Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410035

Identifier: 41410035

GI number: 41410035

Start: 4397786

End: 4398586

Strand: Direct

Name: 41410035

Synonym: MAP3937

Alternate gene names: NA

Gene position: 4397786-4398586 (Clockwise)

Preceding gene: 41410034

Following gene: 41410039

Centisome position: 91.06

GC content: 70.79

Gene sequence:

>801_bases
TTGCGAACGCGGTATCGCAAGGTGTTCCGCGACGTCTACATCGCGAAGGACGCCGAGCTGACGCCGGCCGGCAAAGCGCG
CGCGGCGTGGCTGTCGACCGGTGCGACACTGGCCGGTTTGTCCGCCGCGGCGATCCATGGCACCAAGTGGCTCGATGCGG
CCGCGCCCGCCGAAATCGTGCGGGCGGATCGGCACGGTCAGCGCGGCATCCTCGTGCGCAGCTACACGCTGGCCGATGAC
GAGGCGGACAGCGTGTCCGGAATGCGGGTGACGACCGCCGCCCGGACGGCGTTCGACATCGGTTGCGGCCTGCCCGCCGC
CAAGGCGCTGCCGATCCTCGACGCGTTACTCAACGCGACGGGTATCAAGCCCGCCGACGTCGTCGCTGTGGCCGACCGGC
ACCGGGGCGCCCGCGGCATTCGCCGGCTGCGCGCCTCGCTGGAGCTGGCCGACGGCGGTGCGGAGTCTCCGCAGGAGACC
AGGTTGCGGGTGCTGCTGGTGCGGGCCGGACTGCCGAAGCCGCAGACGCAGATCGAGCTGCGAGAGCTGCGCGTTCGGGT
GGACATGGGGTGGCGGGAGTGGAAGGTCGCCGTCGAGTACGACGGGATCCAGCACTGGGACGATCCCTATCAGCGGGCCT
GGGACATCGAGCGAATCGCGTTGCTCGAGGCGGCCGGCTGGGCCGTGATCAGAGTCAGCGCGGCGATGTTGTCGCGGCCG
CAGGTGATCGTCGAGCGCGTCACGGCCAAGCTCGCCGAGCGTGGGGCCTACGGTCGACCGCGAGCGAGTTCCCGTGCCTA
A

Upstream 100 bases:

>100_bases
TCGGCGCACCCGCCGCGCGTGTGCGACGGCGAATATGCCGGCATGCCCCCGTTTCTGGGCAGTGACGCCCTGCACCGCGG
CGCGGTGACCCGCAGTCAAC

Downstream 100 bases:

>100_bases
GGCCCACGCTCGGCGCCCGTAGGGTCGAGCGTTATCCCGTTGTGGTGCAACGTGATTGCTCATAGCGGCGACGCGGGTCA
CTCCAAGACGCTTGCCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MRTRYRKVFRDVYIAKDAELTPAGKARAAWLSTGATLAGLSAAAIHGTKWLDAAAPAEIVRADRHGQRGILVRSYTLADD
EADSVSGMRVTTAARTAFDIGCGLPAAKALPILDALLNATGIKPADVVAVADRHRGARGIRRLRASLELADGGAESPQET
RLRVLLVRAGLPKPQTQIELRELRVRVDMGWREWKVAVEYDGIQHWDDPYQRAWDIERIALLEAAGWAVIRVSAAMLSRP
QVIVERVTAKLAERGAYGRPRASSRA

Sequences:

>Translated_266_residues
MRTRYRKVFRDVYIAKDAELTPAGKARAAWLSTGATLAGLSAAAIHGTKWLDAAAPAEIVRADRHGQRGILVRSYTLADD
EADSVSGMRVTTAARTAFDIGCGLPAAKALPILDALLNATGIKPADVVAVADRHRGARGIRRLRASLELADGGAESPQET
RLRVLLVRAGLPKPQTQIELRELRVRVDMGWREWKVAVEYDGIQHWDDPYQRAWDIERIALLEAAGWAVIRVSAAMLSRP
QVIVERVTAKLAERGAYGRPRASSRA
>Mature_266_residues
MRTRYRKVFRDVYIAKDAELTPAGKARAAWLSTGATLAGLSAAAIHGTKWLDAAAPAEIVRADRHGQRGILVRSYTLADD
EADSVSGMRVTTAARTAFDIGCGLPAAKALPILDALLNATGIKPADVVAVADRHRGARGIRRLRASLELADGGAESPQET
RLRVLLVRAGLPKPQTQIELRELRVRVDMGWREWKVAVEYDGIQHWDDPYQRAWDIERIALLEAAGWAVIRVSAAMLSRP
QVIVERVTAKLAERGAYGRPRASSRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011335 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29073; Mature: 29073

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRYRKVFRDVYIAKDAELTPAGKARAAWLSTGATLAGLSAAAIHGTKWLDAAAPAEIV
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHCCHHHHHCCCHHHCCCCCHHHH
RADRHGQRGILVRSYTLADDEADSVSGMRVTTAARTAFDIGCGLPAAKALPILDALLNAT
HHCCCCCCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
GIKPADVVAVADRHRGARGIRRLRASLELADGGAESPQETRLRVLLVRAGLPKPQTQIEL
CCCHHHEEEEHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEECCCCCCHHHHHH
RELRVRVDMGWREWKVAVEYDGIQHWDDPYQRAWDIERIALLEAAGWAVIRVSAAMLSRP
HHEEEEEECCHHHEEEEEEECCCCCCCCHHHHHHCHHHHHHHHHCCCHHEEHHHHHHCCH
QVIVERVTAKLAERGAYGRPRASSRA
HHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRTRYRKVFRDVYIAKDAELTPAGKARAAWLSTGATLAGLSAAAIHGTKWLDAAAPAEIV
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHCCHHHHHCCCHHHCCCCCHHHH
RADRHGQRGILVRSYTLADDEADSVSGMRVTTAARTAFDIGCGLPAAKALPILDALLNAT
HHCCCCCCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
GIKPADVVAVADRHRGARGIRRLRASLELADGGAESPQETRLRVLLVRAGLPKPQTQIEL
CCCHHHEEEEHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEECCCCCCHHHHHH
RELRVRVDMGWREWKVAVEYDGIQHWDDPYQRAWDIERIALLEAAGWAVIRVSAAMLSRP
HHEEEEEECCHHHEEEEEEECCCCCCCCHHHHHHCHHHHHHHHHCCCHHEEHHHHHHCCH
QVIVERVTAKLAERGAYGRPRASSRA
HHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]