| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is atsA
Identifier: 41410269
GI number: 41410269
Start: 4643469
End: 4645838
Strand: Direct
Name: atsA
Synonym: MAP4171
Alternate gene names: 41410269
Gene position: 4643469-4645838 (Clockwise)
Preceding gene: 41410268
Following gene: 41410271
Centisome position: 96.14
GC content: 66.58
Gene sequence:
>2370_bases ATGGTGGCTGGTTCGGGGCAATCCGCGGAATTTTCCGGCCGGGTCGAGCTCGACATCCGGGATTCCGAACCGGACTGGGG TCCCTACGCCGCGCCGACCGCCCCGCCGAACGCGCCCAACATCCTGTATCTGGTCTGGGACGACACCGGGATCGCGACGT GGGACTGCTTCGGCGGTCTGGTGGAGATGCCGGCCATGTCGCGCATCGCCGAACGCGGCGTCCGGCTCTCGCAGTTCCAC ACCACCGCGCTGTGCTCGCCGACCCGGGCGGCGTTGCTCACCGGTCGCAACGCCACGACCGTCGGGATGGCCACCATCGA GGAGTTCACCGAGGGCTTCCCCAACGCCAACGGCCGCATCCCGTTCGACACCGCGCTGCTGTCCGAGGCGCTCGCCGAAC ACGGTTACAACACTTACTGTGTCGGCAAGTGGCACCTGACGCCGCTGGAAGAATCCAACATGGCCTCGACCAAGCGGCAC TGGCCGACCTCGCGCGGCTTCGAGCGGTTCTACGGCTTCCTGGGCGGCGAGACCGATCAGTGGTACCCCGACCTGGTCTA CGACAACCATCCGGTGAGCCCGCCGGCCACCCCGGAGGACGGCTACCACCTCTCCAAGGACCTCGCCGACAAGACGATCG AGTTCATCCGCGACGCCAAAGTGATTGCGCCGGAAAAGCCTTGGTTCTCCTATGTGTGTCCGGGCGCCGGGCACGCGCCG CATCACGTGTTCAAGGAATGGGCCGACCGTTACGCCGGCCGCTTCGACATGGGTTATGAGCGCTACCGCGAGGTGGTGCT GGAGCGGCAGAAGGCGATGGGGATCGTGCCGTCCGACACCGAATTGTCCCCGGTGAACCCGTATCTGGACGTGACGGGGC CGCGCGGCGAGCCCTGGCCGTTGCAGGACACGGTGCGGCCGTGGGACTCGCTGAACGACGAGGAGAAGAAGCTGTTCGCC CGGATGGCCGAGGTGTTCGCCGGCTTCCTGAGCTACACCGACGCCCAGATCGGCCGGATCCTGGACTATCTCGAGGAATC GGGCCAGTTGGACGACACCATCATCGTGGTGATCTCCGACAACGGCGCCAGCGGTGAGGGTGGCCCGAACGGATCGGTCA ACGAGGGCAAGTTCTTCAACGGCTACATCGACACCGTCGAGGAAAGCATGAAGCTGTTCGATCAGCTCGGCGGGCCGCAG ACCTACAACCATTACCCGATCGGCTGGGCGATGGCGTTCAACACCCCCTACAAGCTGTACAAGCGGTACGCCTCGCATGA GGGCGGCATCGCCGACACGGCGATCATCTCCTGGCCCAACGGAATCGCCGCGCACGGCGAGATCCGCGACAACTATGTCA ACGTCTGCGACATCACCCCGACCGTGTACGACCTGCTGGGCATGTCCCCGCCGGAAACCGTCAAGGGGATCGCCCAGAAG CCGCTGGACGGCGTGAGTTTCAAAGCGGCCCTTGACGATCCGAACGCCGACACCGGAAAGACCACCCAGTTCTACACCAT GCTGGGCACCCGCGGCATCTGGCATGAGGGCTGGTTCGCCAACACCGTGCACGCGGCCACCCCGGCCGGCTGGTCGCACT TCGACGCCGACCGCTGGGAGCTGTTCCACATCGAGGCCGACCGCAGCCAATGCCACGACCTAGCCGCTGAAAACCCGGAC AAACTCGAAGAACTCAAGGCGTTGTGGTTCGCGGAGGCGGCCAGGTACAACGGGCTGCCGCTGTCGGACCTGAACATCCT GGAGACCATGACCCGGTCCCGGCCGTACCTGGTCGGCGAACGGGACAGCTATGTCTACTACCCCGACTGCGCCGACGTCG GCATCGGCGCCGCCGCCGAGATCCGCGGCCGATCGTTCTCGGTGCTGGCCGAGGCAACCGTCGACACCACCGGCGCCGAG GGGGTGCTGTTCAAGCAGGGCGGGGCGCACGGCGGGCACGTGCTGTTCATCCAGGACGGGCGGCTGCACTACGTCTACAA CTTCCTCGGCGAACGCCAGCAGGAGGTCTCCTCGTCGGTGCCCGTGCCGCTGGGCAGGCATCTGTTCGGCGCCAGCTATG CACGGACGGGGACGGTCCCCGACAGCCACACCCCGCTCGGTGACCTGACGCTGTTCATCGACGACGAGGTCGTCGGCACC CTGGCCGGGGTGAGCACCCACCCGGGGACTTTCGGGCTGGCGGGTGCCGGAATCACCGTGGGCCGCAACGGCGGATCGGG GGTGTCCAGCCGGTTCAAGGCGCCGTTCGTGTTCACCGGCGGCACCATCGCCCGGGTCACCCTCGACCTGTCCGGCCGGC CCTATCGCGACGTGGAAACCGAGATCGCCCTTGCCTTTTCGCGGGACTGA
Upstream 100 bases:
>100_bases GGCGAAGTAACCCCTCCCCGCAAGAGGCACCGAAACGCCCGGCCCCGGGTGTAGTCTGCACGCGACGCGCGGCGAGTCCG CGACGAGAGTGAGGCTGACG
Downstream 100 bases:
>100_bases AGCCGCGACGGTCAGTCCGGGTTGGGCGCCTGCGGTGAGCTGATCGCGTCGACGGCGCCGGACACCTTGGCTTGAAAGTC CGCCGACAGCGGGATGTAGC
Product: AtsA
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 789; Mature: 789
Protein sequence:
>789_residues MVAGSGQSAEFSGRVELDIRDSEPDWGPYAAPTAPPNAPNILYLVWDDTGIATWDCFGGLVEMPAMSRIAERGVRLSQFH TTALCSPTRAALLTGRNATTVGMATIEEFTEGFPNANGRIPFDTALLSEALAEHGYNTYCVGKWHLTPLEESNMASTKRH WPTSRGFERFYGFLGGETDQWYPDLVYDNHPVSPPATPEDGYHLSKDLADKTIEFIRDAKVIAPEKPWFSYVCPGAGHAP HHVFKEWADRYAGRFDMGYERYREVVLERQKAMGIVPSDTELSPVNPYLDVTGPRGEPWPLQDTVRPWDSLNDEEKKLFA RMAEVFAGFLSYTDAQIGRILDYLEESGQLDDTIIVVISDNGASGEGGPNGSVNEGKFFNGYIDTVEESMKLFDQLGGPQ TYNHYPIGWAMAFNTPYKLYKRYASHEGGIADTAIISWPNGIAAHGEIRDNYVNVCDITPTVYDLLGMSPPETVKGIAQK PLDGVSFKAALDDPNADTGKTTQFYTMLGTRGIWHEGWFANTVHAATPAGWSHFDADRWELFHIEADRSQCHDLAAENPD KLEELKALWFAEAARYNGLPLSDLNILETMTRSRPYLVGERDSYVYYPDCADVGIGAAAEIRGRSFSVLAEATVDTTGAE GVLFKQGGAHGGHVLFIQDGRLHYVYNFLGERQQEVSSSVPVPLGRHLFGASYARTGTVPDSHTPLGDLTLFIDDEVVGT LAGVSTHPGTFGLAGAGITVGRNGGSGVSSRFKAPFVFTGGTIARVTLDLSGRPYRDVETEIALAFSRD
Sequences:
>Translated_789_residues MVAGSGQSAEFSGRVELDIRDSEPDWGPYAAPTAPPNAPNILYLVWDDTGIATWDCFGGLVEMPAMSRIAERGVRLSQFH TTALCSPTRAALLTGRNATTVGMATIEEFTEGFPNANGRIPFDTALLSEALAEHGYNTYCVGKWHLTPLEESNMASTKRH WPTSRGFERFYGFLGGETDQWYPDLVYDNHPVSPPATPEDGYHLSKDLADKTIEFIRDAKVIAPEKPWFSYVCPGAGHAP HHVFKEWADRYAGRFDMGYERYREVVLERQKAMGIVPSDTELSPVNPYLDVTGPRGEPWPLQDTVRPWDSLNDEEKKLFA RMAEVFAGFLSYTDAQIGRILDYLEESGQLDDTIIVVISDNGASGEGGPNGSVNEGKFFNGYIDTVEESMKLFDQLGGPQ TYNHYPIGWAMAFNTPYKLYKRYASHEGGIADTAIISWPNGIAAHGEIRDNYVNVCDITPTVYDLLGMSPPETVKGIAQK PLDGVSFKAALDDPNADTGKTTQFYTMLGTRGIWHEGWFANTVHAATPAGWSHFDADRWELFHIEADRSQCHDLAAENPD KLEELKALWFAEAARYNGLPLSDLNILETMTRSRPYLVGERDSYVYYPDCADVGIGAAAEIRGRSFSVLAEATVDTTGAE GVLFKQGGAHGGHVLFIQDGRLHYVYNFLGERQQEVSSSVPVPLGRHLFGASYARTGTVPDSHTPLGDLTLFIDDEVVGT LAGVSTHPGTFGLAGAGITVGRNGGSGVSSRFKAPFVFTGGTIARVTLDLSGRPYRDVETEIALAFSRD >Mature_789_residues MVAGSGQSAEFSGRVELDIRDSEPDWGPYAAPTAPPNAPNILYLVWDDTGIATWDCFGGLVEMPAMSRIAERGVRLSQFH TTALCSPTRAALLTGRNATTVGMATIEEFTEGFPNANGRIPFDTALLSEALAEHGYNTYCVGKWHLTPLEESNMASTKRH WPTSRGFERFYGFLGGETDQWYPDLVYDNHPVSPPATPEDGYHLSKDLADKTIEFIRDAKVIAPEKPWFSYVCPGAGHAP HHVFKEWADRYAGRFDMGYERYREVVLERQKAMGIVPSDTELSPVNPYLDVTGPRGEPWPLQDTVRPWDSLNDEEKKLFA RMAEVFAGFLSYTDAQIGRILDYLEESGQLDDTIIVVISDNGASGEGGPNGSVNEGKFFNGYIDTVEESMKLFDQLGGPQ TYNHYPIGWAMAFNTPYKLYKRYASHEGGIADTAIISWPNGIAAHGEIRDNYVNVCDITPTVYDLLGMSPPETVKGIAQK PLDGVSFKAALDDPNADTGKTTQFYTMLGTRGIWHEGWFANTVHAATPAGWSHFDADRWELFHIEADRSQCHDLAAENPD KLEELKALWFAEAARYNGLPLSDLNILETMTRSRPYLVGERDSYVYYPDCADVGIGAAAEIRGRSFSVLAEATVDTTGAE GVLFKQGGAHGGHVLFIQDGRLHYVYNFLGERQQEVSSSVPVPLGRHLFGASYARTGTVPDSHTPLGDLTLFIDDEVVGT LAGVSTHPGTFGLAGAGITVGRNGGSGVSSRFKAPFVFTGGTIARVTLDLSGRPYRDVETEIALAFSRD
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI59797060, Length=244, Percent_Identity=28.2786885245902, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI38569407, Length=247, Percent_Identity=29.5546558704453, Blast_Score=93, Evalue=1e-18, Organism=Homo sapiens, GI157266309, Length=161, Percent_Identity=38.5093167701863, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI38569405, Length=247, Percent_Identity=29.5546558704453, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI109389362, Length=252, Percent_Identity=26.5873015873016, Blast_Score=90, Evalue=1e-17, Organism=Homo sapiens, GI71852584, Length=146, Percent_Identity=37.6712328767123, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI58743319, Length=344, Percent_Identity=27.0348837209302, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI71852586, Length=146, Percent_Identity=37.6712328767123, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI31742482, Length=152, Percent_Identity=33.5526315789474, Blast_Score=81, Evalue=5e-15, Organism=Homo sapiens, GI53831991, Length=137, Percent_Identity=35.036496350365, Blast_Score=80, Evalue=1e-14, Organism=Homo sapiens, GI146229331, Length=193, Percent_Identity=32.1243523316062, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI146229329, Length=193, Percent_Identity=32.1243523316062, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI6005990, Length=193, Percent_Identity=32.1243523316062, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI146229324, Length=193, Percent_Identity=32.1243523316062, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI4503899, Length=255, Percent_Identity=29.4117647058824, Blast_Score=71, Evalue=4e-12, Organism=Escherichia coli, GI87081924, Length=211, Percent_Identity=26.5402843601896, Blast_Score=71, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115533416, Length=339, Percent_Identity=25.9587020648968, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17559078, Length=135, Percent_Identity=35.5555555555556, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI281363223, Length=355, Percent_Identity=24.2253521126761, Blast_Score=88, Evalue=3e-17, Organism=Drosophila melanogaster, GI24666109, Length=434, Percent_Identity=23.2718894009217, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI24666175, Length=454, Percent_Identity=22.9074889867841, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI281366397, Length=261, Percent_Identity=26.8199233716475, Blast_Score=76, Evalue=7e-14, Organism=Drosophila melanogaster, GI281366395, Length=261, Percent_Identity=26.8199233716475, Blast_Score=76, Evalue=7e-14, Organism=Drosophila melanogaster, GI24666163, Length=261, Percent_Identity=26.8199233716475, Blast_Score=76, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 86561; Mature: 86561
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00523 SULFATASE_1 ; PS00149 SULFATASE_2 ; PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAGSGQSAEFSGRVELDIRDSEPDWGPYAAPTAPPNAPNILYLVWDDTGIATWDCFGGL CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEHHHHHHH VEMPAMSRIAERGVRLSQFHTTALCSPTRAALLTGRNATTVGMATIEEFTEGFPNANGRI HHHHHHHHHHHCCCEEHHHHHHHHCCCCHHHEEECCCCCEEHHHHHHHHHHCCCCCCCCC PFDTALLSEALAEHGYNTYCVGKWHLTPLEESNMASTKRHWPTSRGFERFYGFLGGETDQ CHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCC WYPDLVYDNHPVSPPATPEDGYHLSKDLADKTIEFIRDAKVIAPEKPWFSYVCPGAGHAP CCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCH HHVFKEWADRYAGRFDMGYERYREVVLERQKAMGIVPSDTELSPVNPYLDVTGPRGEPWP HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCC LQDTVRPWDSLNDEEKKLFARMAEVFAGFLSYTDAQIGRILDYLEESGQLDDTIIVVISD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC NGASGEGGPNGSVNEGKFFNGYIDTVEESMKLFDQLGGPQTYNHYPIGWAMAFNTPYKLY CCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHH KRYASHEGGIADTAIISWPNGIAAHGEIRDNYVNVCDITPTVYDLLGMSPPETVKGIAQK HHHHCCCCCCCCEEEEECCCCCEECCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHC PLDGVSFKAALDDPNADTGKTTQFYTMLGTRGIWHEGWFANTVHAATPAGWSHFDADRWE CCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LFHIEADRSQCHDLAAENPDKLEELKALWFAEAARYNGLPLSDLNILETMTRSRPYLVGE EEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEC RDSYVYYPDCADVGIGAAAEIRGRSFSVLAEATVDTTGAEGVLFKQGGAHGGHVLFIQDG CCCEEECCCHHCCCCCCCCEECCCEEEEEEEEEECCCCCCEEEEECCCCCCCEEEEEECC RLHYVYNFLGERQQEVSSSVPVPLGRHLFGASYARTGTVPDSHTPLGDLTLFIDDEVVGT CEEEHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH LAGVSTHPGTFGLAGAGITVGRNGGSGVSSRFKAPFVFTGGTIARVTLDLSGRPYRDVET HHCCCCCCCCCEECCCCEEEECCCCCCCHHHCCCCEEEECCEEEEEEEECCCCCCCCCCC EIALAFSRD EEEEEEECC >Mature Secondary Structure MVAGSGQSAEFSGRVELDIRDSEPDWGPYAAPTAPPNAPNILYLVWDDTGIATWDCFGGL CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEHHHHHHH VEMPAMSRIAERGVRLSQFHTTALCSPTRAALLTGRNATTVGMATIEEFTEGFPNANGRI HHHHHHHHHHHCCCEEHHHHHHHHCCCCHHHEEECCCCCEEHHHHHHHHHHCCCCCCCCC PFDTALLSEALAEHGYNTYCVGKWHLTPLEESNMASTKRHWPTSRGFERFYGFLGGETDQ CHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCC WYPDLVYDNHPVSPPATPEDGYHLSKDLADKTIEFIRDAKVIAPEKPWFSYVCPGAGHAP CCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCH HHVFKEWADRYAGRFDMGYERYREVVLERQKAMGIVPSDTELSPVNPYLDVTGPRGEPWP HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCC LQDTVRPWDSLNDEEKKLFARMAEVFAGFLSYTDAQIGRILDYLEESGQLDDTIIVVISD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC NGASGEGGPNGSVNEGKFFNGYIDTVEESMKLFDQLGGPQTYNHYPIGWAMAFNTPYKLY CCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHH KRYASHEGGIADTAIISWPNGIAAHGEIRDNYVNVCDITPTVYDLLGMSPPETVKGIAQK HHHHCCCCCCCCEEEEECCCCCEECCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHC PLDGVSFKAALDDPNADTGKTTQFYTMLGTRGIWHEGWFANTVHAATPAGWSHFDADRWE CCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LFHIEADRSQCHDLAAENPDKLEELKALWFAEAARYNGLPLSDLNILETMTRSRPYLVGE EEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEC RDSYVYYPDCADVGIGAAAEIRGRSFSVLAEATVDTTGAEGVLFKQGGAHGGHVLFIQDG CCCEEECCCHHCCCCCCCCEECCCEEEEEEEEEECCCCCCEEEEECCCCCCCEEEEEECC RLHYVYNFLGERQQEVSSSVPVPLGRHLFGASYARTGTVPDSHTPLGDLTLFIDDEVVGT CEEEHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH LAGVSTHPGTFGLAGAGITVGRNGGSGVSSRFKAPFVFTGGTIARVTLDLSGRPYRDVET HHCCCCCCCCCEECCCCEEEECCCCCCCHHHCCCCEEEECCEEEEEEEECCCCCCCCCCC EIALAFSRD EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7744061; 10984043 [H]