| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410035
Identifier: 41410035
GI number: 41410035
Start: 4397786
End: 4398586
Strand: Direct
Name: 41410035
Synonym: MAP3937
Alternate gene names: NA
Gene position: 4397786-4398586 (Clockwise)
Preceding gene: 41410034
Following gene: 41410039
Centisome position: 91.06
GC content: 70.79
Gene sequence:
>801_bases TTGCGAACGCGGTATCGCAAGGTGTTCCGCGACGTCTACATCGCGAAGGACGCCGAGCTGACGCCGGCCGGCAAAGCGCG CGCGGCGTGGCTGTCGACCGGTGCGACACTGGCCGGTTTGTCCGCCGCGGCGATCCATGGCACCAAGTGGCTCGATGCGG CCGCGCCCGCCGAAATCGTGCGGGCGGATCGGCACGGTCAGCGCGGCATCCTCGTGCGCAGCTACACGCTGGCCGATGAC GAGGCGGACAGCGTGTCCGGAATGCGGGTGACGACCGCCGCCCGGACGGCGTTCGACATCGGTTGCGGCCTGCCCGCCGC CAAGGCGCTGCCGATCCTCGACGCGTTACTCAACGCGACGGGTATCAAGCCCGCCGACGTCGTCGCTGTGGCCGACCGGC ACCGGGGCGCCCGCGGCATTCGCCGGCTGCGCGCCTCGCTGGAGCTGGCCGACGGCGGTGCGGAGTCTCCGCAGGAGACC AGGTTGCGGGTGCTGCTGGTGCGGGCCGGACTGCCGAAGCCGCAGACGCAGATCGAGCTGCGAGAGCTGCGCGTTCGGGT GGACATGGGGTGGCGGGAGTGGAAGGTCGCCGTCGAGTACGACGGGATCCAGCACTGGGACGATCCCTATCAGCGGGCCT GGGACATCGAGCGAATCGCGTTGCTCGAGGCGGCCGGCTGGGCCGTGATCAGAGTCAGCGCGGCGATGTTGTCGCGGCCG CAGGTGATCGTCGAGCGCGTCACGGCCAAGCTCGCCGAGCGTGGGGCCTACGGTCGACCGCGAGCGAGTTCCCGTGCCTA A
Upstream 100 bases:
>100_bases TCGGCGCACCCGCCGCGCGTGTGCGACGGCGAATATGCCGGCATGCCCCCGTTTCTGGGCAGTGACGCCCTGCACCGCGG CGCGGTGACCCGCAGTCAAC
Downstream 100 bases:
>100_bases GGCCCACGCTCGGCGCCCGTAGGGTCGAGCGTTATCCCGTTGTGGTGCAACGTGATTGCTCATAGCGGCGACGCGGGTCA CTCCAAGACGCTTGCCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MRTRYRKVFRDVYIAKDAELTPAGKARAAWLSTGATLAGLSAAAIHGTKWLDAAAPAEIVRADRHGQRGILVRSYTLADD EADSVSGMRVTTAARTAFDIGCGLPAAKALPILDALLNATGIKPADVVAVADRHRGARGIRRLRASLELADGGAESPQET RLRVLLVRAGLPKPQTQIELRELRVRVDMGWREWKVAVEYDGIQHWDDPYQRAWDIERIALLEAAGWAVIRVSAAMLSRP QVIVERVTAKLAERGAYGRPRASSRA
Sequences:
>Translated_266_residues MRTRYRKVFRDVYIAKDAELTPAGKARAAWLSTGATLAGLSAAAIHGTKWLDAAAPAEIVRADRHGQRGILVRSYTLADD EADSVSGMRVTTAARTAFDIGCGLPAAKALPILDALLNATGIKPADVVAVADRHRGARGIRRLRASLELADGGAESPQET RLRVLLVRAGLPKPQTQIELRELRVRVDMGWREWKVAVEYDGIQHWDDPYQRAWDIERIALLEAAGWAVIRVSAAMLSRP QVIVERVTAKLAERGAYGRPRASSRA >Mature_266_residues MRTRYRKVFRDVYIAKDAELTPAGKARAAWLSTGATLAGLSAAAIHGTKWLDAAAPAEIVRADRHGQRGILVRSYTLADD EADSVSGMRVTTAARTAFDIGCGLPAAKALPILDALLNATGIKPADVVAVADRHRGARGIRRLRASLELADGGAESPQET RLRVLLVRAGLPKPQTQIELRELRVRVDMGWREWKVAVEYDGIQHWDDPYQRAWDIERIALLEAAGWAVIRVSAAMLSRP QVIVERVTAKLAERGAYGRPRASSRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29073; Mature: 29073
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRYRKVFRDVYIAKDAELTPAGKARAAWLSTGATLAGLSAAAIHGTKWLDAAAPAEIV CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHCCHHHHHCCCHHHCCCCCHHHH RADRHGQRGILVRSYTLADDEADSVSGMRVTTAARTAFDIGCGLPAAKALPILDALLNAT HHCCCCCCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHC GIKPADVVAVADRHRGARGIRRLRASLELADGGAESPQETRLRVLLVRAGLPKPQTQIEL CCCHHHEEEEHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEECCCCCCHHHHHH RELRVRVDMGWREWKVAVEYDGIQHWDDPYQRAWDIERIALLEAAGWAVIRVSAAMLSRP HHEEEEEECCHHHEEEEEEECCCCCCCCHHHHHHCHHHHHHHHHCCCHHEEHHHHHHCCH QVIVERVTAKLAERGAYGRPRASSRA HHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRTRYRKVFRDVYIAKDAELTPAGKARAAWLSTGATLAGLSAAAIHGTKWLDAAAPAEIV CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHCCHHHHHCCCHHHCCCCCHHHH RADRHGQRGILVRSYTLADDEADSVSGMRVTTAARTAFDIGCGLPAAKALPILDALLNAT HHCCCCCCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHC GIKPADVVAVADRHRGARGIRRLRASLELADGGAESPQETRLRVLLVRAGLPKPQTQIEL CCCHHHEEEEHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEECCCCCCHHHHHH RELRVRVDMGWREWKVAVEYDGIQHWDDPYQRAWDIERIALLEAAGWAVIRVSAAMLSRP HHEEEEEECCHHHEEEEEEECCCCCCCCHHHHHHCHHHHHHHHHCCCHHEEHHHHHHCCH QVIVERVTAKLAERGAYGRPRASSRA HHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]