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The map label for this gene is fadE3_2

Identifier: 41409749

GI number: 41409749

Start: 4054770

End: 4055987

Strand: Reverse

Name: fadE3_2

Synonym: MAP3651c

Alternate gene names: 41409749

Gene position: 4055987-4054770 (Counterclockwise)

Preceding gene: 41409753

Following gene: 41409746

Centisome position: 83.98

GC content: 67.24

Gene sequence:

>1218_bases
GTGGGCGCCAATTCGCGGGTTTTCGCCCAGCAAGTCGACGTTCGGCGCGAATCGGTGAGGTGGGCACAGGTGAATGACGA
AGAGGACATGCTGGTCGCCACGGTGCGGGCGTTCATCGACCGCGAGGTCAAACCGACCGTGCGCGAGGTGGAGCACGCCG
ATGCCTATCCCGAGGCGTGGATCGAGCAGATGAAGCGGATCGGGATCTACGGGCTGGCGGTGCCCGAGGAATACGGTGGT
TCGCCGGTGTCCATGCCGTGCTACGTGCGGGTCACCGAGCAGCTGGCGCGCGGCTGGATGAGCCTGGCCGGGGCGATGGG
CGGGCACACCGTGGTGGCCAAGCTGCTAACGCTGTTCGGCACCGAGGACCAGAAGCGGGCCTACCTGCCGCGGATGGCCA
GCGGCGAAATCCGGGCCACCATGGCGTTGACCGAGCCCGGCGGCGGCTCGGACCTGCAGAACATGTCGACCACCGCGCTG
CCCGACCCCGACTCCGACGGCCTGGTGGTCAACGGGGCCAAGACCTGGATCAGCAACGCCCGCCGTTCCGGTCTGATCGC
CCTGCTGTGCAAGACCGACCCGAAGGCGACGCCGCGGCACAAGGGCATCTCGATCCTGCTCGTCGAGCACGGGCCCGGCC
TGACGGTGTCGCGGGACCTTCCCAAGCTGGGCTACAAGGGCGTCGAGTCCTGCGAGCTGTCCTTCGGCAATTTCCGGGCG
CCTGCGACGGCGGTGCTGGGCGGTGTTGCGGGCCAGGGTTTTTCGCAGATGATGAAGGGTCTGGAGACGGGCCGCATCCA
GGTGGCCGCCCGCGCGCTGGGGGTCGCCACCGCGGCGCTCGAGGATGCGCTGGCCTATGCCCAGCAGCGGGAGAGTTTCG
GGCAGCCGATCTGGCAGCATCAGTCGGTCGGGAATTATCTGGCCGACATGGCGACCAAGCTCACCGCGGCCCGCCAGCTC
ACCCGCTATGCCGCCGAACGTTACGACAGCGGCGAACGCTGCGACATGGAAGCCGGGATGGCGAAACTGTTCGCCTCCGA
GGTCGCCATGGAGATCGCGCTGAACGCCGTGCGCATTCACGGCGGCTACGGCTATTCACAGGAATACGACGTCGAACGGT
ATTTTCGTGACGCGCCCCTGATGATCGTCGGCGAGGGCACCAACGAAATCCAGCGCAACGTGATTGCCCGGCAACTGGTG
ACCCGCGGCGGGATCTGA

Upstream 100 bases:

>100_bases
ACCCTCGCGAATTCGCGCATACCCGTCACTGGTCACAACGCCACATGCTGGTAGGCTGTGGAATCGAGGGTCAATCCGGA
TCGGACCCCAACGTCGACTT

Downstream 100 bases:

>100_bases
CGGCGCAATCGGGGCCGACCCGCAAAGTTTGGGAGTATATTTGCCTGACTTCTGAACCGAAGGGAAAGGCAGCAGCCATG
ACTAATCCCCCCGCGCCGCC

Product: FadE3_2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MGANSRVFAQQVDVRRESVRWAQVNDEEDMLVATVRAFIDREVKPTVREVEHADAYPEAWIEQMKRIGIYGLAVPEEYGG
SPVSMPCYVRVTEQLARGWMSLAGAMGGHTVVAKLLTLFGTEDQKRAYLPRMASGEIRATMALTEPGGGSDLQNMSTTAL
PDPDSDGLVVNGAKTWISNARRSGLIALLCKTDPKATPRHKGISILLVEHGPGLTVSRDLPKLGYKGVESCELSFGNFRA
PATAVLGGVAGQGFSQMMKGLETGRIQVAARALGVATAALEDALAYAQQRESFGQPIWQHQSVGNYLADMATKLTAARQL
TRYAAERYDSGERCDMEAGMAKLFASEVAMEIALNAVRIHGGYGYSQEYDVERYFRDAPLMIVGEGTNEIQRNVIARQLV
TRGGI

Sequences:

>Translated_405_residues
MGANSRVFAQQVDVRRESVRWAQVNDEEDMLVATVRAFIDREVKPTVREVEHADAYPEAWIEQMKRIGIYGLAVPEEYGG
SPVSMPCYVRVTEQLARGWMSLAGAMGGHTVVAKLLTLFGTEDQKRAYLPRMASGEIRATMALTEPGGGSDLQNMSTTAL
PDPDSDGLVVNGAKTWISNARRSGLIALLCKTDPKATPRHKGISILLVEHGPGLTVSRDLPKLGYKGVESCELSFGNFRA
PATAVLGGVAGQGFSQMMKGLETGRIQVAARALGVATAALEDALAYAQQRESFGQPIWQHQSVGNYLADMATKLTAARQL
TRYAAERYDSGERCDMEAGMAKLFASEVAMEIALNAVRIHGGYGYSQEYDVERYFRDAPLMIVGEGTNEIQRNVIARQLV
TRGGI
>Mature_404_residues
GANSRVFAQQVDVRRESVRWAQVNDEEDMLVATVRAFIDREVKPTVREVEHADAYPEAWIEQMKRIGIYGLAVPEEYGGS
PVSMPCYVRVTEQLARGWMSLAGAMGGHTVVAKLLTLFGTEDQKRAYLPRMASGEIRATMALTEPGGGSDLQNMSTTALP
DPDSDGLVVNGAKTWISNARRSGLIALLCKTDPKATPRHKGISILLVEHGPGLTVSRDLPKLGYKGVESCELSFGNFRAP
ATAVLGGVAGQGFSQMMKGLETGRIQVAARALGVATAALEDALAYAQQRESFGQPIWQHQSVGNYLADMATKLTAARQLT
RYAAERYDSGERCDMEAGMAKLFASEVAMEIALNAVRIHGGYGYSQEYDVERYFRDAPLMIVGEGTNEIQRNVIARQLVT
RGGI

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=380, Percent_Identity=38.1578947368421, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI4501859, Length=393, Percent_Identity=33.587786259542, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI226958412, Length=379, Percent_Identity=32.7176781002639, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI226958414, Length=342, Percent_Identity=34.5029239766082, Blast_Score=208, Evalue=7e-54,
Organism=Homo sapiens, GI187960098, Length=382, Percent_Identity=32.1989528795811, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI4557231, Length=382, Percent_Identity=32.1989528795811, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI7656849, Length=383, Percent_Identity=33.1592689295039, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI4501857, Length=381, Percent_Identity=33.5958005249344, Blast_Score=198, Evalue=9e-51,
Organism=Homo sapiens, GI21361497, Length=405, Percent_Identity=31.358024691358, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI76496475, Length=376, Percent_Identity=31.9148936170213, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI4557235, Length=376, Percent_Identity=31.9148936170213, Blast_Score=175, Evalue=5e-44,
Organism=Homo sapiens, GI38505218, Length=400, Percent_Identity=26.75, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI4503943, Length=385, Percent_Identity=25.974025974026, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI7669494, Length=359, Percent_Identity=26.4623955431755, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI48976061, Length=394, Percent_Identity=27.9187817258883, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI211971008, Length=394, Percent_Identity=27.9187817258883, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI87081958, Length=385, Percent_Identity=31.4285714285714, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1786223, Length=389, Percent_Identity=28.7917737789203, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI87081702, Length=413, Percent_Identity=26.3922518159806, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87082384, Length=279, Percent_Identity=26.5232974910394, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17506239, Length=376, Percent_Identity=34.8404255319149, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17538396, Length=380, Percent_Identity=33.4210526315789, Blast_Score=215, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI17570075, Length=382, Percent_Identity=35.6020942408377, Blast_Score=214, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI17508101, Length=377, Percent_Identity=34.7480106100796, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17534899, Length=380, Percent_Identity=33.4210526315789, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17569725, Length=358, Percent_Identity=32.9608938547486, Blast_Score=197, Evalue=8e-51,
Organism=Caenorhabditis elegans, GI17533517, Length=380, Percent_Identity=32.8947368421053, Blast_Score=178, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI71985184, Length=361, Percent_Identity=31.0249307479224, Blast_Score=164, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI71990804, Length=281, Percent_Identity=36.2989323843416, Blast_Score=162, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI32563615, Length=235, Percent_Identity=34.8936170212766, Blast_Score=144, Evalue=8e-35,
Organism=Caenorhabditis elegans, GI71985192, Length=330, Percent_Identity=28.7878787878788, Blast_Score=127, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI17551932, Length=365, Percent_Identity=26.3013698630137, Blast_Score=124, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI17505929, Length=364, Percent_Identity=26.6483516483516, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17534353, Length=388, Percent_Identity=26.0309278350515, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI71982178, Length=274, Percent_Identity=28.4671532846715, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17531909, Length=244, Percent_Identity=27.0491803278689, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562446, Length=355, Percent_Identity=23.943661971831, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24646207, Length=380, Percent_Identity=36.8421052631579, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI21356377, Length=383, Percent_Identity=36.0313315926893, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24666513, Length=376, Percent_Identity=32.4468085106383, Blast_Score=208, Evalue=4e-54,
Organism=Drosophila melanogaster, GI21355753, Length=366, Percent_Identity=33.0601092896175, Blast_Score=200, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24660351, Length=399, Percent_Identity=32.3308270676692, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI281363737, Length=399, Percent_Identity=29.3233082706767, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI19920834, Length=379, Percent_Identity=26.3852242744063, Blast_Score=124, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44052; Mature: 43921

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGANSRVFAQQVDVRRESVRWAQVNDEEDMLVATVRAFIDREVKPTVREVEHADAYPEAW
CCCCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHH
IEQMKRIGIYGLAVPEEYGGSPVSMPCYVRVTEQLARGWMSLAGAMGGHTVVAKLLTLFG
HHHHHHCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
TEDQKRAYLPRMASGEIRATMALTEPGGGSDLQNMSTTALPDPDSDGLVVNGAKTWISNA
CCCHHHHHCCCCCCCCEEEEEEEECCCCCCCHHCCCCCCCCCCCCCCEEEECHHHHHHHH
RRSGLIALLCKTDPKATPRHKGISILLVEHGPGLTVSRDLPKLGYKGVESCELSFGNFRA
CCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCHHCCCCCCCCC
PATAVLGGVAGQGFSQMMKGLETGRIQVAARALGVATAALEDALAYAQQRESFGQPIWQH
CHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QSVGNYLADMATKLTAARQLTRYAAERYDSGERCDMEAGMAKLFASEVAMEIALNAVRIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEE
GGYGYSQEYDVERYFRDAPLMIVGEGTNEIQRNVIARQLVTRGGI
CCCCCCCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GANSRVFAQQVDVRRESVRWAQVNDEEDMLVATVRAFIDREVKPTVREVEHADAYPEAW
CCCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHH
IEQMKRIGIYGLAVPEEYGGSPVSMPCYVRVTEQLARGWMSLAGAMGGHTVVAKLLTLFG
HHHHHHCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
TEDQKRAYLPRMASGEIRATMALTEPGGGSDLQNMSTTALPDPDSDGLVVNGAKTWISNA
CCCHHHHHCCCCCCCCEEEEEEEECCCCCCCHHCCCCCCCCCCCCCCEEEECHHHHHHHH
RRSGLIALLCKTDPKATPRHKGISILLVEHGPGLTVSRDLPKLGYKGVESCELSFGNFRA
CCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCHHCCCCCCCCC
PATAVLGGVAGQGFSQMMKGLETGRIQVAARALGVATAALEDALAYAQQRESFGQPIWQH
CHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QSVGNYLADMATKLTAARQLTRYAAERYDSGERCDMEAGMAKLFASEVAMEIALNAVRIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEE
GGYGYSQEYDVERYFRDAPLMIVGEGTNEIQRNVIARQLVTRGGI
CCCCCCCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]