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The map label for this gene is clcB [H]

Identifier: 41409788

GI number: 41409788

Start: 4103837

End: 4105099

Strand: Direct

Name: clcB [H]

Synonym: MAP3690

Alternate gene names: 41409788

Gene position: 4103837-4105099 (Clockwise)

Preceding gene: 41409787

Following gene: 41409791

Centisome position: 84.97

GC content: 73.16

Gene sequence:

>1263_bases
GTGGCCCGAATGCCCGCACCCCGCTCGGACCGCAACGCCCTCGACTTCTTCTGCGCGGTCATCATCGTCGGTGTGCTCGC
CGGAATCGCCGGCGTGGCAACCACATTGGTGCTGCGCGTGGTCCAGCACGCCACCTACCACTACAGTTTCGGCGCGCTGC
TGGCCGGGGTGGCCGCCAGCAGCCCGATCCGGCGGGTGCTGGGCCCGATGGTCGGCGCGGCGCTGGCCGGGCTGGGGTGG
TGGCTGCTGCGGCGGCGCACCGACGTGCCGCCGCTGGCCGAAACGATCGCGCGCTCCGAGCGCGTCCCGCGGCTCGCCTG
GAGCATCGACGCCGTGCTGCAGGTGCTGCTGGTCGGATCCGGGGCATCGCTGGGGCGGGAGGGCGCCCCGCGCCAATTCG
CTTCAGCACTCGGCGATTTCGGTATCGGATGGCTCAGACGCCTGTCGTCGCGCGACCGGGAGATCCTGCTGGCCTGCGCG
GCGGGGGCCGGTCTGGGCGCGGTGTATGCGGTGCCGCTGGCCGGTGCGCTGTTCGCGGTCCGGATCCTGCTGCGCACCTG
GCGGCTGCGGGCGGTGGGCGCGGCGTTCCTGTCCTCCGGGGTGGCGGTGGCCGTCGGCTCGGCCGTCACCGGCGACCAGC
CCAACCTGCGATGGCCGGTCGAAGAGTCCACCTACCTGTTGACCGCGCACGGGCTGTTGCTGGCGCCGGTGGCGCTCGCG
GTGGGATTGGTCTTCAACCGGTTGATGGCCGTCGCCCGGCCGGCCCGCCCGATGCGGACCTGGACGCTGATCCCGGCGCT
GGCCGGCGCCGGCCTGGTGACGGGCGTCTGCTCGCATTGGTGGCCCGAATTGCCCGGCAACGGCCGCAGCATCCTGACGG
TCAGCCTGGCCAGCGGCATGACCTTGGCGTCGGCCCTGGCGATCCTGCTGCTCAAACCCGTTCTGACCGCGTTGTTTTTG
CGCGCCGGCGGCGCGGGCGGCCTGTTGACGCCGTCGCTGGCCACCGGGGCGGCCGCCGGGGCGGCGCTGGTGCTGACGAT
CAATTGGGCGACCGCGAGCCAGCTGCACGTGCCCGCGGTGTCGCTGGCCGGCGCCGCCGGGGTGCTGGCCGTCACCCAGG
GCTCACCGATCTGGGCGGCGATCTTCGTCTGGGAGCTGGCCCGGCCACCGCTGTGGCTGTTCCTGCTTTTCCTGCTGACC
GCGACCGCCGCGCACGGGCTGAAAGTGCTTGCCCAGGGCCGTACTACGACGCACGCCGGCTGA

Upstream 100 bases:

>100_bases
TGGTACGGGCTCAAGGGTTCACCCGAGGAGCGGGAAGCCGCCGCGGCCCAGCCCGAGGCGGACCGCTCCGGCGCCGGCGG
CTAGGGCTACCGTCGTCGAG

Downstream 100 bases:

>100_bases
CCTACAGCGCCCGGACGGTTCCGGTCAGGTGCGGGTAGCCCTTGGCGATGTTGCGTAGCGCGATGTCCCAGCCGCCGTCG
TGTTCGTCGATGTAGAGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MARMPAPRSDRNALDFFCAVIIVGVLAGIAGVATTLVLRVVQHATYHYSFGALLAGVAASSPIRRVLGPMVGAALAGLGW
WLLRRRTDVPPLAETIARSERVPRLAWSIDAVLQVLLVGSGASLGREGAPRQFASALGDFGIGWLRRLSSRDREILLACA
AGAGLGAVYAVPLAGALFAVRILLRTWRLRAVGAAFLSSGVAVAVGSAVTGDQPNLRWPVEESTYLLTAHGLLLAPVALA
VGLVFNRLMAVARPARPMRTWTLIPALAGAGLVTGVCSHWWPELPGNGRSILTVSLASGMTLASALAILLLKPVLTALFL
RAGGAGGLLTPSLATGAAAGAALVLTINWATASQLHVPAVSLAGAAGVLAVTQGSPIWAAIFVWELARPPLWLFLLFLLT
ATAAHGLKVLAQGRTTTHAG

Sequences:

>Translated_420_residues
MARMPAPRSDRNALDFFCAVIIVGVLAGIAGVATTLVLRVVQHATYHYSFGALLAGVAASSPIRRVLGPMVGAALAGLGW
WLLRRRTDVPPLAETIARSERVPRLAWSIDAVLQVLLVGSGASLGREGAPRQFASALGDFGIGWLRRLSSRDREILLACA
AGAGLGAVYAVPLAGALFAVRILLRTWRLRAVGAAFLSSGVAVAVGSAVTGDQPNLRWPVEESTYLLTAHGLLLAPVALA
VGLVFNRLMAVARPARPMRTWTLIPALAGAGLVTGVCSHWWPELPGNGRSILTVSLASGMTLASALAILLLKPVLTALFL
RAGGAGGLLTPSLATGAAAGAALVLTINWATASQLHVPAVSLAGAAGVLAVTQGSPIWAAIFVWELARPPLWLFLLFLLT
ATAAHGLKVLAQGRTTTHAG
>Mature_419_residues
ARMPAPRSDRNALDFFCAVIIVGVLAGIAGVATTLVLRVVQHATYHYSFGALLAGVAASSPIRRVLGPMVGAALAGLGWW
LLRRRTDVPPLAETIARSERVPRLAWSIDAVLQVLLVGSGASLGREGAPRQFASALGDFGIGWLRRLSSRDREILLACAA
GAGLGAVYAVPLAGALFAVRILLRTWRLRAVGAAFLSSGVAVAVGSAVTGDQPNLRWPVEESTYLLTAHGLLLAPVALAV
GLVFNRLMAVARPARPMRTWTLIPALAGAGLVTGVCSHWWPELPGNGRSILTVSLASGMTLASALAILLLKPVLTALFLR
AGGAGGLLTPSLATGAAAGAALVLTINWATASQLHVPAVSLAGAAGVLAVTQGSPIWAAIFVWELARPPLWLFLLFLLTA
TAAHGLKVLAQGRTTTHAG

Specific function: Probably acts as an electrical shunt for an outwardly- directed proton pump that is linked to amino acid decarboxylation, as part of the extreme acid resistance (XAR) response [H]

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 43454; Mature: 43323

Theoretical pI: Translated: 12.05; Mature: 12.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARMPAPRSDRNALDFFCAVIIVGVLAGIAGVATTLVLRVVQHATYHYSFGALLAGVAAS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPIRRVLGPMVGAALAGLGWWLLRRRTDVPPLAETIARSERVPRLAWSIDAVLQVLLVGS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
GASLGREGAPRQFASALGDFGIGWLRRLSSRDREILLACAAGAGLGAVYAVPLAGALFAV
CCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
RILLRTWRLRAVGAAFLSSGVAVAVGSAVTGDQPNLRWPVEESTYLLTAHGLLLAPVALA
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHH
VGLVFNRLMAVARPARPMRTWTLIPALAGAGLVTGVCSHWWPELPGNGRSILTVSLASGM
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHCCH
TLASALAILLLKPVLTALFLRAGGAGGLLTPSLATGAAAGAALVLTINWATASQLHVPAV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEEEEECCCCCCCCCHH
SLAGAAGVLAVTQGSPIWAAIFVWELARPPLWLFLLFLLTATAAHGLKVLAQGRTTTHAG
HHCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ARMPAPRSDRNALDFFCAVIIVGVLAGIAGVATTLVLRVVQHATYHYSFGALLAGVAAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPIRRVLGPMVGAALAGLGWWLLRRRTDVPPLAETIARSERVPRLAWSIDAVLQVLLVGS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
GASLGREGAPRQFASALGDFGIGWLRRLSSRDREILLACAAGAGLGAVYAVPLAGALFAV
CCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
RILLRTWRLRAVGAAFLSSGVAVAVGSAVTGDQPNLRWPVEESTYLLTAHGLLLAPVALA
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHH
VGLVFNRLMAVARPARPMRTWTLIPALAGAGLVTGVCSHWWPELPGNGRSILTVSLASGM
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHCCH
TLASALAILLLKPVLTALFLRAGGAGGLLTPSLATGAAAGAALVLTINWATASQLHVPAV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEEEEECCCCCCCCCHH
SLAGAAGVLAVTQGSPIWAAIFVWELARPPLWLFLLFLLTATAAHGLKVLAQGRTTTHAG
HHCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA