Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41410052

Identifier: 41410052

GI number: 41410052

Start: 4415406

End: 4415684

Strand: Direct

Name: 41410052

Synonym: MAP3954

Alternate gene names: NA

Gene position: 4415406-4415684 (Clockwise)

Preceding gene: 41410051

Following gene: 41410053

Centisome position: 91.42

GC content: 73.12

Gene sequence:

>279_bases
GTGATTCCTCTTCCGCGTCCCTGGGTGCTGGCCGGCGCCATGCTGATCGGAAGCGCGGTCGGGCTGTTGGCCGGCGTGGC
GTTCACCGTCGCCGTGCAGGCCCACGTTCGCCCGGACCTCGCGATCGCGGCGGTGGTCGGCATCCCCAGCGTGATCGGCC
TGGCCCTGATCCTGTTCTCCGGGCGGCGCTGGGTCACCACCCTGGGCGCGTTCGTGCTGGCGGTGGCGCCCGGCTGGTTC
GGGGTGCTCGTCGCGTTGCGGGTGACCGCCGGTGGCTGA

Upstream 100 bases:

>100_bases
TACCAGCGCGGTGAGCGGCCCGCGGCGCGCGGCGCGGTGGTGGCCGACGCGGCCTGCAGGACCTGCCCTTGACGCCGGTC
ACCGCAGTACAGTCGAGACG

Downstream 100 bases:

>100_bases
CGACAAGGACGCCTCGAGCCCGGGCACCGAGGCGTTCGTGCCCGACTTCTCCGATGACGACGACGCCGCCGACACCGGCA
CCCAGTCGTGGGCGCCGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MIPLPRPWVLAGAMLIGSAVGLLAGVAFTVAVQAHVRPDLAIAAVVGIPSVIGLALILFSGRRWVTTLGAFVLAVAPGWF
GVLVALRVTAGG

Sequences:

>Translated_92_residues
MIPLPRPWVLAGAMLIGSAVGLLAGVAFTVAVQAHVRPDLAIAAVVGIPSVIGLALILFSGRRWVTTLGAFVLAVAPGWF
GVLVALRVTAGG
>Mature_92_residues
MIPLPRPWVLAGAMLIGSAVGLLAGVAFTVAVQAHVRPDLAIAAVVGIPSVIGLALILFSGRRWVTTLGAFVLAVAPGWF
GVLVALRVTAGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9296; Mature: 9296

Theoretical pI: Translated: 12.68; Mature: 12.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLPRPWVLAGAMLIGSAVGLLAGVAFTVAVQAHVRPDLAIAAVVGIPSVIGLALILFS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
GRRWVTTLGAFVLAVAPGWFGVLVALRVTAGG
CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MIPLPRPWVLAGAMLIGSAVGLLAGVAFTVAVQAHVRPDLAIAAVVGIPSVIGLALILFS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
GRRWVTTLGAFVLAVAPGWFGVLVALRVTAGG
CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA