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The map label for this gene is ybfF [C]

Identifier: 41410133

GI number: 41410133

Start: 4496748

End: 4497410

Strand: Direct

Name: ybfF [C]

Synonym: MAP4035

Alternate gene names: 41410133

Gene position: 4496748-4497410 (Clockwise)

Preceding gene: 41410132

Following gene: 41410134

Centisome position: 93.1

GC content: 75.41

Gene sequence:

>663_bases
GTGCCCGGCACCGACGGTCGGGTCACGGTGGTCCTGCCCTGCCTCAACGAAGAGGAGTCGCTGCCGGGGGTGCTGGCCAC
CATCCCGCCCGGCTACCGGGCATTGGTGGTCGACAACAACAGCACCGACGACACCGCCGGCGTCGCGCGGCGGCACGGCG
CCCAAGTGGTCACCGAGACCCGGGCCGGATACGGGGCGGCCGTGCACGCGGGCGTGCTGGCGGCGACGACGCCCATCGTG
GCCGTCCTCGACGCCGACGGCTCGATGGACGGCGCCGACCTGCCCCGGCTGGTCGCCGCCTTGGAGGCGGGCGCCGACCT
GGTCACCGGCCGGCGCCGGCCGGTGCCCGGGCTGCGCTGGCCGTGGGTGGCCCGGGTGGGCACCGTGGTGATGAGCTGGC
GGCTGCGCACCCGGCACGGGCTGCCGGTGCACGACATCGCGCCCATGCGGGTGGCCCGCCGCGACGCGCTGCTGGGGCTC
GGCGTGGCCGACCGGCGTTCGGGCTACCCGCTGGAACTGCTGGTGCGCGCCGCGGCCGCCGGCTGGCGCGTGGTCGAACT
CGACGTCCGCTACGGCCCCCGCACCGGCGGCAAGTCGAAGGTCAGCGGTTCGCTGCGGGGCAGCATCACCGCGATCCTCG
ACTTCTGGAAGGTGATTTCGTGA

Upstream 100 bases:

>100_bases
CGAGGCGCCGCTGCCGACGCACACCCAGCAGACCGTGCCGCCCACGCATTCGCAGCCGCTGTTCCCGCAGGAGCCCCACA
CCCACCGCGGGTTCTGACCC

Downstream 100 bases:

>100_bases
TCCCGGTGACCCTGCTGGTGGTGGCCAAGGCCCCCGAGCCGGGCCGGGCCAAGACGCGGCTCGCGGCGGCGGTGGGGGAG
CGGGCCGCCGCCGAGATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MPGTDGRVTVVLPCLNEEESLPGVLATIPPGYRALVVDNNSTDDTAGVARRHGAQVVTETRAGYGAAVHAGVLAATTPIV
AVLDADGSMDGADLPRLVAALEAGADLVTGRRRPVPGLRWPWVARVGTVVMSWRLRTRHGLPVHDIAPMRVARRDALLGL
GVADRRSGYPLELLVRAAAAGWRVVELDVRYGPRTGGKSKVSGSLRGSITAILDFWKVIS

Sequences:

>Translated_220_residues
MPGTDGRVTVVLPCLNEEESLPGVLATIPPGYRALVVDNNSTDDTAGVARRHGAQVVTETRAGYGAAVHAGVLAATTPIV
AVLDADGSMDGADLPRLVAALEAGADLVTGRRRPVPGLRWPWVARVGTVVMSWRLRTRHGLPVHDIAPMRVARRDALLGL
GVADRRSGYPLELLVRAAAAGWRVVELDVRYGPRTGGKSKVSGSLRGSITAILDFWKVIS
>Mature_219_residues
PGTDGRVTVVLPCLNEEESLPGVLATIPPGYRALVVDNNSTDDTAGVARRHGAQVVTETRAGYGAAVHAGVLAATTPIVA
VLDADGSMDGADLPRLVAALEAGADLVTGRRRPVPGLRWPWVARVGTVVMSWRLRTRHGLPVHDIAPMRVARRDALLGLG
VADRRSGYPLELLVRAAAAGWRVVELDVRYGPRTGGKSKVSGSLRGSITAILDFWKVIS

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 23263; Mature: 23132

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGTDGRVTVVLPCLNEEESLPGVLATIPPGYRALVVDNNSTDDTAGVARRHGAQVVTET
CCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEC
RAGYGAAVHAGVLAATTPIVAVLDADGSMDGADLPRLVAALEAGADLVTGRRRPVPGLRW
CCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCC
PWVARVGTVVMSWRLRTRHGLPVHDIAPMRVARRDALLGLGVADRRSGYPLELLVRAAAA
HHHHHHHHHHHHEEHHHCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHC
GWRVVELDVRYGPRTGGKSKVSGSLRGSITAILDFWKVIS
CCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PGTDGRVTVVLPCLNEEESLPGVLATIPPGYRALVVDNNSTDDTAGVARRHGAQVVTET
CCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEC
RAGYGAAVHAGVLAATTPIVAVLDADGSMDGADLPRLVAALEAGADLVTGRRRPVPGLRW
CCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCC
PWVARVGTVVMSWRLRTRHGLPVHDIAPMRVARRDALLGLGVADRRSGYPLELLVRAAAA
HHHHHHHHHHHHEEHHHCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHC
GWRVVELDVRYGPRTGGKSKVSGSLRGSITAILDFWKVIS
CCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]