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The map label for this gene is 41409853

Identifier: 41409853

GI number: 41409853

Start: 4193328

End: 4193777

Strand: Direct

Name: 41409853

Synonym: MAP3755

Alternate gene names: NA

Gene position: 4193328-4193777 (Clockwise)

Preceding gene: 41409852

Following gene: 41409863

Centisome position: 86.82

GC content: 61.56

Gene sequence:

>450_bases
GTGGACTTCCAATTCGACGTCAGTATCGATGGCCGGCCAATCAAGATCGTCTCAATCGTCGACGAGCACACCCGCGAATG
CCTCGCGGGAATGGTCGAGCGCAGCATCACCGGTGAGCATCTGATTGCCGAGCTGGACCAGCTGGCCGTTCAGCACGGCA
CCTATCCCGGGTGCTGCGGTGCAACAATGCCCCCTGAATTAGCGTGCAGCGCAATAGCTGGCTGGGCCAGCGGCCAAATT
GGCCCGGGTAGCCATCAGCGACTGGAAACACGACTACAACCACCACCGCCGACACTCGGTCCTGGGCATTGGTGTGGCAT
GGCGCGGGATCCGATAATTCTCGATCAGGCAACGCCGCCCGGACGCCAGCCGAGTTGCAACAAGAGGCCTAGGTCGTCGC
GGATGGCGCGGTGGTGGGTGATTTGGCCGTCGGTGATGGTGAAGATGTGA

Upstream 100 bases:

>100_bases
GTTGGCGCGATGAAGGCCTGCGTGTGCCACAGCGACGACGCACGGCATATCAACAGCGCTACCCACGGTCGTCGCGGATG
CGCCCGACCAGGCGTGAGCG

Downstream 100 bases:

>100_bases
ACTTGTTTGTGTTCGATGTGTTTGCCGGTAGGTTGGATGCCGTTGAAAATACCGGTATGTTCGCCGGTCATCGTGCTCAC
CGCGATGACCGTGTTGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Transposase B; Transposase Of

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MDFQFDVSIDGRPIKIVSIVDEHTRECLAGMVERSITGEHLIAELDQLAVQHGTYPGCCGATMPPELACSAIAGWASGQI
GPGSHQRLETRLQPPPPTLGPGHWCGMARDPIILDQATPPGRQPSCNKRPRSSRMARWWVIWPSVMVKM

Sequences:

>Translated_149_residues
MDFQFDVSIDGRPIKIVSIVDEHTRECLAGMVERSITGEHLIAELDQLAVQHGTYPGCCGATMPPELACSAIAGWASGQI
GPGSHQRLETRLQPPPPTLGPGHWCGMARDPIILDQATPPGRQPSCNKRPRSSRMARWWVIWPSVMVKM
>Mature_149_residues
MDFQFDVSIDGRPIKIVSIVDEHTRECLAGMVERSITGEHLIAELDQLAVQHGTYPGCCGATMPPELACSAIAGWASGQI
GPGSHQRLETRLQPPPPTLGPGHWCGMARDPIILDQATPPGRQPSCNKRPRSSRMARWWVIWPSVMVKM

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16350; Mature: 16350

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFQFDVSIDGRPIKIVSIVDEHTRECLAGMVERSITGEHLIAELDQLAVQHGTYPGCCG
CCEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
ATMPPELACSAIAGWASGQIGPGSHQRLETRLQPPPPTLGPGHWCGMARDPIILDQATPP
CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
GRQPSCNKRPRSSRMARWWVIWPSVMVKM
CCCCCCCCCCCCCCCEEEEEECHHHHHCC
>Mature Secondary Structure
MDFQFDVSIDGRPIKIVSIVDEHTRECLAGMVERSITGEHLIAELDQLAVQHGTYPGCCG
CCEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
ATMPPELACSAIAGWASGQIGPGSHQRLETRLQPPPPTLGPGHWCGMARDPIILDQATPP
CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
GRQPSCNKRPRSSRMARWWVIWPSVMVKM
CCCCCCCCCCCCCCCEEEEEECHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA