| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is lprO
Identifier: 41409713
GI number: 41409713
Start: 4011827
End: 4012927
Strand: Reverse
Name: lprO
Synonym: MAP3615c
Alternate gene names: NA
Gene position: 4012927-4011827 (Counterclockwise)
Preceding gene: 41409714
Following gene: 41409697
Centisome position: 83.09
GC content: 71.12
Gene sequence:
>1101_bases ATGGCCGAAAGGGCTATCGTGCTGACCCGACGCGCCAGCTTCCGCCGGCTGGCGGCGTGCTGCACCGCCCTGTCCGCCTG CCTCACCCTGGCCGTCACCTCCGGGCAGCCGCTGGCCCGGGCCGCTGACGGCCGCGACCTGCTGGCCAACGCGATCAGCA GCACCCGCGGCTCCTACCTGGTCTACAACTTCGGCCCCGGCCATCCGGCGCCGATGCTCAACGCCGGCGGCAGCTGGTAT GAGATGAACAACGGCGGGCACCTGATGATCATCAAGAACGCGGCGGGACGGCTTTCGCCGCACCTGCTGGTCGACACCCA CCAGGGCGACCAGGCCCGCTGCGAGAACAACCCCGGCGCCCGCACCGCCGAGGGCCTGTGGCAGGCCTCCGAGCTCTACG CCCCGCTGCAGGCGTGGCAGCGGATGGGCCAGCCGACGATCGCGATCAACGCCAACTTCTTCGACGTGCGCCCGCAGAAG GGCGGCTCCTGGCGCCAGACCGGCTGCAGCTCGCCGCTGGGCGCCTTCGTGGACAACACCAACGGCCGCGGCCGTGCCAA CCAGGCGGTCACCGGCACCGTCGCCTATCCCGGCAAGCAGGGCCTGTCCGGCGGCGGGGAGAGCTGGAGCGCGCTGACCA CGATGATCCTTCCGTCCGGCGGGGCGCCATATGTGGTGTGGCCCAAGACCAAAAGCGACTACGACGCCGCCACTCCCGTC GTCGCCGACCTGCTGAACAAGAACGAGAAGTTCGTCGCGGTCTCCGGCATCGGCCTGCTGGCACCCGGCAACACCGGGCA GCTGCACGACGGCGGGCCGAGCGCGGCGCGCACCGCGATCGGCTACGCCCGGCAGAAGGACGAGATGTACATCTTCGAGG GCGGCAGCTACACCCCGGACAACATGCAGGACCTGTTCCGCGGCCTGGGCAGCGACAACGCCGTGCTGCTCGACGGCGGT GGCTCGTCGGCGATCGTGCTGCGCCGCGACACCGGCGGGATGTGGGCCGGCGCCGGCTCGCCGCGGGGATCGTGCGACAC CCGCCAGGTGCTCTGCGACTCGCATGAGCGGGCGCTGCCCAGCTGGCTGGCCTTCAATTAG
Upstream 100 bases:
>100_bases GCGCAAACGTAATTCGGACGTGCCCGGAACGTCACCGACCCGTTACTTATGTTGACAGCGTGACTTGTGGGGCGGATGAT GTGTGCGTTGCATTCACTTC
Downstream 100 bases:
>100_bases CTTCCGCTGCAGCGGGTTTGGCCGCGGGCGGGCCGAACCGGAAGATCAGCAGGCTGGCGGCGATCACCGCCGCGGCGACC ACGAACACCGGCGCGACCAC
Product: LprO
Products: NA
Alternate protein names: LprO Protein; Lipoprotein
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MAERAIVLTRRASFRRLAACCTALSACLTLAVTSGQPLARAADGRDLLANAISSTRGSYLVYNFGPGHPAPMLNAGGSWY EMNNGGHLMIIKNAAGRLSPHLLVDTHQGDQARCENNPGARTAEGLWQASELYAPLQAWQRMGQPTIAINANFFDVRPQK GGSWRQTGCSSPLGAFVDNTNGRGRANQAVTGTVAYPGKQGLSGGGESWSALTTMILPSGGAPYVVWPKTKSDYDAATPV VADLLNKNEKFVAVSGIGLLAPGNTGQLHDGGPSAARTAIGYARQKDEMYIFEGGSYTPDNMQDLFRGLGSDNAVLLDGG GSSAIVLRRDTGGMWAGAGSPRGSCDTRQVLCDSHERALPSWLAFN
Sequences:
>Translated_366_residues MAERAIVLTRRASFRRLAACCTALSACLTLAVTSGQPLARAADGRDLLANAISSTRGSYLVYNFGPGHPAPMLNAGGSWY EMNNGGHLMIIKNAAGRLSPHLLVDTHQGDQARCENNPGARTAEGLWQASELYAPLQAWQRMGQPTIAINANFFDVRPQK GGSWRQTGCSSPLGAFVDNTNGRGRANQAVTGTVAYPGKQGLSGGGESWSALTTMILPSGGAPYVVWPKTKSDYDAATPV VADLLNKNEKFVAVSGIGLLAPGNTGQLHDGGPSAARTAIGYARQKDEMYIFEGGSYTPDNMQDLFRGLGSDNAVLLDGG GSSAIVLRRDTGGMWAGAGSPRGSCDTRQVLCDSHERALPSWLAFN >Mature_365_residues AERAIVLTRRASFRRLAACCTALSACLTLAVTSGQPLARAADGRDLLANAISSTRGSYLVYNFGPGHPAPMLNAGGSWYE MNNGGHLMIIKNAAGRLSPHLLVDTHQGDQARCENNPGARTAEGLWQASELYAPLQAWQRMGQPTIAINANFFDVRPQKG GSWRQTGCSSPLGAFVDNTNGRGRANQAVTGTVAYPGKQGLSGGGESWSALTTMILPSGGAPYVVWPKTKSDYDAATPVV ADLLNKNEKFVAVSGIGLLAPGNTGQLHDGGPSAARTAIGYARQKDEMYIFEGGSYTPDNMQDLFRGLGSDNAVLLDGGG SSAIVLRRDTGGMWAGAGSPRGSCDTRQVLCDSHERALPSWLAFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38562; Mature: 38430
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERAIVLTRRASFRRLAACCTALSACLTLAVTSGQPLARAADGRDLLANAISSTRGSYL CCCCEEEEECHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCCHHHHHHHHHCCCCCEE VYNFGPGHPAPMLNAGGSWYEMNNGGHLMIIKNAAGRLSPHLLVDTHQGDQARCENNPGA EEECCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCCCHHCCCCCCCC RTAEGLWQASELYAPLQAWQRMGQPTIAINANFFDVRPQKGGSWRQTGCSSPLGAFVDNT CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCHHHEECC NGRGRANQAVTGTVAYPGKQGLSGGGESWSALTTMILPSGGAPYVVWPKTKSDYDAATPV CCCCCCCCEEEEEEECCCCCCCCCCCCCHHEEEEEEECCCCCCEEEECCCCCCCCHHHHH VADLLNKNEKFVAVSGIGLLAPGNTGQLHDGGPSAARTAIGYARQKDEMYIFEGGSYTPD HHHHHCCCCCEEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCH NMQDLFRGLGSDNAVLLDGGGSSAIVLRRDTGGMWAGAGSPRGSCDTRQVLCDSHERALP HHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHCCHHHCCC SWLAFN HHHCCC >Mature Secondary Structure AERAIVLTRRASFRRLAACCTALSACLTLAVTSGQPLARAADGRDLLANAISSTRGSYL CCCEEEEECHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCCHHHHHHHHHCCCCCEE VYNFGPGHPAPMLNAGGSWYEMNNGGHLMIIKNAAGRLSPHLLVDTHQGDQARCENNPGA EEECCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCCCHHCCCCCCCC RTAEGLWQASELYAPLQAWQRMGQPTIAINANFFDVRPQKGGSWRQTGCSSPLGAFVDNT CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCHHHEECC NGRGRANQAVTGTVAYPGKQGLSGGGESWSALTTMILPSGGAPYVVWPKTKSDYDAATPV CCCCCCCCEEEEEEECCCCCCCCCCCCCHHEEEEEEECCCCCCEEEECCCCCCCCHHHHH VADLLNKNEKFVAVSGIGLLAPGNTGQLHDGGPSAARTAIGYARQKDEMYIFEGGSYTPD HHHHHCCCCCEEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCH NMQDLFRGLGSDNAVLLDGGGSSAIVLRRDTGGMWAGAGSPRGSCDTRQVLCDSHERALP HHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHCCHHHCCC SWLAFN HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA