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The map label for this gene is 41409759

Identifier: 41409759

GI number: 41409759

Start: 4066318

End: 4067103

Strand: Reverse

Name: 41409759

Synonym: MAP3661c

Alternate gene names: NA

Gene position: 4067103-4066318 (Counterclockwise)

Preceding gene: 41409760

Following gene: 41409753

Centisome position: 84.21

GC content: 71.25

Gene sequence:

>786_bases
TTGAGCTCAACGTCGCGGGCTACCAATTCACCCGCGAGATGCCCGACTTGCGGCGCCGCACCTTCCGCTTCAGCCCACGT
CACATGCACTGGCCGGCACTGCGGCATTCGCACGCGGCCTGACGCCGGCCCGGGACTCACTGACCGTGCCGACCACCAAG
CAGCAGGCCCCGCCAAGCGCGGGGGCACCCGGACCAAGATGCTGGCCAGCGCCGCCGAGGTGATGCGCGAGCGCGGCGCC
GCCGGCGTGACCATCGATGCGGTGCTGGCCCGCAGCGGCGCACCGCGCGGCTCGGTCTACTACCACTTCCCCGACGGACG
CAACCAGATCCTGGCCGAGGCGCTGCGCTATTCGGGTGACTCGATCACCGCCCTCATCGACCAGGCGGCCGGCCGCGGCG
GCCGGGCGCTGCTGCGCGAGTTCGTCGAATACTGGGAGCGGCTGCTGACCGAGGGCGGCTTCACCGCCGGCTGTCCGGTC
GTGGCCGCGGCGATCGGCTGCTCGGAGGACGAGGGCCCCAAGCTGTCCGCCGAGGCCGGCGCCATCCTGGGCCGCTGGTG
CACCGCGCTCACCCGCGCCTTCGTCAACGACGGCTTCGACGACGCCGACGCCGCGTCGCTGGCCGTGATGTCGATCGCCG
CGCTGGAGGGCGGCATCGTGCTGTCCCGCTCGACCCGCAACGCCGGCCCGCTACATCAGGTCGGCGAGCAACTCGAATTC
CTGATAAAGGCAAGGGAATTCGTCGTCCGCAACAAGATCCCGGGCAAGCAACCCGGCTCGCGGTGA

Upstream 100 bases:

>100_bases
CATTGCGCCTGAGAAATTGCTTAATTTACGGGCGTCTTATATGGTTCTTAGCATAATCAAGGGCTGCACACAGGCCGGGA
GATACCAATCATGTGGATCA

Downstream 100 bases:

>100_bases
CTCAGTCGCTGGCCGGTAGCGGCTTGACCTCTTTGAGCTGCAGCGGAGTCTGGCCGATGCTCAGGCTTCCCGCGCCCGGC
TTGGTCACCAGCACCTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSSTSRATNSPARCPTCGAAPSASAHVTCTGRHCGIRTRPDAGPGLTDRADHQAAGPAKRGGTRTKMLASAAEVMRERGA
AGVTIDAVLARSGAPRGSVYYHFPDGRNQILAEALRYSGDSITALIDQAAGRGGRALLREFVEYWERLLTEGGFTAGCPV
VAAAIGCSEDEGPKLSAEAGAILGRWCTALTRAFVNDGFDDADAASLAVMSIAALEGGIVLSRSTRNAGPLHQVGEQLEF
LIKAREFVVRNKIPGKQPGSR

Sequences:

>Translated_261_residues
MSSTSRATNSPARCPTCGAAPSASAHVTCTGRHCGIRTRPDAGPGLTDRADHQAAGPAKRGGTRTKMLASAAEVMRERGA
AGVTIDAVLARSGAPRGSVYYHFPDGRNQILAEALRYSGDSITALIDQAAGRGGRALLREFVEYWERLLTEGGFTAGCPV
VAAAIGCSEDEGPKLSAEAGAILGRWCTALTRAFVNDGFDDADAASLAVMSIAALEGGIVLSRSTRNAGPLHQVGEQLEF
LIKAREFVVRNKIPGKQPGSR
>Mature_260_residues
SSTSRATNSPARCPTCGAAPSASAHVTCTGRHCGIRTRPDAGPGLTDRADHQAAGPAKRGGTRTKMLASAAEVMRERGAA
GVTIDAVLARSGAPRGSVYYHFPDGRNQILAEALRYSGDSITALIDQAAGRGGRALLREFVEYWERLLTEGGFTAGCPVV
AAAIGCSEDEGPKLSAEAGAILGRWCTALTRAFVNDGFDDADAASLAVMSIAALEGGIVLSRSTRNAGPLHQVGEQLEFL
IKAREFVVRNKIPGKQPGSR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 27192; Mature: 27061

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTSRATNSPARCPTCGAAPSASAHVTCTGRHCGIRTRPDAGPGLTDRADHQAAGPAKR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGTRTKMLASAAEVMRERGAAGVTIDAVLARSGAPRGSVYYHFPDGRNQILAEALRYSGD
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCC
SITALIDQAAGRGGRALLREFVEYWERLLTEGGFTAGCPVVAAAIGCSEDEGPKLSAEAG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHH
AILGRWCTALTRAFVNDGFDDADAASLAVMSIAALEGGIVLSRSTRNAGPLHQVGEQLEF
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHH
LIKAREFVVRNKIPGKQPGSR
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SSTSRATNSPARCPTCGAAPSASAHVTCTGRHCGIRTRPDAGPGLTDRADHQAAGPAKR
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGTRTKMLASAAEVMRERGAAGVTIDAVLARSGAPRGSVYYHFPDGRNQILAEALRYSGD
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCC
SITALIDQAAGRGGRALLREFVEYWERLLTEGGFTAGCPVVAAAIGCSEDEGPKLSAEAG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHH
AILGRWCTALTRAFVNDGFDDADAASLAVMSIAALEGGIVLSRSTRNAGPLHQVGEQLEF
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHH
LIKAREFVVRNKIPGKQPGSR
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]