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The map label for this gene is 41410058

Identifier: 41410058

GI number: 41410058

Start: 4420171

End: 4420965

Strand: Direct

Name: 41410058

Synonym: MAP3960

Alternate gene names: NA

Gene position: 4420171-4420965 (Clockwise)

Preceding gene: 41410055

Following gene: 41410059

Centisome position: 91.52

GC content: 65.79

Gene sequence:

>795_bases
GTGAGCCTGGACAAACAAATGATGCCGGTGCCCGACGGTCACCCCGACGTTTTCGATCGCGAATGGCCGCTGCGGGTCGG
CGACATCGACCGCACCGGGCGGCTGCGGCTGGACGCCGCGGCCCGCCACATTCAGGACATCGGCCAGGACCAGCTGCGGG
AGATGGGTTTCGAGGAGACCCACCCGCTGTGGATCGTCCGGCGCACCATGCTGGACCTGATCCGGCCGATCGAGTTCAAC
GACATGCTGCGGCTGCGCCGGTGGTGCTCGGGGACCTCGAACCGGTGGTGCGAGATGCGGGTCCGCATCGACGGCCGCAA
GGGCGGCCTTATCGAGTCCGAGGCGTTCTGGATCAACATCAACCGGGAAACCCAGATGCCGTCGCGGATCGCCGACGACT
TCCTGGCCGGCCTGCACAAGACGACCTCGGTGGACCGGCTGCGCTGGAAGCCCTACCTCAAACCGGCCAGCCGCGACGAC
GCGGTCGAGATCCACGAGTTCCCGGTCCGGGTCACCGACATCGACCTGTTCGACCACATGAACAACTCCGTGTACTGGAG
CGTCATCGAGGACTACCTGGCGTCGCACACCGAGCTGATGCGGACGCCGTTGCGCGTCACCATCGAACACGAGGCGCCGG
TGGCCCTGGGCGACAAACTGGAGATCATCTCCCACGTCCACCCCGCCGGATCCACCGATCAATTCGGTCCCGAGCTGGCC
GATCGCACTGTTACAACGCTCACATACGCCGTCGGCGACGAGGCCAAAGCCGTCGCCGCGATCTTTGCTCGCTAA

Upstream 100 bases:

>100_bases
CGTCGCGATTGGTGTTCGGCGCACGTCGTTGGCATGATTCGAGCGGGGCCGCAGGCCTTAGCCTGGGGGCACCGACGAGG
AGGAAACGGGGAGCGACACC

Downstream 100 bases:

>100_bases
CAGTACAAGCGTCCGGGTTAATTTGCGGTGTGACCTGCGGCTTTGGGGTTACTGACGGGTAGCTTCTGAAACGGTTAAGT
TCGTTACCGGCTTAGCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSLDKQMMPVPDGHPDVFDREWPLRVGDIDRTGRLRLDAAARHIQDIGQDQLREMGFEETHPLWIVRRTMLDLIRPIEFN
DMLRLRRWCSGTSNRWCEMRVRIDGRKGGLIESEAFWININRETQMPSRIADDFLAGLHKTTSVDRLRWKPYLKPASRDD
AVEIHEFPVRVTDIDLFDHMNNSVYWSVIEDYLASHTELMRTPLRVTIEHEAPVALGDKLEIISHVHPAGSTDQFGPELA
DRTVTTLTYAVGDEAKAVAAIFAR

Sequences:

>Translated_264_residues
MSLDKQMMPVPDGHPDVFDREWPLRVGDIDRTGRLRLDAAARHIQDIGQDQLREMGFEETHPLWIVRRTMLDLIRPIEFN
DMLRLRRWCSGTSNRWCEMRVRIDGRKGGLIESEAFWININRETQMPSRIADDFLAGLHKTTSVDRLRWKPYLKPASRDD
AVEIHEFPVRVTDIDLFDHMNNSVYWSVIEDYLASHTELMRTPLRVTIEHEAPVALGDKLEIISHVHPAGSTDQFGPELA
DRTVTTLTYAVGDEAKAVAAIFAR
>Mature_263_residues
SLDKQMMPVPDGHPDVFDREWPLRVGDIDRTGRLRLDAAARHIQDIGQDQLREMGFEETHPLWIVRRTMLDLIRPIEFND
MLRLRRWCSGTSNRWCEMRVRIDGRKGGLIESEAFWININRETQMPSRIADDFLAGLHKTTSVDRLRWKPYLKPASRDDA
VEIHEFPVRVTDIDLFDHMNNSVYWSVIEDYLASHTELMRTPLRVTIEHEAPVALGDKLEIISHVHPAGSTDQFGPELAD
RTVTTLTYAVGDEAKAVAAIFAR

Specific function: Unknown

COG id: COG3884

COG function: function code I; Acyl-ACP thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002864 [H]

Pfam domain/function: PF01643 Acyl-ACP_TE [H]

EC number: NA

Molecular weight: Translated: 30454; Mature: 30323

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDKQMMPVPDGHPDVFDREWPLRVGDIDRTGRLRLDAAARHIQDIGQDQLREMGFEET
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEHHHHHHHHHHCCHHHHHHCCCCCC
HPLWIVRRTMLDLIRPIEFNDMLRLRRWCSGTSNRWCEMRVRIDGRKGGLIESEAFWINI
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEECCEEEEEE
NRETQMPSRIADDFLAGLHKTTSVDRLRWKPYLKPASRDDAVEIHEFPVRVTDIDLFDHM
CCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEECCCEEEEEEHHHHHC
NNSVYWSVIEDYLASHTELMRTPLRVTIEHEAPVALGDKLEIISHVHPAGSTDQFGPELA
CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCHHHHHHHCCCCCCCCCCCHHHH
DRTVTTLTYAVGDEAKAVAAIFAR
HCCEEEEEEECCCCHHHHHHHHCC
>Mature Secondary Structure 
SLDKQMMPVPDGHPDVFDREWPLRVGDIDRTGRLRLDAAARHIQDIGQDQLREMGFEET
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEHHHHHHHHHHCCHHHHHHCCCCCC
HPLWIVRRTMLDLIRPIEFNDMLRLRRWCSGTSNRWCEMRVRIDGRKGGLIESEAFWINI
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEECCEEEEEE
NRETQMPSRIADDFLAGLHKTTSVDRLRWKPYLKPASRDDAVEIHEFPVRVTDIDLFDHM
CCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEECCCEEEEEEHHHHHC
NNSVYWSVIEDYLASHTELMRTPLRVTIEHEAPVALGDKLEIISHVHPAGSTDQFGPELA
CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCHHHHHHHCCCCCCCCCCCHHHH
DRTVTTLTYAVGDEAKAVAAIFAR
HCCEEEEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]