| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521681
Identifier: 42521681
GI number: 42521681
Start: 29825
End: 30715
Strand: Direct
Name: 42521681
Synonym: Bd0033
Alternate gene names: NA
Gene position: 29825-30715 (Clockwise)
Preceding gene: 42521680
Following gene: 42521682
Centisome position: 0.79
GC content: 48.93
Gene sequence:
>891_bases ATGAAGAAGACGGCGACCCCACAGAAGTTCATCACAATTTCATCACTCTCGATTTTGTTGTCGATGCTCACTGTGGTCAT GGGCGCCCCTCTTCTTCGTGTATTACGCAAGACTTACGGCCCCGTCGCCTTTTGGATTTTGGGGATCGTGGTCACAGGAG CAGCGTGGCTCCTGAACGCTCAACCTCTCGCTCTGTTTCTAGGCTCTGTTTGGATGACTTTAGGCGCCTATATGGAAATG GAACAACGAGGACTTGGGTGGTGGATTTCGGGACTGCTGAGTGTCTCTGTGGGATCTGTGGCCGCTGGCCTGGGTATCCT GGGGGCTTTCAAAAGAAACGGCATCAACACGTATGCTGAAGTTCAGGGACTGGTGGAAAAGTTCGCACAGAAAGTTCAGG AAATGAATCCCGCTGTGAAAATGGATCCGGGTGTTCTGATGCAGCAGGTTCCCTCAGCCGTGGTTATCATTTTGGTTTTA GCCCTGGGTTTGGGACTTATTTTTGAGAGAAGGGTTTTTTCGTGGCTCAATTTGCCCCGCGAGAAAATTGCCTCTCAGCT CAAGTTGTTGGAATATCGTTTGCCCGATTATTTTATTTGGGTGGCGATGACAGCCTTCCTTCTGACAATGGTGAGTTTTG GCGGTAAGGCCATTGCTATCCTCGCAGTTAATATACTGAACGTCGCAATCGTTCTTTATTTCTTTCAGGGGCTGGCGGTG TTGGAGGTATTTCTGAATTCGATGAGAGCAGGATTGTTCATTCGGGTTCTGACGTACATAATCTTGGTCGGTCAGTTATT GCCGATTCTGGCAGTGGTTGGCTTGATCGATTACTGGGTTGATTTCAGAGCGCGTCTTCGCAAGATGAAGACACCGTCTG AAAACAGCTAA
Upstream 100 bases:
>100_bases GAAGCAAAAGCTGCTGCCCGTAAAGCTGCATTTGCTGCTGCTAAAGCAGAGCGTTCTGAGCGTTACGACAAAGGCGAATA ATTTAGAAAAGGCGTAAGCC
Downstream 100 bases:
>100_bases AAACTATGGAGATCACATGAAAGTTATTCTTCAAAAAGACGTTAAAGATGTAGGTCGTGTTGGTGAGTTGGTGAACGTTT CTGAAGGTTTCGCGAGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MKKTATPQKFITISSLSILLSMLTVVMGAPLLRVLRKTYGPVAFWILGIVVTGAAWLLNAQPLALFLGSVWMTLGAYMEM EQRGLGWWISGLLSVSVGSVAAGLGILGAFKRNGINTYAEVQGLVEKFAQKVQEMNPAVKMDPGVLMQQVPSAVVIILVL ALGLGLIFERRVFSWLNLPREKIASQLKLLEYRLPDYFIWVAMTAFLLTMVSFGGKAIAILAVNILNVAIVLYFFQGLAV LEVFLNSMRAGLFIRVLTYIILVGQLLPILAVVGLIDYWVDFRARLRKMKTPSENS
Sequences:
>Translated_296_residues MKKTATPQKFITISSLSILLSMLTVVMGAPLLRVLRKTYGPVAFWILGIVVTGAAWLLNAQPLALFLGSVWMTLGAYMEM EQRGLGWWISGLLSVSVGSVAAGLGILGAFKRNGINTYAEVQGLVEKFAQKVQEMNPAVKMDPGVLMQQVPSAVVIILVL ALGLGLIFERRVFSWLNLPREKIASQLKLLEYRLPDYFIWVAMTAFLLTMVSFGGKAIAILAVNILNVAIVLYFFQGLAV LEVFLNSMRAGLFIRVLTYIILVGQLLPILAVVGLIDYWVDFRARLRKMKTPSENS >Mature_296_residues MKKTATPQKFITISSLSILLSMLTVVMGAPLLRVLRKTYGPVAFWILGIVVTGAAWLLNAQPLALFLGSVWMTLGAYMEM EQRGLGWWISGLLSVSVGSVAAGLGILGAFKRNGINTYAEVQGLVEKFAQKVQEMNPAVKMDPGVLMQQVPSAVVIILVL ALGLGLIFERRVFSWLNLPREKIASQLKLLEYRLPDYFIWVAMTAFLLTMVSFGGKAIAILAVNILNVAIVLYFFQGLAV LEVFLNSMRAGLFIRVLTYIILVGQLLPILAVVGLIDYWVDFRARLRKMKTPSENS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32668; Mature: 32668
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTATPQKFITISSLSILLSMLTVVMGAPLLRVLRKTYGPVAFWILGIVVTGAAWLLNA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC QPLALFLGSVWMTLGAYMEMEQRGLGWWISGLLSVSVGSVAAGLGILGAFKRNGINTYAE CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VQGLVEKFAQKVQEMNPAVKMDPGVLMQQVPSAVVIILVLALGLGLIFERRVFSWLNLPR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EKIASQLKLLEYRLPDYFIWVAMTAFLLTMVSFGGKAIAILAVNILNVAIVLYFFQGLAV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LEVFLNSMRAGLFIRVLTYIILVGQLLPILAVVGLIDYWVDFRARLRKMKTPSENS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKTATPQKFITISSLSILLSMLTVVMGAPLLRVLRKTYGPVAFWILGIVVTGAAWLLNA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC QPLALFLGSVWMTLGAYMEMEQRGLGWWISGLLSVSVGSVAAGLGILGAFKRNGINTYAE CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VQGLVEKFAQKVQEMNPAVKMDPGVLMQQVPSAVVIILVLALGLGLIFERRVFSWLNLPR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EKIASQLKLLEYRLPDYFIWVAMTAFLLTMVSFGGKAIAILAVNILNVAIVLYFFQGLAV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LEVFLNSMRAGLFIRVLTYIILVGQLLPILAVVGLIDYWVDFRARLRKMKTPSENS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA