Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409661

Identifier: 41409661

GI number: 41409661

Start: 3961985

End: 3962926

Strand: Direct

Name: 41409661

Synonym: MAP3563

Alternate gene names: NA

Gene position: 3961985-3962926 (Clockwise)

Preceding gene: 41409660

Following gene: 41409662

Centisome position: 82.03

GC content: 73.25

Gene sequence:

>942_bases
ATGACTGATCTGGACTCCTCGCTGCCGCCGTCCGTCCGGACCGCCGGCGACAGCTGGACCATCACCGAACTCGTCGGCGC
CACCGCGTTGGGCGTCGCCGCGGCGCGTGCGGCGGAGACCGCCGGTCCCGATCCGCTGATCCGCGACGAATTCGCCGGTC
TGCTGGTGTCGTCCGCCAGCCCGGCCTGGGCGCGGCTGGCCGACCCGGAGCTGTCCTGGCTCGACGACGATCCGCACGGC
AAACGCGCGCACCGCGTCGGCATCGACTACCAGGCCGTGCGCACCCACTACTTCGACGAGTACTTCGACGGCGCGCTGCG
TGCCGGGATCCGGCAGGTGGTGATCCTGGCCGCCGGGCTGGACTCGCGGGCCTACCGACTGAACTGGCCCGCCGGCACCA
CCGTCTACGAGATCGACCAGCCCAAGGTGCTGGAGTACAAGACCGAGACCCTGCAGCGGCACGGCGCCACCCCCGCCGCC
GTCCGGCGTCCCGTCCCAGTCGACCTGCGTGACGACTGGCCCGCGGCCCTGACCGCCGCCGGCTTCCAGGCCGCCCGGCC
CACCGCCTGGCTGGCCGAAGGACTGCTGCCCTACCTGCCGAGCGACGCCCAGGACCGGCTGTTCGAGATGGTCACCGCGC
TCAGCGCCGCCGGCAGCCAGGTCGCCGTCGAGGTGTTCGGCATGAACTCGCGCAGCAACGCGCAGCGCTGGCTGCGGATG
CGCGAGCGGCTGGGCCTGGACGTCAACGTCGCCGCGCTGACCTACCACGAGCCGGACCGCTCGGATGCCGCCGCCTGGCT
GGCCAGACACGGCTGGCGGGTGCACAGCGTCGACAACCGCGACGAGATGGCCCGGCTGGGCCGCCCGGTACCCGAGGACC
TGTCCGACGAGGCGGTCCGCAGCACGTTGCTGCGCGCCCACCTCGGCGGGTCCACCGGCTGA

Upstream 100 bases:

>100_bases
GCGCTGTGGCGTCCCGGGTCCTAAGCGCGGACGGGCGCGCAGTGAAGTTGCGCACAAAGCGTATAGGCTAACTAACTTAT
CCCGGTAGCATGGTCCGGAC

Downstream 100 bases:

>100_bases
CTTCCCCCGAGGATTCCAAGGAGCAAACGCCATGAGCTCACTGCGCACCCACGACGACACCTGGGACATCAAGAGCAGTG
TCGGCACCACCGCGGTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTDLDSSLPPSVRTAGDSWTITELVGATALGVAAARAAETAGPDPLIRDEFAGLLVSSASPAWARLADPELSWLDDDPHG
KRAHRVGIDYQAVRTHYFDEYFDGALRAGIRQVVILAAGLDSRAYRLNWPAGTTVYEIDQPKVLEYKTETLQRHGATPAA
VRRPVPVDLRDDWPAALTAAGFQAARPTAWLAEGLLPYLPSDAQDRLFEMVTALSAAGSQVAVEVFGMNSRSNAQRWLRM
RERLGLDVNVAALTYHEPDRSDAAAWLARHGWRVHSVDNRDEMARLGRPVPEDLSDEAVRSTLLRAHLGGSTG

Sequences:

>Translated_313_residues
MTDLDSSLPPSVRTAGDSWTITELVGATALGVAAARAAETAGPDPLIRDEFAGLLVSSASPAWARLADPELSWLDDDPHG
KRAHRVGIDYQAVRTHYFDEYFDGALRAGIRQVVILAAGLDSRAYRLNWPAGTTVYEIDQPKVLEYKTETLQRHGATPAA
VRRPVPVDLRDDWPAALTAAGFQAARPTAWLAEGLLPYLPSDAQDRLFEMVTALSAAGSQVAVEVFGMNSRSNAQRWLRM
RERLGLDVNVAALTYHEPDRSDAAAWLARHGWRVHSVDNRDEMARLGRPVPEDLSDEAVRSTLLRAHLGGSTG
>Mature_312_residues
TDLDSSLPPSVRTAGDSWTITELVGATALGVAAARAAETAGPDPLIRDEFAGLLVSSASPAWARLADPELSWLDDDPHGK
RAHRVGIDYQAVRTHYFDEYFDGALRAGIRQVVILAAGLDSRAYRLNWPAGTTVYEIDQPKVLEYKTETLQRHGATPAAV
RRPVPVDLRDDWPAALTAAGFQAARPTAWLAEGLLPYLPSDAQDRLFEMVTALSAAGSQVAVEVFGMNSRSNAQRWLRMR
ERLGLDVNVAALTYHEPDRSDAAAWLARHGWRVHSVDNRDEMARLGRPVPEDLSDEAVRSTLLRAHLGGSTG

Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity

COG id: COG3315

COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0677 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3563_MYCPA (Q73U05)

Other databases:

- EMBL:   AE016958
- RefSeq:   NP_962497.1
- ProteinModelPortal:   Q73U05
- SMR:   Q73U05
- EnsemblBacteria:   EBMYCT00000038034
- GeneID:   2718389
- GenomeReviews:   AE016958_GR
- KEGG:   mpa:MAP3563
- NMPDR:   fig|262316.1.peg.3563
- GeneTree:   EBGT00050000015698
- HOGENOM:   HBG570783
- OMA:   QDRLFEM
- ProtClustDB:   CLSK790299
- InterPro:   IPR011610
- InterPro:   IPR007213
- TIGRFAMs:   TIGR00027

Pfam domain/function: PF04072 LCM

EC number: NA

Molecular weight: Translated: 34153; Mature: 34021

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: BINDING 139-139

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLDSSLPPSVRTAGDSWTITELVGATALGVAAARAAETAGPDPLIRDEFAGLLVSSAS
CCCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
PAWARLADPELSWLDDDPHGKRAHRVGIDYQAVRTHYFDEYFDGALRAGIRQVVILAAGL
CCHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
DSRAYRLNWPAGTTVYEIDQPKVLEYKTETLQRHGATPAAVRRPVPVDLRDDWPAALTAA
CCCEEEEECCCCCEEEECCCCCEEHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHH
GFQAARPTAWLAEGLLPYLPSDAQDRLFEMVTALSAAGSQVAVEVFGMNSRSNAQRWLRM
CCHHCCCHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
RERLGLDVNVAALTYHEPDRSDAAAWLARHGWRVHSVDNRDEMARLGRPVPEDLSDEAVR
HHHCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCCCCHHHHHH
STLLRAHLGGSTG
HHHHHHHCCCCCC
>Mature Secondary Structure 
TDLDSSLPPSVRTAGDSWTITELVGATALGVAAARAAETAGPDPLIRDEFAGLLVSSAS
CCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
PAWARLADPELSWLDDDPHGKRAHRVGIDYQAVRTHYFDEYFDGALRAGIRQVVILAAGL
CCHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
DSRAYRLNWPAGTTVYEIDQPKVLEYKTETLQRHGATPAAVRRPVPVDLRDDWPAALTAA
CCCEEEEECCCCCEEEECCCCCEEHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHH
GFQAARPTAWLAEGLLPYLPSDAQDRLFEMVTALSAAGSQVAVEVFGMNSRSNAQRWLRM
CCHHCCCHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
RERLGLDVNVAALTYHEPDRSDAAAWLARHGWRVHSVDNRDEMARLGRPVPEDLSDEAVR
HHHCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCCCCHHHHHH
STLLRAHLGGSTG
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA