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The map label for this gene is glcD [H]

Identifier: 41409676

GI number: 41409676

Start: 3976552

End: 3977892

Strand: Direct

Name: glcD [H]

Synonym: MAP3578

Alternate gene names: 41409676

Gene position: 3976552-3977892 (Clockwise)

Preceding gene: 41409675

Following gene: 41409681

Centisome position: 82.33

GC content: 72.41

Gene sequence:

>1341_bases
ATGCTGCGCGCGTTGGCGGATACGGTCGGATCCACTCACGTCGTCACCGACCCCGACGTGCTGGCGGCGCGCAGCGTCGA
CCACACCGGCCGCTATCGCGGGCGGGCCAGCGCGCTGGTGCGGCCGGGCTCGGCCGAGCAACTCGCCGAGGTGCTGCGGG
TGTGCCGGGACGCCGGCGCCCACGTGACGGTGCAGGGTGGGCGGACGTCGCTGGTGGCCGGGACGGTGCCCGAGCACGAC
GACGTGTTGCTGTCCACCGAACGGCTGCACCGCATCGCCGACGTCGACACCGTCGAGCGTCGCATCGAGGTCGGCGCCGG
GGCCACGCTGGCCGCGGTGCAGCAGGCCGCGTCGGCCGCCAACCTGGTGTTCGGCGTGGACCTCGCGGCCCGCGACAGCG
CGACCGTCGGCGGCATGGCCTCCACGAATGCCGGTGGGCTGCACACTGTTCGGTACGGCAACATGGGCGAGCAGGTGCTC
GGCATCCAGGTCGCGCTGCCCGACGGCGCGCTGCTGCGCCGGCGCAGCCGGGTGCGCCGGGACAACACCGGCTACGACCT
GCCCGCGCTGTTCGTCGGCGCCGAGGGCACGCTGGGCGTGATCACCGAGCTGGACCTGCGACTGCACCCCACCCCGACGC
ACACGGTGACGGCGATCTGCGGGTTCGCCGACCTCGATGCCGTGGTGGCCGCCGGGCGCACGTTCCGCGACGTGGACGGC
ATCGCGGCGCTGGAATTGATCGACGGCCGGGTGGCTGCGCTGACCCGCGAGCATCGCGGCGTGCCCGCCCCGGTCGACGC
CGACTGGCTGCTGCTGGTGGAGTTGGCCGCCGACCACGACCAGACCGAGCGGCTCGCCGGCCTGCTGGACGACGCGCCGC
TCAGCGGCGAACCGGCCGTCGGCGTGGATGCCGTTGCGCGGCAACGGTTGTGGCAGGTCCGGGAGGCGCTGGCCGAGGTG
CTCGGCGTGTACGGGCCGCCGCTGAAGGTCGACGTGTCGTTGCCGCTGTCGTCGATCAGCGAATTCGAGAGAGCCGCAAT
CGATTTGGTGCACACCCACGCGCCCGACGCGCTGCCGGTGTTGTTCGGCCACATCGGCGAGGGCAACCTGCATCTGAACG
TGTTGCACTGTGCGGCCGACCGGGAGCACGCGCTGTATGAGCCGATGATGGATCTCATCGCGGCAAGCGGCGGCAACGTC
AGCTCCGAACACGGCGTCGGCAGCCGCAAGCGGCCCTACCTCGGCATGTCCCGGGAGCCCGCCGACATCGCCGCGATGCG
CACCGTCAAGGCCGCACTCGACCCGACGGGCTACCTCAACGCCGCGGTGCTGTTCGACTGA

Upstream 100 bases:

>100_bases
CGAGTCGTCGTACGCGACCGGCAGCGAATTCGTGATGGACGGCGGACTGGTCACCGACGTGCCGCACAAGCAGTTCTAGC
GCGGTGCTATAACCGCGAAC

Downstream 100 bases:

>100_bases
TCCCGGCCGCCGGTCAGTCGGTCGGCGCCTTGATCCCCACCGCGTGGCGCAGCTGGGCCAGGAACTGATCGGCGTCGTCG
CTGCGCACGATGTAGTGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MLRALADTVGSTHVVTDPDVLAARSVDHTGRYRGRASALVRPGSAEQLAEVLRVCRDAGAHVTVQGGRTSLVAGTVPEHD
DVLLSTERLHRIADVDTVERRIEVGAGATLAAVQQAASAANLVFGVDLAARDSATVGGMASTNAGGLHTVRYGNMGEQVL
GIQVALPDGALLRRRSRVRRDNTGYDLPALFVGAEGTLGVITELDLRLHPTPTHTVTAICGFADLDAVVAAGRTFRDVDG
IAALELIDGRVAALTREHRGVPAPVDADWLLLVELAADHDQTERLAGLLDDAPLSGEPAVGVDAVARQRLWQVREALAEV
LGVYGPPLKVDVSLPLSSISEFERAAIDLVHTHAPDALPVLFGHIGEGNLHLNVLHCAADREHALYEPMMDLIAASGGNV
SSEHGVGSRKRPYLGMSREPADIAAMRTVKAALDPTGYLNAAVLFD

Sequences:

>Translated_446_residues
MLRALADTVGSTHVVTDPDVLAARSVDHTGRYRGRASALVRPGSAEQLAEVLRVCRDAGAHVTVQGGRTSLVAGTVPEHD
DVLLSTERLHRIADVDTVERRIEVGAGATLAAVQQAASAANLVFGVDLAARDSATVGGMASTNAGGLHTVRYGNMGEQVL
GIQVALPDGALLRRRSRVRRDNTGYDLPALFVGAEGTLGVITELDLRLHPTPTHTVTAICGFADLDAVVAAGRTFRDVDG
IAALELIDGRVAALTREHRGVPAPVDADWLLLVELAADHDQTERLAGLLDDAPLSGEPAVGVDAVARQRLWQVREALAEV
LGVYGPPLKVDVSLPLSSISEFERAAIDLVHTHAPDALPVLFGHIGEGNLHLNVLHCAADREHALYEPMMDLIAASGGNV
SSEHGVGSRKRPYLGMSREPADIAAMRTVKAALDPTGYLNAAVLFD
>Mature_446_residues
MLRALADTVGSTHVVTDPDVLAARSVDHTGRYRGRASALVRPGSAEQLAEVLRVCRDAGAHVTVQGGRTSLVAGTVPEHD
DVLLSTERLHRIADVDTVERRIEVGAGATLAAVQQAASAANLVFGVDLAARDSATVGGMASTNAGGLHTVRYGNMGEQVL
GIQVALPDGALLRRRSRVRRDNTGYDLPALFVGAEGTLGVITELDLRLHPTPTHTVTAICGFADLDAVVAAGRTFRDVDG
IAALELIDGRVAALTREHRGVPAPVDADWLLLVELAADHDQTERLAGLLDDAPLSGEPAVGVDAVARQRLWQVREALAEV
LGVYGPPLKVDVSLPLSSISEFERAAIDLVHTHAPDALPVLFGHIGEGNLHLNVLHCAADREHALYEPMMDLIAASGGNV
SSEHGVGSRKRPYLGMSREPADIAAMRTVKAALDPTGYLNAAVLFD

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=439, Percent_Identity=36.4464692482916, Blast_Score=246, Evalue=2e-65,
Organism=Homo sapiens, GI37595756, Length=459, Percent_Identity=30.5010893246187, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI37595754, Length=482, Percent_Identity=29.045643153527, Blast_Score=145, Evalue=7e-35,
Organism=Homo sapiens, GI4501993, Length=190, Percent_Identity=28.9473684210526, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI1789351, Length=454, Percent_Identity=29.7356828193833, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI48994907, Length=485, Percent_Identity=23.5051546391753, Blast_Score=92, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17534361, Length=453, Percent_Identity=28.9183222958057, Blast_Score=204, Evalue=9e-53,
Organism=Caenorhabditis elegans, GI71992373, Length=457, Percent_Identity=27.5711159737418, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI71992381, Length=457, Percent_Identity=27.1334792122538, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI71992392, Length=356, Percent_Identity=28.6516853932584, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17556096, Length=178, Percent_Identity=24.1573033707865, Blast_Score=69, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6320023, Length=446, Percent_Identity=32.5112107623318, Blast_Score=243, Evalue=6e-65,
Organism=Saccharomyces cerevisiae, GI6320764, Length=450, Percent_Identity=31.7777777777778, Blast_Score=235, Evalue=8e-63,
Organism=Saccharomyces cerevisiae, GI6320027, Length=441, Percent_Identity=25.8503401360544, Blast_Score=141, Evalue=2e-34,
Organism=Drosophila melanogaster, GI18921117, Length=449, Percent_Identity=34.075723830735, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24639277, Length=449, Percent_Identity=34.075723830735, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24639275, Length=449, Percent_Identity=34.075723830735, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24653753, Length=187, Percent_Identity=25.1336898395722, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 47005; Mature: 47005

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRALADTVGSTHVVTDPDVLAARSVDHTGRYRGRASALVRPGSAEQLAEVLRVCRDAGA
CCCHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCC
HVTVQGGRTSLVAGTVPEHDDVLLSTERLHRIADVDTVERRIEVGAGATLAAVQQAASAA
EEEEECCCEEEEECCCCCCCCEEEEHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHC
NLVFGVDLAARDSATVGGMASTNAGGLHTVRYGNMGEQVLGIQVALPDGALLRRRSRVRR
CEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHC
DNTGYDLPALFVGAEGTLGVITELDLRLHPTPTHTVTAICGFADLDAVVAAGRTFRDVDG
CCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHCHHHHHHHHHCCCCHHHCCC
IAALELIDGRVAALTREHRGVPAPVDADWLLLVELAADHDQTERLAGLLDDAPLSGEPAV
EEEEHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCC
GVDAVARQRLWQVREALAEVLGVYGPPLKVDVSLPLSSISEFERAAIDLVHTHAPDALPV
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHH
LFGHIGEGNLHLNVLHCAADREHALYEPMMDLIAASGGNVSSEHGVGSRKRPYLGMSREP
HHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
ADIAAMRTVKAALDPTGYLNAAVLFD
HHHHHHHHHHHHCCCCCCCCEEEEEC
>Mature Secondary Structure
MLRALADTVGSTHVVTDPDVLAARSVDHTGRYRGRASALVRPGSAEQLAEVLRVCRDAGA
CCCHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCC
HVTVQGGRTSLVAGTVPEHDDVLLSTERLHRIADVDTVERRIEVGAGATLAAVQQAASAA
EEEEECCCEEEEECCCCCCCCEEEEHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHC
NLVFGVDLAARDSATVGGMASTNAGGLHTVRYGNMGEQVLGIQVALPDGALLRRRSRVRR
CEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHC
DNTGYDLPALFVGAEGTLGVITELDLRLHPTPTHTVTAICGFADLDAVVAAGRTFRDVDG
CCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHCHHHHHHHHHCCCCHHHCCC
IAALELIDGRVAALTREHRGVPAPVDADWLLLVELAADHDQTERLAGLLDDAPLSGEPAV
EEEEHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCC
GVDAVARQRLWQVREALAEVLGVYGPPLKVDVSLPLSSISEFERAAIDLVHTHAPDALPV
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHH
LFGHIGEGNLHLNVLHCAADREHALYEPMMDLIAASGGNVSSEHGVGSRKRPYLGMSREP
HHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
ADIAAMRTVKAALDPTGYLNAAVLFD
HHHHHHHHHHHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]