| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mmpL3
Identifier: 41409739
GI number: 41409739
Start: 4041161
End: 4044034
Strand: Reverse
Name: mmpL3
Synonym: MAP3641c
Alternate gene names: 41409739
Gene position: 4044034-4041161 (Counterclockwise)
Preceding gene: 41409740
Following gene: 41409737
Centisome position: 83.73
GC content: 70.35
Gene sequence:
>2874_bases GTGTTCGCCTGGTGGGGTCGAACTGTGTACCGGTATCGGTACATCGTGATCGGGGTCACGGTAGCTCTGTGCCTGCTCGG CGGCGTTTTCGGCATCAGCCTGGGCAAGCACGTCACCCAGAGCGGCTTCTACGACGACGCCAGCCAGTCCGTCAAGGCGT CGGTGCTCGGCGACCAGACCTACGGCCGCGACCGCACCAGCCACGTGGTGGCCACCTTCACGACGCCCGACGGGAAAACC GTCGACGACGCGGGCTGGCGGGACAAGGTCGTCGCCGAGCTGAACAAGTTCAAAGCCGACCACCCCGACCAGGTCGTCGG GTGGGCCGGCTGGCTGGCGGCGCCGGACAGCACCAACCCGGTGATCAAGGGCATGGTCAGCGAGGACAAGAAGCACACCT TCGTGTCCATCCCGCTCAAGGGCGACGACGACGACACCATCCTGAACAACTACAAGGCCATCGCCCCGGATATGCAGAAG CTCAACGGCGGCGCCGTGCAGCTCGCTGGGCTGGAGCCGATCGCCAACGCGCTGACCGGGACCATCGCCACCGACCAGCG CCGCATGGAGGTCCTCGCGGTGCCGATGGTGGCGGTGGTGCTGTTCCTGGTGTTCGGCGGCGCGGTCGCCGCCGGCCTAC CGGCCATCGTGGGCGGTCTGAGCATCGCCGGCTCGCTGGGCATCCTGCGGCTGGTCGCCGTGTTCGGGCCGGTGCACTAC TTCGCCCAGCCGGTGGTGTCGCTGATCGGCCTGGGCATCGCGATCGACTACGGGCTTTTCGTGGTGAGCCGGTTCCGGGA GGAGATCGCCGAGGGCTACGACACCGAGGCCGCGGTGCGAAGAACCGTGATGACGGCCGGGCGCACAGTGACGTTCTCGG CCGTGCTGATCATCGCGTCGAGCGCCAGCCTGCTGGTGTTGCCGCAGGGCTTCGTGCACTCACTGACCTACGCCATCTTC GCCGCGGTGGGCCTGGCCGCGCTGCTGTCGATCACGTTCCTGCCGGCCTGCCTGGGCATTCTGGGCCGCCACGTCGACGC GCTGGGGGTGCGGACGGCGTTCCGGGTGCCGTTCCTGCGGAACTGGAAGTATTCGCGGGCCTACCTCAACTGGCTGGCCG ACCGGCTGCAGAAGACCAAAACCCGCGAAGAGGTCGAGGCCGGCTTCTGGGGCAAGCTGGTCAACTGGGTGATGCGCAAG CCGCTGGCCTTCGCCATCCCGATCGCCGTGGGCATGATCCTGCTGGTCATCCCGCTGGGCAACCTGTCGTTCGGCGGCAT GAGCGAGAAGTACCTGCCCCCCAACAATCCGGTGCGCCTGGCCCAGGAACACTTCGACAAGCAATTCCCCGGCTACCGCA CCGAGCAGCTGACCGTGGTGATCCAGAGCGACAACCACAGCAAGGTCACCGACCAGCAGGTGGCCGACATCCGCAACCGG ATCTCGGGGATCGGCGGCTTCACCGACAAGACCTGGCAGGAGCGGCCCTGCCCGACCATCGCCGGGAACCCCTGCGTCCC CGGCCCGAACGGCACCACGGTGCCCAAGGACGGCTCGGTGCGGGTGATCCAGAACGGCCTGGCCAACCGCAATGATGCCG CCAAGAAGATCGCCGAACTGCGGGCGGTGAACCCGCCGAAAGGCCTGAACCTGTATGTCGGCGGCACGCCGGCACTCGAG CAGGACAGCATTCACAGCCTGTTCGACAAGGCTCCGTTGATGCTGGTGCTGCTGCTGGGCGCCACGCTGCTGCTGATGTT CCTGGCGTTCGGGTCGGTGGTGCTGCCGATCAAGGCGGTGTTGATGAGCGCGCTCACGCTGGGCTCGACCATGGGCATCC TGACGTGGATCTTCGTCGACGGTCACCTGTCGGGGGTGCTGAACTTCACCCCGACGCCGCTGATGGTGGTGGTGATCGCG CTGGTCGTCGCCGTCGGTTTCGGCCTGGCCACCGACTACGAGGTGTTCCTGGTCTCGCGGATGGTCGAGGCGCGCGAGCG CGGCATGTCGACGGCCGAGGCCATCCGGATCGGCACCGCGACCACCGGGCGGCTGATCACGGCCGCCGCCATGGTGCTGG CCGTGGTCGCCAGTTCGTTCGTGTTCTCCGATCTGGTGCTGATGAAGTACCTGGCCTTCGGTCTGATGGCGGCGCTGCTG CTGGACGCGACGGTGGTGCGGATGTTCCTGGTGCCCTCGGTGATGAAGCTGCTCGGCGACGACTGCTGGTGGGCCCCGCG CTGGGCCCGCCGGCTGCAGAACAAGATCGGGCTGGGCGAGATCGACCTGCCCGACGAGCGCAAGCGGCCCACCCTCAACG GCCGGCCCGCCCGTCCGCCGGTGGCGGCCAGCCTGGTCGCCGCGGCGCCGCGCCCGCCGCACGACCCCACCCACCCCGCG GCGCCGGAGCCGTCGCGGCCGGCGCGCCCCGCTCCCGCGGAGCCTCGGCCCGCGCAGGAACCGGCCGCGAGCACCACCCG CATCCCGGCCCGGCCCAACCAGCCGACCGAGGCCCAGACGACCCGCTTCGCCGCGCCGGGAGCGCCCGGCCGCCAGCGGC CGCCGGAACCACGTCCGGCCACCCCGCAGCGCCCGCCCGCCCAGGCGGCGCCGCCGTCCGGGGATCAGACCCGCGCCATC CCTGTGCCCGGCAACCGGCCCGACGACGGCGACAGCGACGCGGACGCCGCCGAACCCACCACCGCCCTGCCGAAGATGCG GGCGGAAGGCTCGGGCGGCAGCGAGTCCGATGCGGCCGGCGACCAGGCGAACGCGCGCGGTCAGGGCGAGAATGGCGACC CGGCGCGGCAGCGCCGCCGCGCCGGCGGCGGGCTGTCGGCCCAGGACCTGCTGCGCCGCGAGGGCCGGCTGTAA
Upstream 100 bases:
>100_bases CCGTTCCGGCCGCTGTCCGCGCTGTTGACCGCGCGTGTGTGACACTGGAAAACCGATGCGTGGGTCGCTGCAGACTAAGT CGATCCAGTAAGGAGCTTGC
Downstream 100 bases:
>100_bases AGGCCTGGAAACCCCTCAGCCGGAACCGTTTTCGGGTTTGTCCGGCTCTGCCTGCAGGATGGTGTTCTGCTCGTCGGACT CTTCTTCCTGCTTGACGGCT
Product: MmpL3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 957; Mature: 957
Protein sequence:
>957_residues MFAWWGRTVYRYRYIVIGVTVALCLLGGVFGISLGKHVTQSGFYDDASQSVKASVLGDQTYGRDRTSHVVATFTTPDGKT VDDAGWRDKVVAELNKFKADHPDQVVGWAGWLAAPDSTNPVIKGMVSEDKKHTFVSIPLKGDDDDTILNNYKAIAPDMQK LNGGAVQLAGLEPIANALTGTIATDQRRMEVLAVPMVAVVLFLVFGGAVAAGLPAIVGGLSIAGSLGILRLVAVFGPVHY FAQPVVSLIGLGIAIDYGLFVVSRFREEIAEGYDTEAAVRRTVMTAGRTVTFSAVLIIASSASLLVLPQGFVHSLTYAIF AAVGLAALLSITFLPACLGILGRHVDALGVRTAFRVPFLRNWKYSRAYLNWLADRLQKTKTREEVEAGFWGKLVNWVMRK PLAFAIPIAVGMILLVIPLGNLSFGGMSEKYLPPNNPVRLAQEHFDKQFPGYRTEQLTVVIQSDNHSKVTDQQVADIRNR ISGIGGFTDKTWQERPCPTIAGNPCVPGPNGTTVPKDGSVRVIQNGLANRNDAAKKIAELRAVNPPKGLNLYVGGTPALE QDSIHSLFDKAPLMLVLLLGATLLLMFLAFGSVVLPIKAVLMSALTLGSTMGILTWIFVDGHLSGVLNFTPTPLMVVVIA LVVAVGFGLATDYEVFLVSRMVEARERGMSTAEAIRIGTATTGRLITAAAMVLAVVASSFVFSDLVLMKYLAFGLMAALL LDATVVRMFLVPSVMKLLGDDCWWAPRWARRLQNKIGLGEIDLPDERKRPTLNGRPARPPVAASLVAAAPRPPHDPTHPA APEPSRPARPAPAEPRPAQEPAASTTRIPARPNQPTEAQTTRFAAPGAPGRQRPPEPRPATPQRPPAQAAPPSGDQTRAI PVPGNRPDDGDSDADAAEPTTALPKMRAEGSGGSESDAAGDQANARGQGENGDPARQRRRAGGGLSAQDLLRREGRL
Sequences:
>Translated_957_residues MFAWWGRTVYRYRYIVIGVTVALCLLGGVFGISLGKHVTQSGFYDDASQSVKASVLGDQTYGRDRTSHVVATFTTPDGKT VDDAGWRDKVVAELNKFKADHPDQVVGWAGWLAAPDSTNPVIKGMVSEDKKHTFVSIPLKGDDDDTILNNYKAIAPDMQK LNGGAVQLAGLEPIANALTGTIATDQRRMEVLAVPMVAVVLFLVFGGAVAAGLPAIVGGLSIAGSLGILRLVAVFGPVHY FAQPVVSLIGLGIAIDYGLFVVSRFREEIAEGYDTEAAVRRTVMTAGRTVTFSAVLIIASSASLLVLPQGFVHSLTYAIF AAVGLAALLSITFLPACLGILGRHVDALGVRTAFRVPFLRNWKYSRAYLNWLADRLQKTKTREEVEAGFWGKLVNWVMRK PLAFAIPIAVGMILLVIPLGNLSFGGMSEKYLPPNNPVRLAQEHFDKQFPGYRTEQLTVVIQSDNHSKVTDQQVADIRNR ISGIGGFTDKTWQERPCPTIAGNPCVPGPNGTTVPKDGSVRVIQNGLANRNDAAKKIAELRAVNPPKGLNLYVGGTPALE QDSIHSLFDKAPLMLVLLLGATLLLMFLAFGSVVLPIKAVLMSALTLGSTMGILTWIFVDGHLSGVLNFTPTPLMVVVIA LVVAVGFGLATDYEVFLVSRMVEARERGMSTAEAIRIGTATTGRLITAAAMVLAVVASSFVFSDLVLMKYLAFGLMAALL LDATVVRMFLVPSVMKLLGDDCWWAPRWARRLQNKIGLGEIDLPDERKRPTLNGRPARPPVAASLVAAAPRPPHDPTHPA APEPSRPARPAPAEPRPAQEPAASTTRIPARPNQPTEAQTTRFAAPGAPGRQRPPEPRPATPQRPPAQAAPPSGDQTRAI PVPGNRPDDGDSDADAAEPTTALPKMRAEGSGGSESDAAGDQANARGQGENGDPARQRRRAGGGLSAQDLLRREGRL >Mature_957_residues MFAWWGRTVYRYRYIVIGVTVALCLLGGVFGISLGKHVTQSGFYDDASQSVKASVLGDQTYGRDRTSHVVATFTTPDGKT VDDAGWRDKVVAELNKFKADHPDQVVGWAGWLAAPDSTNPVIKGMVSEDKKHTFVSIPLKGDDDDTILNNYKAIAPDMQK LNGGAVQLAGLEPIANALTGTIATDQRRMEVLAVPMVAVVLFLVFGGAVAAGLPAIVGGLSIAGSLGILRLVAVFGPVHY FAQPVVSLIGLGIAIDYGLFVVSRFREEIAEGYDTEAAVRRTVMTAGRTVTFSAVLIIASSASLLVLPQGFVHSLTYAIF AAVGLAALLSITFLPACLGILGRHVDALGVRTAFRVPFLRNWKYSRAYLNWLADRLQKTKTREEVEAGFWGKLVNWVMRK PLAFAIPIAVGMILLVIPLGNLSFGGMSEKYLPPNNPVRLAQEHFDKQFPGYRTEQLTVVIQSDNHSKVTDQQVADIRNR ISGIGGFTDKTWQERPCPTIAGNPCVPGPNGTTVPKDGSVRVIQNGLANRNDAAKKIAELRAVNPPKGLNLYVGGTPALE QDSIHSLFDKAPLMLVLLLGATLLLMFLAFGSVVLPIKAVLMSALTLGSTMGILTWIFVDGHLSGVLNFTPTPLMVVVIA LVVAVGFGLATDYEVFLVSRMVEARERGMSTAEAIRIGTATTGRLITAAAMVLAVVASSFVFSDLVLMKYLAFGLMAALL LDATVVRMFLVPSVMKLLGDDCWWAPRWARRLQNKIGLGEIDLPDERKRPTLNGRPARPPVAASLVAAAPRPPHDPTHPA APEPSRPARPAPAEPRPAQEPAASTTRIPARPNQPTEAQTTRFAAPGAPGRQRPPEPRPATPQRPPAQAAPPSGDQTRAI PVPGNRPDDGDSDADAAEPTTALPKMRAEGSGGSESDAAGDQANARGQGENGDPARQRRRAGGGLSAQDLLRREGRL
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004869 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 102322; Mature: 102322
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAWWGRTVYRYRYIVIGVTVALCLLGGVFGISLGKHVTQSGFYDDASQSVKASVLGDQT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC YGRDRTSHVVATFTTPDGKTVDDAGWRDKVVAELNKFKADHPDQVVGWAGWLAAPDSTNP CCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCCCH VIKGMVSEDKKHTFVSIPLKGDDDDTILNNYKAIAPDMQKLNGGAVQLAGLEPIANALTG HHHHHHCCCCCCEEEEEEECCCCCCHHHHCCHHHCCHHHHCCCCEEEEECCHHHHHHHHC TIATDQRRMEVLAVPMVAVVLFLVFGGAVAAGLPAIVGGLSIAGSLGILRLVAVFGPVHY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAQPVVSLIGLGIAIDYGLFVVSRFREEIAEGYDTEAAVRRTVMTAGRTVTFSAVLIIAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCC SASLLVLPQGFVHSLTYAIFAAVGLAALLSITFLPACLGILGRHVDALGVRTAFRVPFLR CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH NWKYSRAYLNWLADRLQKTKTREEVEAGFWGKLVNWVMRKPLAFAIPIAVGMILLVIPLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC NLSFGGMSEKYLPPNNPVRLAQEHFDKQFPGYRTEQLTVVIQSDNHSKVTDQQVADIRNR CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH ISGIGGFTDKTWQERPCPTIAGNPCVPGPNGTTVPKDGSVRVIQNGLANRNDAAKKIAEL HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHH RAVNPPKGLNLYVGGTPALEQDSIHSLFDKAPLMLVLLLGATLLLMFLAFGSVVLPIKAV HCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMSALTLGSTMGILTWIFVDGHLSGVLNFTPTPLMVVVIALVVAVGFGLATDYEVFLVSR HHHHHHHHHHHHHHHHHHCCCHHCCEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH MVEARERGMSTAEAIRIGTATTGRLITAAAMVLAVVASSFVFSDLVLMKYLAFGLMAALL HHHHHHHCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDATVVRMFLVPSVMKLLGDDCWWAPRWARRLQNKIGLGEIDLPDERKRPTLNGRPARPP HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC VAASLVAAAPRPPHDPTHPAAPEPSRPARPAPAEPRPAQEPAASTTRIPARPNQPTEAQT HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH TRFAAPGAPGRQRPPEPRPATPQRPPAQAAPPSGDQTRAIPVPGNRPDDGDSDADAAEPT HEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC TALPKMRAEGSGGSESDAAGDQANARGQGENGDPARQRRRAGGGLSAQDLLRREGRL HHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCC >Mature Secondary Structure MFAWWGRTVYRYRYIVIGVTVALCLLGGVFGISLGKHVTQSGFYDDASQSVKASVLGDQT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC YGRDRTSHVVATFTTPDGKTVDDAGWRDKVVAELNKFKADHPDQVVGWAGWLAAPDSTNP CCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCCCH VIKGMVSEDKKHTFVSIPLKGDDDDTILNNYKAIAPDMQKLNGGAVQLAGLEPIANALTG HHHHHHCCCCCCEEEEEEECCCCCCHHHHCCHHHCCHHHHCCCCEEEEECCHHHHHHHHC TIATDQRRMEVLAVPMVAVVLFLVFGGAVAAGLPAIVGGLSIAGSLGILRLVAVFGPVHY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAQPVVSLIGLGIAIDYGLFVVSRFREEIAEGYDTEAAVRRTVMTAGRTVTFSAVLIIAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCC SASLLVLPQGFVHSLTYAIFAAVGLAALLSITFLPACLGILGRHVDALGVRTAFRVPFLR CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH NWKYSRAYLNWLADRLQKTKTREEVEAGFWGKLVNWVMRKPLAFAIPIAVGMILLVIPLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC NLSFGGMSEKYLPPNNPVRLAQEHFDKQFPGYRTEQLTVVIQSDNHSKVTDQQVADIRNR CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH ISGIGGFTDKTWQERPCPTIAGNPCVPGPNGTTVPKDGSVRVIQNGLANRNDAAKKIAEL HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHH RAVNPPKGLNLYVGGTPALEQDSIHSLFDKAPLMLVLLLGATLLLMFLAFGSVVLPIKAV HCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMSALTLGSTMGILTWIFVDGHLSGVLNFTPTPLMVVVIALVVAVGFGLATDYEVFLVSR HHHHHHHHHHHHHHHHHHCCCHHCCEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH MVEARERGMSTAEAIRIGTATTGRLITAAAMVLAVVASSFVFSDLVLMKYLAFGLMAALL HHHHHHHCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDATVVRMFLVPSVMKLLGDDCWWAPRWARRLQNKIGLGEIDLPDERKRPTLNGRPARPP HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC VAASLVAAAPRPPHDPTHPAAPEPSRPARPAPAEPRPAQEPAASTTRIPARPNQPTEAQT HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH TRFAAPGAPGRQRPPEPRPATPQRPPAQAAPPSGDQTRAIPVPGNRPDDGDSDADAAEPT HEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC TALPKMRAEGSGGSESDAAGDQANARGQGENGDPARQRRRAGGGLSAQDLLRREGRL HHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]