAAAAACACCAAGAGCACGATCATCTCCAAAGGTATTTCCACGGACAAGTCCTCCA
ATGCTTACCGTGGTCAGGTGAAGATTCTGCCTTCGGCGGAAAATGCGCGCAACTACTCCCAGTGTGACTCCATGCTGGTG
GGCGATCAAAGCAGTGCGCATACTTATCCTTATATTGAAGTGAAAAACAAAACTGCGACGATTGAACACGAAGCGACGAC
TTCACGTATCAGTGAAGATCAGATCTTCTATTTGCAGTCCCGCGGTCTGGATATGGAAAAAACAATTTCGATGCTGGTGA
ACGGCTTCTGTAAAGAGGTCTTTAAAGAGCTTCCTCTGGAATTCTCTGTCGAAGCCGTAAAACTGATCGAAATGAAACTT
GAGAATAGTGTCGGCTAG

Upstream 100 bases:

>100_bases
AACGACAGACTTACAGACTTCTACAAAAGCCTGAGCCTGAAAGAACTATTGGTGGAAAGAATGGCAATGCCAGCGAAAAA
ATCCTCAGAGGCGGTGGCCC

Downstream 100 bases:

>100_bases
GGCCGGCAGAGCGTAGCTGAAGCAGCTCAATAAAGGTGAAATATGAATTTACTAGAGATCAAAAACCTACATGCAAGAGT
TGAAGAAAAAGAAATCCTGA

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MDNNKSSSNPLESYEYKYGFTTDIETDQVQLGLNEDIIRLISAKKNEPEWMLEYRLKAFRHWLTMVEPEWAHVSYPKIDF
QAIRYYSAPKKATDEADKPKSLDDLDPELIKTFEKLGIPLTEQKRISGIAVDVVFDSVSVGTTHTEVLDKAGVIFCSISE
AIHKHPDLVKKYLGSVVPHTDNYYAALNAAVFTDGSFCYIPKGVRCPIDLSTYFRINAKDTGQFERTLLVCDEGGYVNYL
EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYTGDKEGRGGIYNFVTKRGKALGKYSKISWTQVESGSAITWKYP
SCILQGEGSEGAFYSVALTHDLMQADTGTKMIHIGKNTKSTIISKGISTDKSSNAYRGQVKILPSAENARNYSQCDSMLV
GDQSSAHTYPYIEVKNKTATIEHEATTSRISEDQIFYLQSRGLDMEKTISMLVNGFCKEVFKELPLEFSVEAVKLIEMKL
ENSVG

Sequences:

>Translated_485_residues
MDNNKSSSNPLESYEYKYGFTTDIETDQVQLGLNEDIIRLISAKKNEPEWMLEYRLKAFRHWLTMVEPEWAHVSYPKIDF
QAIRYYSAPKKATDEADKPKSLDDLDPELIKTFEKLGIPLTEQKRISGIAVDVVFDSVSVGTTHTEVLDKAGVIFCSISE
AIHKHPDLVKKYLGSVVPHTDNYYAALNAAVFTDGSFCYIPKGVRCPIDLSTYFRINAKDTGQFERTLLVCDEGGYVNYL
EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYTGDKEGRGGIYNFVTKRGKALGKYSKISWTQVESGSAITWKYP
SCILQGEGSEGAFYSVALTHDLMQADTGTKMIHIGKNTKSTIISKGISTDKSSNAYRGQVKILPSAENARNYSQCDSMLV
GDQSSAHTYPYIEVKNKTATIEHEATTSRISEDQIFYLQSRGLDMEKTISMLVNGFCKEVFKELPLEFSVEAVKLIEMKL
ENSVG
>Mature_485_residues
MDNNKSSSNPLESYEYKYGFTTDIETDQVQLGLNEDIIRLISAKKNEPEWMLEYRLKAFRHWLTMVEPEWAHVSYPKIDF
QAIRYYSAPKKATDEADKPKSLDDLDPELIKTFEKLGIPLTEQKRISGIAVDVVFDSVSVGTTHTEVLDKAGVIFCSISE
AIHKHPDLVKKYLGSVVPHTDNYYAALNAAVFTDGSFCYIPKGVRCPIDLSTYFRINAKDTGQFERTLLVCDEGGYVNYL
EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYTGDKEGRGGIYNFVTKRGKALGKYSKISWTQVESGSAITWKYP
SCILQGEGSEGAFYSVALTHDLMQADTGTKMIHIGKNTKSTIISKGISTDKSSNAYRGQVKILPSAENARNYSQCDSMLV
GDQSSAHTYPYIEVKNKTATIEHEATTSRISEDQIFYLQSRGLDMEKTISMLVNGFCKEVFKELPLEFSVEAVKLIEMKL
ENSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=61.3778705636743, Blast_Score=616, Evalue=1e-177,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=27.4509803921569, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 54367; Mature: 54367

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNKSSSNPLESYEYKYGFTTDIETDQVQLGLNEDIIRLISAKKNEPEWMLEYRLKAFR
CCCCCCCCCCCHHCEEECCCCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHH
HWLTMVEPEWAHVSYPKIDFQAIRYYSAPKKATDEADKPKSLDDLDPELIKTFEKLGIPL
HHHHHCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
TEQKRISGIAVDVVFDSVSVGTTHTEVLDKAGVIFCSISEAIHKHPDLVKKYLGSVVPHT
CCCHHCCCEEEEEEEECEECCCCHHHHHHCCCEEEEEEHHHHHCCHHHHHHHHHHCCCCC
DNYYAALNAAVFTDGSFCYIPKGVRCPIDLSTYFRINAKDTGQFERTLLVCDEGGYVNYL
CCEEEEEEEEEEECCCEEECCCCCCCCEECCEEEEEECCCCCCEEEEEEEECCCCCEEHH
EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYTGDKEGRGGIYNFVTKRGKALGK
HCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHCC
YSKISWTQVESGSAITWKYPSCILQGEGSEGAFYSVALTHDLMQADTGTKMIHIGKNTKS
CCCCEEEEECCCCEEEEECCCEEEECCCCCCCEEEEEEHHHHHHCCCCCEEEEECCCCHH
TIISKGISTDKSSNAYRGQVKILPSAENARNYSQCDSMLVGDQSSAHTYPYIEVKNKTAT
HHHHCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHEEECCCCCCCCCCEEEECCCEEE
IEHEATTSRISEDQIFYLQSRGLDMEKTISMLVNGFCKEVFKELPLEFSVEAVKLIEMKL
EEECHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ENSVG
HCCCC
>Mature Secondary Structure
MDNNKSSSNPLESYEYKYGFTTDIETDQVQLGLNEDIIRLISAKKNEPEWMLEYRLKAFR
CCCCCCCCCCCHHCEEECCCCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHH
HWLTMVEPEWAHVSYPKIDFQAIRYYSAPKKATDEADKPKSLDDLDPELIKTFEKLGIPL
HHHHHCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
TEQKRISGIAVDVVFDSVSVGTTHTEVLDKAGVIFCSISEAIHKHPDLVKKYLGSVVPHT
CCCHHCCCEEEEEEEECEECCCCHHHHHHCCCEEEEEEHHHHHCCHHHHHHHHHHCCCCC
DNYYAALNAAVFTDGSFCYIPKGVRCPIDLSTYFRINAKDTGQFERTLLVCDEGGYVNYL
CCEEEEEEEEEEECCCEEECCCCCCCCEECCEEEEEECCCCCCEEEEEEEECCCCCEEHH
EGCTAPQRDENQLHAAVVELVALDNAEIKYSTVQNWYTGDKEGRGGIYNFVTKRGKALGK
HCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHCC
YSKISWTQVESGSAITWKYPSCILQGEGSEGAFYSVALTHDLMQADTGTKMIHIGKNTKS
CCCCEEEEECCCCEEEEECCCEEEECCCCCCCEEEEEEHHHHHHCCCCCEEEEECCCCHH
TIISKGISTDKSSNAYRGQVKILPSAENARNYSQCDSMLVGDQSSAHTYPYIEVKNKTAT
HHHHCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHEEECCCCCCCCCCEEEECCCEEE
IEHEATTSRISEDQIFYLQSRGLDMEKTISMLVNGFCKEVFKELPLEFSVEAVKLIEMKL
EEECHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ENSVG
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]