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The map label for this gene is ssuD [H]

Identifier: 41410111

GI number: 41410111

Start: 4474385

End: 4476316

Strand: Direct

Name: ssuD [H]

Synonym: MAP4013

Alternate gene names: 41410111

Gene position: 4474385-4476316 (Clockwise)

Preceding gene: 41410107

Following gene: 41410112

Centisome position: 92.64

GC content: 70.03

Gene sequence:

>1932_bases
TTGAGTCTGGCGTTTCACTGGTTTCTGCCGACCTACGGCGATTCGCGGAACCTGGTCGCGGGCGGGCACGGCACGCCGAT
GTCCGGTGACCGGCCGGCCACGCTGCGGTACCTGCACCAGATCTGCTCGGCCGCCGAGGACAACGGCTTCGAGGCCGTCC
TCACGCCGACGGGATTGTGGTGTGAGGACGCGTGGTTGACGACGGCGATGCTGGTCGAATCGACCGAGACGCTGAAGTTT
CTGGTCGCGTTCCGTCCCGGGCTGTTGAGCCCGACGCTGGCCTCGCAGATGGCCGGCACCTTCCAGCGGCACTCGCAGGG
ACGGCTGCTGCTGAACGTGGTCACCGGCGGCGAACCGCACGAGCAGCGCGCCTACGGCGACTTCCTGGACAAGGAGGCGC
GGTACGCGCGCACCGCCGAATTCCTGCACGTGGTGCGGCAACTGTGGACCTCGCCACAGCCGGTCACCTTTGCGGGAGAA
CACATCCGGGTCGAGGGCGCGCAACTGAACAACCCGCCCGACCCGATACCCGCGGTGTTCTTCGGCGGCTCCTCGGCGTC
GGCCGGACCGGTGGCCGCCAAGCACTCCGACGTCTATCTCACCTGGGGCGAACCGCTGACCGCGGTCGCCAAGAAGCTGG
ACTGGGTCCGCGGGCTGGCCGTCGACGCGGGGCGAATCCTGCAGTACGGCTTGCGGATTCACGTGATCAGCCGCGACACC
TCGGACGCGGCGTGGGCCGAGGCCGACCGGCTGCTGTCGGCGATCGACCCGGCCGACATCGAGCGGGTGCAGGCCAGCCT
GGCGCGCAGCGAGTCCGAGGGCCAGCGCCGGATGCGGGAGCTGCACGGCGGCAACAGCGGCAAACTGCTTGTCGGCCCGA
ACCTGTGGGCCGGGGTCGGCCTGGTGCGCGGGGGAGCGGGCACCGCCCTGGTCGGCTCGCACGCCGAGGTCGCCGAGCGG
CTGGCCGAATACGCCAAACTGGGCATCACCCACTTCATCCTGTCGGGGTATCCGCATCTGGAAGAGGCCTACTGGTTCGG
CGAGGGCGTGCTGCCGCTGCTGGAGCGGATGGGGTTGTGGGGCACCCCAATCGTCGGTCGCGTCCGGCGGCGACGACGCC
GTTCGCGGTGGCCTCGGCGCACTGACGGCCATGGCAGCCACCTTGCCCGCGCCGGCGCCCGCCGGGCTCGCCGACGGCCA
TCCGGTCGACGAATCCGCCGAGCAGCAGCGCCGCCGACTGCGCATCGTGGTGGCCGCCAGCCTGCTGGGCACCACCGTCG
AGTGGTACGACTTCTTCCTGTACGCCACGGCGGCCGGGCTGGTCTTCAACAAGGTGTTCTTCCCGAACGAAAGTTCTTTG
GTGGGAACGCTATTGGCGTTCGCGACGTTTGCCGTCGGATTCGTCATGCGGCCCATCGGGGGCCTGGTGTTCGGCCACAT
CGGCGATCGGATCGGCCGCAAGCGCAGCCTGGCGCTGACCATGCTCATCATGGGCGGCGCGACCGCGCTGATCGGGGTGT
TGCCGACGGCCGCGCAGATCGGGGCCTGGGCGCCGGTGCTGCTGCTGGTGTTGCGGGTGCTGCAGGGGTTCGCGCTCGGC
GGCGAGTGGGGCGGGGCGGTGCTGCTGGCCGTCGAACACAGCCCGGGCGACCGGCGCGGCCGCTACGGGGCGGTGCCGCA
GGTCGGGCTGGCACTCGGATTGGCTTTGGGCACAGGCATATTCGCTTTCCTGCAGATCGTGCTGGGCCCGGCCCGGTTCC
TGTCCTACGGCTGGCGCATCGGGTTCCTGTTGAGCGTACTGCTGGTGGCCATCGGCATCGTGGTGCGGTTGCGGGTGGAA
GAGACACCGGCGTTCCGGGAACTGCAGGACCTGCAGGCCGCGTCCACCGTGCCGATCCGGGACATCCTGCGCGAGCGGCG
TTCCCGGCGTAA

Upstream 100 bases:

>100_bases
TGCAATCTCGAAGGTTTCAACCCTGGCCCGCCGGCGGCACCGCGACCAGGATGGAACCCCTGTGCACGGGGGGCGAACGC
GCAACGAAGAGGATTGTGAA

Downstream 100 bases:

>100_bases
CACGGTGCTGGGGCTGCTGTCACGGTGGGCCGAGGGCTCGGCGTTCAACACCTGGGGCGTGTTCGCCATCAGCTACGCCA
CCGGGGCGCTGGGACTCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase [H]

Number of amino acids: Translated: 643; Mature: 642

Protein sequence:

>643_residues
MSLAFHWFLPTYGDSRNLVAGGHGTPMSGDRPATLRYLHQICSAAEDNGFEAVLTPTGLWCEDAWLTTAMLVESTETLKF
LVAFRPGLLSPTLASQMAGTFQRHSQGRLLLNVVTGGEPHEQRAYGDFLDKEARYARTAEFLHVVRQLWTSPQPVTFAGE
HIRVEGAQLNNPPDPIPAVFFGGSSASAGPVAAKHSDVYLTWGEPLTAVAKKLDWVRGLAVDAGRILQYGLRIHVISRDT
SDAAWAEADRLLSAIDPADIERVQASLARSESEGQRRMRELHGGNSGKLLVGPNLWAGVGLVRGGAGTALVGSHAEVAER
LAEYAKLGITHFILSGYPHLEEAYWFGEGVLPLLERMGLWGTPIVGRVRRRRRRSRWPRRTDGHGSHLARAGARRARRRP
SGRRIRRAAAPPTAHRGGRQPAGHHRRVVRLLPVRHGGRAGLQQGVLPERKFFGGNAIGVRDVCRRIRHAAHRGPGVRPH
RRSDRPQAQPGADHAHHGRRDRADRGVADGRADRGLGAGAAAGVAGAAGVRARRRVGRGGAAGRRTQPGRPARPLRGGAA
GRAGTRIGFGHRHIRFPADRAGPGPVPVLRLAHRVPVERTAGGHRHRGAVAGGRDTGVPGTAGPAGRVHRADPGHPARAA
FPA

Sequences:

>Translated_643_residues
MSLAFHWFLPTYGDSRNLVAGGHGTPMSGDRPATLRYLHQICSAAEDNGFEAVLTPTGLWCEDAWLTTAMLVESTETLKF
LVAFRPGLLSPTLASQMAGTFQRHSQGRLLLNVVTGGEPHEQRAYGDFLDKEARYARTAEFLHVVRQLWTSPQPVTFAGE
HIRVEGAQLNNPPDPIPAVFFGGSSASAGPVAAKHSDVYLTWGEPLTAVAKKLDWVRGLAVDAGRILQYGLRIHVISRDT
SDAAWAEADRLLSAIDPADIERVQASLARSESEGQRRMRELHGGNSGKLLVGPNLWAGVGLVRGGAGTALVGSHAEVAER
LAEYAKLGITHFILSGYPHLEEAYWFGEGVLPLLERMGLWGTPIVGRVRRRRRRSRWPRRTDGHGSHLARAGARRARRRP
SGRRIRRAAAPPTAHRGGRQPAGHHRRVVRLLPVRHGGRAGLQQGVLPERKFFGGNAIGVRDVCRRIRHAAHRGPGVRPH
RRSDRPQAQPGADHAHHGRRDRADRGVADGRADRGLGAGAAAGVAGAAGVRARRRVGRGGAAGRRTQPGRPARPLRGGAA
GRAGTRIGFGHRHIRFPADRAGPGPVPVLRLAHRVPVERTAGGHRHRGAVAGGRDTGVPGTAGPAGRVHRADPGHPARAA
FPA
>Mature_642_residues
SLAFHWFLPTYGDSRNLVAGGHGTPMSGDRPATLRYLHQICSAAEDNGFEAVLTPTGLWCEDAWLTTAMLVESTETLKFL
VAFRPGLLSPTLASQMAGTFQRHSQGRLLLNVVTGGEPHEQRAYGDFLDKEARYARTAEFLHVVRQLWTSPQPVTFAGEH
IRVEGAQLNNPPDPIPAVFFGGSSASAGPVAAKHSDVYLTWGEPLTAVAKKLDWVRGLAVDAGRILQYGLRIHVISRDTS
DAAWAEADRLLSAIDPADIERVQASLARSESEGQRRMRELHGGNSGKLLVGPNLWAGVGLVRGGAGTALVGSHAEVAERL
AEYAKLGITHFILSGYPHLEEAYWFGEGVLPLLERMGLWGTPIVGRVRRRRRRSRWPRRTDGHGSHLARAGARRARRRPS
GRRIRRAAAPPTAHRGGRQPAGHHRRVVRLLPVRHGGRAGLQQGVLPERKFFGGNAIGVRDVCRRIRHAAHRGPGVRPHR
RSDRPQAQPGADHAHHGRRDRADRGVADGRADRGLGAGAAAGVAGAAGVRARRRVGRGGAAGRRTQPGRPARPLRGGAAG
RAGTRIGFGHRHIRFPADRAGPGPVPVLRLAHRVPVERTAGGHRHRGAVAGGRDTGVPGTAGPAGRVHRADPGHPARAAF
PA

Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SsuD family [H]

Homologues:

Organism=Escherichia coli, GI1787166, Length=357, Percent_Identity=51.2605042016807, Blast_Score=332, Evalue=4e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019911
- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: =1.14.14.5 [H]

Molecular weight: Translated: 69220; Mature: 69088

Theoretical pI: Translated: 12.11; Mature: 12.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAFHWFLPTYGDSRNLVAGGHGTPMSGDRPATLRYLHQICSAAEDNGFEAVLTPTGLW
CCEEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCC
CEDAWLTTAMLVESTETLKFLVAFRPGLLSPTLASQMAGTFQRHSQGRLLLNVVTGGEPH
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCH
EQRAYGDFLDKEARYARTAEFLHVVRQLWTSPQPVTFAGEHIRVEGAQLNNPPDPIPAVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCCCCCEEE
FGGSSASAGPVAAKHSDVYLTWGEPLTAVAKKLDWVRGLAVDAGRILQYGLRIHVISRDT
ECCCCCCCCCCEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
SDAAWAEADRLLSAIDPADIERVQASLARSESEGQRRMRELHGGNSGKLLVGPNLWAGVG
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHH
LVRGGAGTALVGSHAEVAERLAEYAKLGITHFILSGYPHLEEAYWFGEGVLPLLERMGLW
EEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHCCCC
GTPIVGRVRRRRRRSRWPRRTDGHGSHLARAGARRARRRPSGRRIRRAAAPPTAHRGGRQ
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHCCCCC
PAGHHRRVVRLLPVRHGGRAGLQQGVLPERKFFGGNAIGVRDVCRRIRHAAHRGPGVRPH
CCHHHHHHHHEECCCCCCHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC
RRSDRPQAQPGADHAHHGRRDRADRGVADGRADRGLGAGAAAGVAGAAGVRARRRVGRGG
CCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
AAGRRTQPGRPARPLRGGAAGRAGTRIGFGHRHIRFPADRAGPGPVPVLRLAHRVPVERT
CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCHHHHHHHHHCCCHHC
AGGHRHRGAVAGGRDTGVPGTAGPAGRVHRADPGHPARAAFPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLAFHWFLPTYGDSRNLVAGGHGTPMSGDRPATLRYLHQICSAAEDNGFEAVLTPTGLW
CEEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCC
CEDAWLTTAMLVESTETLKFLVAFRPGLLSPTLASQMAGTFQRHSQGRLLLNVVTGGEPH
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCH
EQRAYGDFLDKEARYARTAEFLHVVRQLWTSPQPVTFAGEHIRVEGAQLNNPPDPIPAVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCCCCCEEE
FGGSSASAGPVAAKHSDVYLTWGEPLTAVAKKLDWVRGLAVDAGRILQYGLRIHVISRDT
ECCCCCCCCCCEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
SDAAWAEADRLLSAIDPADIERVQASLARSESEGQRRMRELHGGNSGKLLVGPNLWAGVG
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHH
LVRGGAGTALVGSHAEVAERLAEYAKLGITHFILSGYPHLEEAYWFGEGVLPLLERMGLW
EEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHCCCC
GTPIVGRVRRRRRRSRWPRRTDGHGSHLARAGARRARRRPSGRRIRRAAAPPTAHRGGRQ
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHCCCCC
PAGHHRRVVRLLPVRHGGRAGLQQGVLPERKFFGGNAIGVRDVCRRIRHAAHRGPGVRPH
CCHHHHHHHHEECCCCCCHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC
RRSDRPQAQPGADHAHHGRRDRADRGVADGRADRGLGAGAAAGVAGAAGVRARRRVGRGG
CCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
AAGRRTQPGRPARPLRGGAAGRAGTRIGFGHRHIRFPADRAGPGPVPVLRLAHRVPVERT
CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCHHHHHHHHHCCCHHC
AGGHRHRGAVAGGRDTGVPGTAGPAGRVHRADPGHPARAAFPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA