| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is lprK
Identifier: 41409706
GI number: 41409706
Start: 4005488
End: 4006648
Strand: Direct
Name: lprK
Synonym: MAP3608
Alternate gene names: NA
Gene position: 4005488-4006648 (Clockwise)
Preceding gene: 41409705
Following gene: 41409707
Centisome position: 82.93
GC content: 66.41
Gene sequence:
>1161_bases ATGGGCGCGCTTCGGGTGATCCGGCGCCGGTCCTGGCAGGGGCTGACGCTGCTGGTGGCCGCGATGGTGCTGACGTCCTG TGGCTGGAAAGGCATTTCGAACGTCTCCATCCCGGGCGGTCCCGGCAGCGGGCCCAACTCCTACAACATCTACGTGCAGG TGCCCGACACCCTGGCCATCAACGGCAACAGCAAGGTGATGGTCGCCGACGTGTTCGTCGGCTCGATCAAGGCCATCCAG CTGAAGAACTGGATCGCCACGCTGACGCTGGGCATCAATAAGAACGTCAAGCTGCCCAAGAACGCCACCGCCAAGATCGG CCAGACCTCGCTGCTGGGTTCTCAGCACGTCGAACTCGCCGCGCCGCCCAACCCGTCGCCCGAGCTGCTCAAGGACGGCG ACACCATTCCGCTGAAGAACTCGTCGTCCTACCCGACCACCGAGCAGACGCTGGCCAGCCTGTCGCTGATCCTGCGCGGC GGCGGCATCCCCAACCTGGAGGTGCTGCAGAACGAGGTCTACAACATCTTCAACGGGCGCGGCGAGGCGATCCGGGCGCT GCTGGGCAAGCTGGACACCTTCACCAACCAGCTCAACCAGCAGCGCGACGACATCACCCACGCCATCGACTCCACCAACC GGCTGCTCACCTACGTGGGTGGCCGCGCGGACGTGGTGGACCGGCTGCTCACCGACGTGCCGCCGCTGATCAAGCATTTC GCCGACACCAAGCAGCTGCTGATCAACGCCGTCGACTCGGTGGGACGGCTGAGCCAGGCCGCCGACCAGTACCTGTCGGA GGCGCGCGGGCCGCTGCACACCGACCTGCAGGCGCTGCAGTGCCCGCTCAAGGAGCTCGGCAAGGCCTCGCCGTACCTGA TCGGCGCGCTGAAGCTGATCCTGACCCAGCCGTTCGACATCGACACCGTGCCGAAGATCTTCCGCGGCGACTACATCAAC ATCTCGCTGACGCTGGACCTGACCTACAGCGCCGTCGACAACGCGTTCCTCACCGGGACCGGGTTGTCGGGAGCCCTGCG GGCGCTGGAGCAGTCCTACGGCCGTGACCCCGAGACGATGATCCCGGACGTGCGCTACACGCCGAACCCGAACGACGCGC CGGGTGGCCCGCTGGTGGAAAGGGGGGACCGGAATTGCTGA
Upstream 100 bases:
>100_bases CCCCGGCTGACTTCGGAGGTGGCCAGTGAGGCGCGCGACGAGCGCCATGGGCGCGAGGAGCAAGCCGAACCGTCGGCCCC TGAGGGGCGCGACGAGCGCC
Downstream 100 bases:
>100_bases CTCCCTTCGTCCGACGCCAACTGGTCGCCTTCGGGATCCTGACCGTCATCTCGCTGCTCGTGCTCGGCATCTACTACCTG CAGATCCCGAGCCTGGTGGG
Product: LprK
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE Family Protein; Mce Family Lipoe; MCE Family Lipoprotein LprM; Mce Related Protein; MCE-Family Lipoprotein LprL; MCE Family Lipoprotein LprN; MCE Family Lipoprotein; MCE Family Lipoprotein LprK; Mce-Related Protein; LprM Protein; MCE-Family Protein LprN; MCE-Family LipoE; Fis Family Transcriptional Regulator; Mce Family Protein Mce5E; Lipoprotein
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MGALRVIRRRSWQGLTLLVAAMVLTSCGWKGISNVSIPGGPGSGPNSYNIYVQVPDTLAINGNSKVMVADVFVGSIKAIQ LKNWIATLTLGINKNVKLPKNATAKIGQTSLLGSQHVELAAPPNPSPELLKDGDTIPLKNSSSYPTTEQTLASLSLILRG GGIPNLEVLQNEVYNIFNGRGEAIRALLGKLDTFTNQLNQQRDDITHAIDSTNRLLTYVGGRADVVDRLLTDVPPLIKHF ADTKQLLINAVDSVGRLSQAADQYLSEARGPLHTDLQALQCPLKELGKASPYLIGALKLILTQPFDIDTVPKIFRGDYIN ISLTLDLTYSAVDNAFLTGTGLSGALRALEQSYGRDPETMIPDVRYTPNPNDAPGGPLVERGDRNC
Sequences:
>Translated_386_residues MGALRVIRRRSWQGLTLLVAAMVLTSCGWKGISNVSIPGGPGSGPNSYNIYVQVPDTLAINGNSKVMVADVFVGSIKAIQ LKNWIATLTLGINKNVKLPKNATAKIGQTSLLGSQHVELAAPPNPSPELLKDGDTIPLKNSSSYPTTEQTLASLSLILRG GGIPNLEVLQNEVYNIFNGRGEAIRALLGKLDTFTNQLNQQRDDITHAIDSTNRLLTYVGGRADVVDRLLTDVPPLIKHF ADTKQLLINAVDSVGRLSQAADQYLSEARGPLHTDLQALQCPLKELGKASPYLIGALKLILTQPFDIDTVPKIFRGDYIN ISLTLDLTYSAVDNAFLTGTGLSGALRALEQSYGRDPETMIPDVRYTPNPNDAPGGPLVERGDRNC >Mature_385_residues GALRVIRRRSWQGLTLLVAAMVLTSCGWKGISNVSIPGGPGSGPNSYNIYVQVPDTLAINGNSKVMVADVFVGSIKAIQL KNWIATLTLGINKNVKLPKNATAKIGQTSLLGSQHVELAAPPNPSPELLKDGDTIPLKNSSSYPTTEQTLASLSLILRGG GIPNLEVLQNEVYNIFNGRGEAIRALLGKLDTFTNQLNQQRDDITHAIDSTNRLLTYVGGRADVVDRLLTDVPPLIKHFA DTKQLLINAVDSVGRLSQAADQYLSEARGPLHTDLQALQCPLKELGKASPYLIGALKLILTQPFDIDTVPKIFRGDYINI SLTLDLTYSAVDNAFLTGTGLSGALRALEQSYGRDPETMIPDVRYTPNPNDAPGGPLVERGDRNC
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41572; Mature: 41441
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGALRVIRRRSWQGLTLLVAAMVLTSCGWKGISNVSIPGGPGSGPNSYNIYVQVPDTLAI CCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEE NGNSKVMVADVFVGSIKAIQLKNWIATLTLGINKNVKLPKNATAKIGQTSLLGSQHVELA CCCCEEEEEEEECCCHHEEEHHHEEEEEEEECCCCCCCCCCCCHHCCCHHHCCCCCEEEE APPNPSPELLKDGDTIPLKNSSSYPTTEQTLASLSLILRGGGIPNLEVLQNEVYNIFNGR CCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC GEAIRALLGKLDTFTNQLNQQRDDITHAIDSTNRLLTYVGGRADVVDRLLTDVPPLIKHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCHHHHHHH ADTKQLLINAVDSVGRLSQAADQYLSEARGPLHTDLQALQCPLKELGKASPYLIGALKLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCCCHHHHHHHHH LTQPFDIDTVPKIFRGDYINISLTLDLTYSAVDNAFLTGTGLSGALRALEQSYGRDPETM HCCCCCCCCCHHHHCCCEEEEEEEEEEEEHHHCCCEEECCCHHHHHHHHHHHHCCCCHHH IPDVRYTPNPNDAPGGPLVERGDRNC CCCCEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GALRVIRRRSWQGLTLLVAAMVLTSCGWKGISNVSIPGGPGSGPNSYNIYVQVPDTLAI CHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEE NGNSKVMVADVFVGSIKAIQLKNWIATLTLGINKNVKLPKNATAKIGQTSLLGSQHVELA CCCCEEEEEEEECCCHHEEEHHHEEEEEEEECCCCCCCCCCCCHHCCCHHHCCCCCEEEE APPNPSPELLKDGDTIPLKNSSSYPTTEQTLASLSLILRGGGIPNLEVLQNEVYNIFNGR CCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC GEAIRALLGKLDTFTNQLNQQRDDITHAIDSTNRLLTYVGGRADVVDRLLTDVPPLIKHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCHHHHHHH ADTKQLLINAVDSVGRLSQAADQYLSEARGPLHTDLQALQCPLKELGKASPYLIGALKLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCCCHHHHHHHHH LTQPFDIDTVPKIFRGDYINISLTLDLTYSAVDNAFLTGTGLSGALRALEQSYGRDPETM HCCCCCCCCCHHHHCCCEEEEEEEEEEEEHHHCCCEEECCCHHHHHHHHHHHHCCCCHHH IPDVRYTPNPNDAPGGPLVERGDRNC CCCCEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA