| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mshA
Identifier: 41410077
GI number: 41410077
Start: 4437874
End: 4439199
Strand: Direct
Name: mshA
Synonym: MAP3979
Alternate gene names: 41410077
Gene position: 4437874-4439199 (Clockwise)
Preceding gene: 41410076
Following gene: 41410078
Centisome position: 91.89
GC content: 73.38
Gene sequence:
>1326_bases GTGTGCTGCGCACTTGGGCCCGGTGGCGAACCATCCTGTAAAGATGACAGAGTGCGGCACGATGACGTCTTCCGGCTGAA TGAGCCGCGCCGGGTGGCCGTGCTGGCGGTCCACACCTCGCCACTGGCCCAGCCCGGCACCGGCGACGCGGGCGGCATGA ACGTCTACGTGCTGCAGACCGCCCTGCACCTGGCACGCCGCGGCATCGAGGTGGAGATCTTCACCCGGGCGACCGCCTCG GCCGACCCGCCGGTGCAGCGGGTGGCGCCCGGCGTGCTGGTGCGCAACGTGGTGGCCGGGCCGTTCGAGGGCCTGGACAA ATACGATCTGCCCACCCAGCTGTGCGCGTTCGCGGCCGGAGTGCTGCGCGCCGAAGCGTCGCACGAGCCGGGTTACTACG ACATCGTGCACTCGCACTACTGGCTGTCCGGTCAGGTCGGCTGGCTGGCGCGCGACCGCTGGGCGGTGCCGCTGGTGCAC ACCGCGCACACCCTGGCCGCGGTGAAAAATGCCGCGCTGGCGCAAGGGGATTCGCCCGAGCCGCCGCTGCGCACGGTGGG CGAGCAGCAGGTGGTCGACGAGGCCGACCGGCTGATCGTCAACACCGACGACGAAGCGCGGCAACTGATTTCGATCCACC ACGCCGACCCGGCCAGGATCGACGTCGTGCATCCCGGGGTGGACCTCGACGTGTTCCGACCCGGCGACCGTCGCGCCGCC CGGGCCGCGCTGGGGCTGCCGCTCGACAAGGACATCGTGGCGTTCGTCGGCCGCATCCAGCCGCTGAAGGCCCCCGACAT CGTCTTGCGTGCCGCCGCGAAACTGCCCGGGGTGCGCATCGTGGTGGCCGGCGGGCCGTCGGGCACCGGCCTGGCCTCGC CGGACGGATTGGCCCGGCTGGCCGACGAACTCGGCATCTCCGCGCGGGTCACGTTCCTGCCCCCGCAGTCCCGCCCGAAC CTGGCCACTCTGTTCCAGGCGGCCAATCTTGTTGCAGTGCCGAGCTATTCGGAGTCCTTCGGCCTGGTGGCGCTGGAGGC GCAGGCGTGCGGCACCCCGGTGGCCGCGGCCGCGGTCGGCGGGCTGCCGGTGGCCGTGCGCGACGGCGTCACCGGCACCC TGGTGGCCGGGCACGACGTCGACCACTGGGCCGACGCGCTGGCCGGGCTGCTGCGCGCGCCCGCCCCGGCGGCCGCGGCG ATGAGCCGCGCGGCGGCCGCGCACGCCGCCACCTTCTCCTGGGACCACACCACGGACGCGCTGCTGGCCAGCTACCGGCG CGCGATCCGCGAGTACACGACCGAGCGCCGGGGGGTGGGCGCATGA
Upstream 100 bases:
>100_bases GTACGCCGATCCGCTGAGCGCGATGCGGCGGGCCGGGGCGCTGGACGCCCGGCTGCGCGAGGTCGCGCGGGACGAGTCGT CGGCCTGACCCGACGCCGCC
Downstream 100 bases:
>100_bases GCGCCACCGTCGAGCGGGTGATCGAGGACACGCTGCAGGCCAGCGGCCTGACCTACTCGAAACACGCTGGGGCGCATGGC GGTCCGTCGGGCCTGGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MCCALGPGGEPSCKDDRVRHDDVFRLNEPRRVAVLAVHTSPLAQPGTGDAGGMNVYVLQTALHLARRGIEVEIFTRATAS ADPPVQRVAPGVLVRNVVAGPFEGLDKYDLPTQLCAFAAGVLRAEASHEPGYYDIVHSHYWLSGQVGWLARDRWAVPLVH TAHTLAAVKNAALAQGDSPEPPLRTVGEQQVVDEADRLIVNTDDEARQLISIHHADPARIDVVHPGVDLDVFRPGDRRAA RAALGLPLDKDIVAFVGRIQPLKAPDIVLRAAAKLPGVRIVVAGGPSGTGLASPDGLARLADELGISARVTFLPPQSRPN LATLFQAANLVAVPSYSESFGLVALEAQACGTPVAAAAVGGLPVAVRDGVTGTLVAGHDVDHWADALAGLLRAPAPAAAA MSRAAAAHAATFSWDHTTDALLASYRRAIREYTTERRGVGA
Sequences:
>Translated_441_residues MCCALGPGGEPSCKDDRVRHDDVFRLNEPRRVAVLAVHTSPLAQPGTGDAGGMNVYVLQTALHLARRGIEVEIFTRATAS ADPPVQRVAPGVLVRNVVAGPFEGLDKYDLPTQLCAFAAGVLRAEASHEPGYYDIVHSHYWLSGQVGWLARDRWAVPLVH TAHTLAAVKNAALAQGDSPEPPLRTVGEQQVVDEADRLIVNTDDEARQLISIHHADPARIDVVHPGVDLDVFRPGDRRAA RAALGLPLDKDIVAFVGRIQPLKAPDIVLRAAAKLPGVRIVVAGGPSGTGLASPDGLARLADELGISARVTFLPPQSRPN LATLFQAANLVAVPSYSESFGLVALEAQACGTPVAAAAVGGLPVAVRDGVTGTLVAGHDVDHWADALAGLLRAPAPAAAA MSRAAAAHAATFSWDHTTDALLASYRRAIREYTTERRGVGA >Mature_441_residues MCCALGPGGEPSCKDDRVRHDDVFRLNEPRRVAVLAVHTSPLAQPGTGDAGGMNVYVLQTALHLARRGIEVEIFTRATAS ADPPVQRVAPGVLVRNVVAGPFEGLDKYDLPTQLCAFAAGVLRAEASHEPGYYDIVHSHYWLSGQVGWLARDRWAVPLVH TAHTLAAVKNAALAQGDSPEPPLRTVGEQQVVDEADRLIVNTDDEARQLISIHHADPARIDVVHPGVDLDVFRPGDRRAA RAALGLPLDKDIVAFVGRIQPLKAPDIVLRAAAKLPGVRIVVAGGPSGTGLASPDGLARLADELGISARVTFLPPQSRPN LATLFQAANLVAVPSYSESFGLVALEAQACGTPVAAAAVGGLPVAVRDGVTGTLVAGHDVDHWADALAGLLRAPAPAAAA MSRAAAAHAATFSWDHTTDALLASYRRAIREYTTERRGVGA
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily
Homologues:
Organism=Escherichia coli, GI1790061, Length=192, Percent_Identity=27.0833333333333, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MSHA_MYCPA (Q73SU4)
Other databases:
- EMBL: AE016958 - RefSeq: NP_962913.1 - ProteinModelPortal: Q73SU4 - SMR: Q73SU4 - EnsemblBacteria: EBMYCT00000037683 - GeneID: 2717714 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP3979 - NMPDR: fig|262316.1.peg.3979 - GeneTree: EBGT00050000015521 - HOGENOM: HBG726846 - OMA: PLKAPDV - ProtClustDB: CLSK871811 - HAMAP: MF_01695 - InterPro: IPR001296 - InterPro: IPR017814 - TIGRFAMs: TIGR03449
Pfam domain/function: PF00534 Glycos_transf_1
EC number: =2.4.1.250
Molecular weight: Translated: 46334; Mature: 46334
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: BINDING 38-38 BINDING 52-52 BINDING 107-107 BINDING 140-140 BINDING 164-164 BINDING 184-184 BINDING 258-258 BINDING 263-263 BINDING 316-316 BINDING 338-338 BINDING 346-346
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCCALGPGGEPSCKDDRVRHDDVFRLNEPRRVAVLAVHTSPLAQPGTGDAGGMNVYVLQT CEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEHHHHH ALHLARRGIEVEIFTRATASADPPVQRVAPGVLVRNVVAGPFEGLDKYDLPTQLCAFAAG HHHHHHCCCEEEEEEECCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH VLRAEASHEPGYYDIVHSHYWLSGQVGWLARDRWAVPLVHTAHTLAAVKNAALAQGDSPE HHHHCCCCCCCEEEEEECEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PPLRTVGEQQVVDEADRLIVNTDDEARQLISIHHADPARIDVVHPGVDLDVFRPGDRRAA CCHHHCCHHHHHHHHCEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCHHHH RAALGLPLDKDIVAFVGRIQPLKAPDIVLRAAAKLPGVRIVVAGGPSGTGLASPDGLARL HHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHH ADELGISARVTFLPPQSRPNLATLFQAANLVAVPSYSESFGLVALEAQACGTPVAAAAVG HHHCCCEEEEEEECCCCCCCHHHHHHHCCEEEECCCCCCCCEEEEEHHHCCCCHHHHHHC GLPVAVRDGVTGTLVAGHDVDHWADALAGLLRAPAPAAAAMSRAAAAHAATFSWDHTTDA CCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCHHHH LLASYRRAIREYTTERRGVGA HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MCCALGPGGEPSCKDDRVRHDDVFRLNEPRRVAVLAVHTSPLAQPGTGDAGGMNVYVLQT CEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEHHHHH ALHLARRGIEVEIFTRATASADPPVQRVAPGVLVRNVVAGPFEGLDKYDLPTQLCAFAAG HHHHHHCCCEEEEEEECCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH VLRAEASHEPGYYDIVHSHYWLSGQVGWLARDRWAVPLVHTAHTLAAVKNAALAQGDSPE HHHHCCCCCCCEEEEEECEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PPLRTVGEQQVVDEADRLIVNTDDEARQLISIHHADPARIDVVHPGVDLDVFRPGDRRAA CCHHHCCHHHHHHHHCEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCHHHH RAALGLPLDKDIVAFVGRIQPLKAPDIVLRAAAKLPGVRIVVAGGPSGTGLASPDGLARL HHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHH ADELGISARVTFLPPQSRPNLATLFQAANLVAVPSYSESFGLVALEAQACGTPVAAAAVG HHHCCCEEEEEEECCCCCCCHHHHHHHCCEEEECCCCCCCCEEEEEHHHCCCCHHHHHHC GLPVAVRDGVTGTLVAGHDVDHWADALAGLLRAPAPAAAAMSRAAAAHAATFSWDHTTDA CCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCHHHH LLASYRRAIREYTTERRGVGA HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA