| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410086
Identifier: 41410086
GI number: 41410086
Start: 4446083
End: 4447051
Strand: Direct
Name: 41410086
Synonym: MAP3988
Alternate gene names: NA
Gene position: 4446083-4447051 (Clockwise)
Preceding gene: 41410085
Following gene: 41410087
Centisome position: 92.06
GC content: 71.62
Gene sequence:
>969_bases ATGACCGGACCGCATTCCGAGACCGAGAGCCCAGGCACTCGGCCGATCTCGGTTGCCGAATTGCTGGCCAGAAACGGAAC CATCGGCGCCCCGGCGGTCACCCGGCGGCGTCGCCGGCGGCGCGGCGACAGCGACGCGGTGACCGTGGCCGAGCTCACCG GCGAGATCCCGGTCATCCGTGACGACGAGCCCGACGACCAACCCGGCGCCACCGACACCGTCGACACGGCCGCACCCGCC CAACCCGTGGCCGAATCCGCCGAGCCGGTAGCCGAAGACGAGCCCAAGACCCCCTACTGGTCCGAGCCCGAGCCGCGCTG GCCCAAGTCGCCGCCGCAGCCCAAGCGCGCCCCCGGCCCCGAGCGCAGCGCCTACCCGCGGCCGCTGCCCGAGCCGGGCC CGTCCGCCAACGGCACCGGCCGGCGATCCTCGGGCGCCGAGGACATGAGCCCCGACCCGATGGACCACTACGCCGACATT CCGGTGGACGTGATGGACTCCGAGGTGCGCGAGGCCGAACCGGCGTTGGAGGACTCCGCGTACGTGCGCTCGTATCTGCA ATCGGATTCGGCGCTCGACGACGACCTCGACGAGGATCTCGACGACGACCACGCGGATGCCGCGACGCTGACCGACGAGG ACCTCGACGCGGCGCACCTCGAGGACGAGGACGCCGAGGCGGCACACCCGGCGCCCGGCAGGCTCGAGGCGATCTGGCGC GGCAGTGTGGTTGTGCTGCAATCGATTCTGGCCGTCGCGTTCGGCGCCGGGCTGTTCGTGGCCTTCGACCAGCTGTGGCG CTGGAACAGCATCGTGGCCCTGGTGCTCTCGGTGCTGGTCATCCTCGGCCTGGTGGTCGGGGTGCGGGTGGTGCGCAAGA CCGAGGACATCGCCAGCACGTTGATCGCGGTCGCGGTGGGTGCGTTGATCACCCTGGGGCCCTTGGCGCTGTCGTTGCAG TCGGGCTAG
Upstream 100 bases:
>100_bases ACAGCGAAGCCGACGGAACGGCCCTCATGGAGCCGTCCGTGCGTAATGCTGGAGGTCAGGTAGTTGATCGGAATCAGAAC CGATCGAGAGGCGACAAACC
Downstream 100 bases:
>100_bases CGGCACCGACAGACAGTGCGCCCTGCCATCAAAGTCGGCCTGTCCACGGCTTCGGTGTATCCGTTGCGGGCCGAGGCCGC GTTCGAATACGCGGCCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTGPHSETESPGTRPISVAELLARNGTIGAPAVTRRRRRRRGDSDAVTVAELTGEIPVIRDDEPDDQPGATDTVDTAAPA QPVAESAEPVAEDEPKTPYWSEPEPRWPKSPPQPKRAPGPERSAYPRPLPEPGPSANGTGRRSSGAEDMSPDPMDHYADI PVDVMDSEVREAEPALEDSAYVRSYLQSDSALDDDLDEDLDDDHADAATLTDEDLDAAHLEDEDAEAAHPAPGRLEAIWR GSVVVLQSILAVAFGAGLFVAFDQLWRWNSIVALVLSVLVILGLVVGVRVVRKTEDIASTLIAVAVGALITLGPLALSLQ SG
Sequences:
>Translated_322_residues MTGPHSETESPGTRPISVAELLARNGTIGAPAVTRRRRRRRGDSDAVTVAELTGEIPVIRDDEPDDQPGATDTVDTAAPA QPVAESAEPVAEDEPKTPYWSEPEPRWPKSPPQPKRAPGPERSAYPRPLPEPGPSANGTGRRSSGAEDMSPDPMDHYADI PVDVMDSEVREAEPALEDSAYVRSYLQSDSALDDDLDEDLDDDHADAATLTDEDLDAAHLEDEDAEAAHPAPGRLEAIWR GSVVVLQSILAVAFGAGLFVAFDQLWRWNSIVALVLSVLVILGLVVGVRVVRKTEDIASTLIAVAVGALITLGPLALSLQ SG >Mature_321_residues TGPHSETESPGTRPISVAELLARNGTIGAPAVTRRRRRRRGDSDAVTVAELTGEIPVIRDDEPDDQPGATDTVDTAAPAQ PVAESAEPVAEDEPKTPYWSEPEPRWPKSPPQPKRAPGPERSAYPRPLPEPGPSANGTGRRSSGAEDMSPDPMDHYADIP VDVMDSEVREAEPALEDSAYVRSYLQSDSALDDDLDEDLDDDHADAATLTDEDLDAAHLEDEDAEAAHPAPGRLEAIWRG SVVVLQSILAVAFGAGLFVAFDQLWRWNSIVALVLSVLVILGLVVGVRVVRKTEDIASTLIAVAVGALITLGPLALSLQS G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0497 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34318; Mature: 34187
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPHSETESPGTRPISVAELLARNGTIGAPAVTRRRRRRRGDSDAVTVAELTGEIPVIR CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEHHHHCCCCCEEC DDEPDDQPGATDTVDTAAPAQPVAESAEPVAEDEPKTPYWSEPEPRWPKSPPQPKRAPGP CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ERSAYPRPLPEPGPSANGTGRRSSGAEDMSPDPMDHYADIPVDVMDSEVREAEPALEDSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCHHHHHHH YVRSYLQSDSALDDDLDEDLDDDHADAATLTDEDLDAAHLEDEDAEAAHPAPGRLEAIWR HHHHHHHCCCCCCCHHHHCCCCCCCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHC GSVVVLQSILAVAFGAGLFVAFDQLWRWNSIVALVLSVLVILGLVVGVRVVRKTEDIAST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAVAVGALITLGPLALSLQSG HHHHHHHHHHHHHHHHHEECCC >Mature Secondary Structure TGPHSETESPGTRPISVAELLARNGTIGAPAVTRRRRRRRGDSDAVTVAELTGEIPVIR CCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEHHHHCCCCCEEC DDEPDDQPGATDTVDTAAPAQPVAESAEPVAEDEPKTPYWSEPEPRWPKSPPQPKRAPGP CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ERSAYPRPLPEPGPSANGTGRRSSGAEDMSPDPMDHYADIPVDVMDSEVREAEPALEDSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCHHHHHHH YVRSYLQSDSALDDDLDEDLDDDHADAATLTDEDLDAAHLEDEDAEAAHPAPGRLEAIWR HHHHHHHCCCCCCCHHHHCCCCCCCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHC GSVVVLQSILAVAFGAGLFVAFDQLWRWNSIVALVLSVLVILGLVVGVRVVRKTEDIAST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAVAVGALITLGPLALSLQSG HHHHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]