| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410429
Identifier: 41410429
GI number: 41410429
Start: 4807219
End: 4807728
Strand: Reverse
Name: 41410429
Synonym: MAP4331c
Alternate gene names: NA
Gene position: 4807728-4807219 (Counterclockwise)
Preceding gene: 41410430
Following gene: 41410428
Centisome position: 99.54
GC content: 70.39
Gene sequence:
>510_bases GTGGACTATTGCTTGGCAGGCGACGGCGGCGCGGCCGCGATCTGGCACGGTCAACCCGACCTCGACCTTGACGGCGACGG CCGCTTCGAATCGATCGGGCTGGACTTCGACCACGACGGGCTGCGCGACGATGCACTGGCGGATCTGGACGGGGACGGCC TCGTCGATCACGCCGTGCTGGACCTCGACAACGACGGCACGCCCGAGGCCTATTTCACCGACGACGGTTCGGGAACGTGG GCGGTGGCCGTGGACCGCAACGGGCAGCTGCGCTGGTTCGGCCTCGACGGCGTCGAGCACACCGGCGGGCCCATGGTCGA CTTCGACGGCCACGGCCGCCCCGACGCCCGGCTCGTCGATACCGACGGCAACGGGCTGGCCGACCGGGTGCTGCGCACCG ACGAGACCGGTGTGACCGGATACGTCGACACCGACGGTGACGGCAAGTGGAACGTCCGGCTGACCGACACCGACGGTGAC GGTCTCGCCGACGGCGCCAGCGCACTGTGA
Upstream 100 bases:
>100_bases GGAGCGGGGACCGTTGGATCCCGACGAGGCGACCGCAGAACTGCTGTCCTGGTGGCGATCTCGCGGGAACGGGTAGCCGC GGCCGCGCGTCCGACAATTT
Downstream 100 bases:
>100_bases GTACGGGGTGGTGATCTGACGCGGCGTCGCGCCGGGGATACGGCCGATGCAGCTGCGCCACTTGAGCATTCCGTTTCTGG TCGCCGAGGCCGGCGGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MDYCLAGDGGAAAIWHGQPDLDLDGDGRFESIGLDFDHDGLRDDALADLDGDGLVDHAVLDLDNDGTPEAYFTDDGSGTW AVAVDRNGQLRWFGLDGVEHTGGPMVDFDGHGRPDARLVDTDGNGLADRVLRTDETGVTGYVDTDGDGKWNVRLTDTDGD GLADGASAL
Sequences:
>Translated_169_residues MDYCLAGDGGAAAIWHGQPDLDLDGDGRFESIGLDFDHDGLRDDALADLDGDGLVDHAVLDLDNDGTPEAYFTDDGSGTW AVAVDRNGQLRWFGLDGVEHTGGPMVDFDGHGRPDARLVDTDGNGLADRVLRTDETGVTGYVDTDGDGKWNVRLTDTDGD GLADGASAL >Mature_169_residues MDYCLAGDGGAAAIWHGQPDLDLDGDGRFESIGLDFDHDGLRDDALADLDGDGLVDHAVLDLDNDGTPEAYFTDDGSGTW AVAVDRNGQLRWFGLDGVEHTGGPMVDFDGHGRPDARLVDTDGNGLADRVLRTDETGVTGYVDTDGDGKWNVRLTDTDGD GLADGASAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17782; Mature: 17782
Theoretical pI: Translated: 3.72; Mature: 3.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYCLAGDGGAAAIWHGQPDLDLDGDGRFESIGLDFDHDGLRDDALADLDGDGLVDHAVL CCEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCEEEEEE DLDNDGTPEAYFTDDGSGTWAVAVDRNGQLRWFGLDGVEHTGGPMVDFDGHGRPDARLVD ECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCCCEEEE TDGNGLADRVLRTDETGVTGYVDTDGDGKWNVRLTDTDGDGLADGASAL CCCCCHHHHEEECCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MDYCLAGDGGAAAIWHGQPDLDLDGDGRFESIGLDFDHDGLRDDALADLDGDGLVDHAVL CCEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCEEEEEE DLDNDGTPEAYFTDDGSGTWAVAVDRNGQLRWFGLDGVEHTGGPMVDFDGHGRPDARLVD ECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCCCEEEE TDGNGLADRVLRTDETGVTGYVDTDGDGKWNVRLTDTDGDGLADGASAL CCCCCHHHHEEECCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA