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The map label for this gene is ycgR [H]

Identifier: 41409864

GI number: 41409864

Start: 4210909

End: 4211901

Strand: Direct

Name: ycgR [H]

Synonym: MAP3766

Alternate gene names: 41409864

Gene position: 4210909-4211901 (Clockwise)

Preceding gene: 41409863

Following gene: 41409868

Centisome position: 87.19

GC content: 66.26

Gene sequence:

>993_bases
GTGCCGGTGGCGACTCTGAAGCCCGGGCGCAGGCCCGGGTCGATGGAACTGCTGGTGGGCATCCTGTTGGCCTGCGCTTT
GGCAGCGACAACCCTGCGCAATGCGGTCATCAACAGTGCGGCATTGTCGACGGTGGGCACCGTGTTCTGCGGCGTTTTCG
TGCAGGCGATTCCGTTCCTGGTGCTTGGCGTGGTGGTCAGCGGACTGATCGCGGTATTCGTGTCGCCGGAGCGGTTGGCG
CGCTGGTTGCCACGTCGCGCGTCCATGGCCGTACTGGCCGCCGGCATTGGCGGGGCGGCGCTGCCGGGCTGCGAGTGCGG
TTCAGTTCCGTTGGCGCGGCGCCTGTTTGGGGAAGGCGCTGCGACTGGAGCCGCGGCGTTGACGTTCATGCTGGCCGCGC
CGGCGATCAACCCGGTCGTCCTGGTGGCGACCGCGGTGGCGTTTCCGGGAGCGCCGAGAATGGTTTTCGCCCGAATGATA
GCGTCGTTGCTGACCGCGGTTGTGATGGGCTGGGTATGGTCGCGCTGGGGCCGTGCGGAATGGATCACCCGCCGTCTGCC
CGCTGCGGGGACTGCAACCGAATCGCGATGGACGACCTTCACCGAAGCAGCCCGCCACGATTTCTTGCAAGCCGCATCGT
ATTTGGTGTTGGGTGCCATCGCCGCGGCCCTGCTTCATGTGATGGTGCCCCAGTGGGCGTTCGCGCATCTGGCCGACAAT
CCGGTCCTGGCGGTCGCGCTGATGGCCGCTTTGGCCGTGGTGCTGGCGTTGTGTTCGGAGGCGGACGCGTTCGTCGCAGC
CAGCATGACGATGGTGCCTTTGCTCCCAAGGCTGGTGTTTCTTGTTGTCGGTCCCGCCGTCGATGTGAAGTTGTTCGCCA
TGCAGGCGGGCATGTTCGGCCGGGCGTTCGCGGCACGCTTTGCGCCGTGCACCTTCGCGGTGGCAACGGCAAGTGCCGGT
GCGATCGGACTATTCGTATTGGGCCCTGGTTGA

Upstream 100 bases:

>100_bases
TGATGCCGGGTACGTGGGACCCGGTCGGTGACGGCGAGCGCAGGGAACAGGGCGACGGCCGCGACCACTAACACCTGGAA
TCTGTGCGCGCTGAAATAAT

Downstream 100 bases:

>100_bases
TGAGCCGGGAAGCCGAAAACACGGTGTTGCTGTTGGTGGGCATCAGCATCATGATGATCACCGTGTCGGGCATGTTCACC
CGCTACGTCAAGCCCGGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MPVATLKPGRRPGSMELLVGILLACALAATTLRNAVINSAALSTVGTVFCGVFVQAIPFLVLGVVVSGLIAVFVSPERLA
RWLPRRASMAVLAAGIGGAALPGCECGSVPLARRLFGEGAATGAAALTFMLAAPAINPVVLVATAVAFPGAPRMVFARMI
ASLLTAVVMGWVWSRWGRAEWITRRLPAAGTATESRWTTFTEAARHDFLQAASYLVLGAIAAALLHVMVPQWAFAHLADN
PVLAVALMAALAVVLALCSEADAFVAASMTMVPLLPRLVFLVVGPAVDVKLFAMQAGMFGRAFAARFAPCTFAVATASAG
AIGLFVLGPG

Sequences:

>Translated_330_residues
MPVATLKPGRRPGSMELLVGILLACALAATTLRNAVINSAALSTVGTVFCGVFVQAIPFLVLGVVVSGLIAVFVSPERLA
RWLPRRASMAVLAAGIGGAALPGCECGSVPLARRLFGEGAATGAAALTFMLAAPAINPVVLVATAVAFPGAPRMVFARMI
ASLLTAVVMGWVWSRWGRAEWITRRLPAAGTATESRWTTFTEAARHDFLQAASYLVLGAIAAALLHVMVPQWAFAHLADN
PVLAVALMAALAVVLALCSEADAFVAASMTMVPLLPRLVFLVVGPAVDVKLFAMQAGMFGRAFAARFAPCTFAVATASAG
AIGLFVLGPG
>Mature_329_residues
PVATLKPGRRPGSMELLVGILLACALAATTLRNAVINSAALSTVGTVFCGVFVQAIPFLVLGVVVSGLIAVFVSPERLAR
WLPRRASMAVLAAGIGGAALPGCECGSVPLARRLFGEGAATGAAALTFMLAAPAINPVVLVATAVAFPGAPRMVFARMIA
SLLTAVVMGWVWSRWGRAEWITRRLPAAGTATESRWTTFTEAARHDFLQAASYLVLGAIAAALLHVMVPQWAFAHLADNP
VLAVALMAALAVVLALCSEADAFVAASMTMVPLLPRLVFLVVGPAVDVKLFAMQAGMFGRAFAARFAPCTFAVATASAGA
IGLFVLGPG

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 33994; Mature: 33863

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVATLKPGRRPGSMELLVGILLACALAATTLRNAVINSAALSTVGTVFCGVFVQAIPFL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGVVVSGLIAVFVSPERLARWLPRRASMAVLAAGIGGAALPGCECGSVPLARRLFGEGA
HHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCC
ATGAAALTFMLAAPAINPVVLVATAVAFPGAPRMVFARMIASLLTAVVMGWVWSRWGRAE
CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
WITRRLPAAGTATESRWTTFTEAARHDFLQAASYLVLGAIAAALLHVMVPQWAFAHLADN
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVLAVALMAALAVVLALCSEADAFVAASMTMVPLLPRLVFLVVGPAVDVKLFAMQAGMFG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHH
RAFAARFAPCTFAVATASAGAIGLFVLGPG
HHHHHHHCCHHHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure 
PVATLKPGRRPGSMELLVGILLACALAATTLRNAVINSAALSTVGTVFCGVFVQAIPFL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGVVVSGLIAVFVSPERLARWLPRRASMAVLAAGIGGAALPGCECGSVPLARRLFGEGA
HHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCC
ATGAAALTFMLAAPAINPVVLVATAVAFPGAPRMVFARMIASLLTAVVMGWVWSRWGRAE
CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
WITRRLPAAGTATESRWTTFTEAARHDFLQAASYLVLGAIAAALLHVMVPQWAFAHLADN
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVLAVALMAALAVVLALCSEADAFVAASMTMVPLLPRLVFLVVGPAVDVKLFAMQAGMFG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHH
RAFAARFAPCTFAVATASAGAIGLFVLGPG
HHHHHHHCCHHHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]