| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409661
Identifier: 41409661
GI number: 41409661
Start: 3961985
End: 3962926
Strand: Direct
Name: 41409661
Synonym: MAP3563
Alternate gene names: NA
Gene position: 3961985-3962926 (Clockwise)
Preceding gene: 41409660
Following gene: 41409662
Centisome position: 82.03
GC content: 73.25
Gene sequence:
>942_bases ATGACTGATCTGGACTCCTCGCTGCCGCCGTCCGTCCGGACCGCCGGCGACAGCTGGACCATCACCGAACTCGTCGGCGC CACCGCGTTGGGCGTCGCCGCGGCGCGTGCGGCGGAGACCGCCGGTCCCGATCCGCTGATCCGCGACGAATTCGCCGGTC TGCTGGTGTCGTCCGCCAGCCCGGCCTGGGCGCGGCTGGCCGACCCGGAGCTGTCCTGGCTCGACGACGATCCGCACGGC AAACGCGCGCACCGCGTCGGCATCGACTACCAGGCCGTGCGCACCCACTACTTCGACGAGTACTTCGACGGCGCGCTGCG TGCCGGGATCCGGCAGGTGGTGATCCTGGCCGCCGGGCTGGACTCGCGGGCCTACCGACTGAACTGGCCCGCCGGCACCA CCGTCTACGAGATCGACCAGCCCAAGGTGCTGGAGTACAAGACCGAGACCCTGCAGCGGCACGGCGCCACCCCCGCCGCC GTCCGGCGTCCCGTCCCAGTCGACCTGCGTGACGACTGGCCCGCGGCCCTGACCGCCGCCGGCTTCCAGGCCGCCCGGCC CACCGCCTGGCTGGCCGAAGGACTGCTGCCCTACCTGCCGAGCGACGCCCAGGACCGGCTGTTCGAGATGGTCACCGCGC TCAGCGCCGCCGGCAGCCAGGTCGCCGTCGAGGTGTTCGGCATGAACTCGCGCAGCAACGCGCAGCGCTGGCTGCGGATG CGCGAGCGGCTGGGCCTGGACGTCAACGTCGCCGCGCTGACCTACCACGAGCCGGACCGCTCGGATGCCGCCGCCTGGCT GGCCAGACACGGCTGGCGGGTGCACAGCGTCGACAACCGCGACGAGATGGCCCGGCTGGGCCGCCCGGTACCCGAGGACC TGTCCGACGAGGCGGTCCGCAGCACGTTGCTGCGCGCCCACCTCGGCGGGTCCACCGGCTGA
Upstream 100 bases:
>100_bases GCGCTGTGGCGTCCCGGGTCCTAAGCGCGGACGGGCGCGCAGTGAAGTTGCGCACAAAGCGTATAGGCTAACTAACTTAT CCCGGTAGCATGGTCCGGAC
Downstream 100 bases:
>100_bases CTTCCCCCGAGGATTCCAAGGAGCAAACGCCATGAGCTCACTGCGCACCCACGACGACACCTGGGACATCAAGAGCAGTG TCGGCACCACCGCGGTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTDLDSSLPPSVRTAGDSWTITELVGATALGVAAARAAETAGPDPLIRDEFAGLLVSSASPAWARLADPELSWLDDDPHG KRAHRVGIDYQAVRTHYFDEYFDGALRAGIRQVVILAAGLDSRAYRLNWPAGTTVYEIDQPKVLEYKTETLQRHGATPAA VRRPVPVDLRDDWPAALTAAGFQAARPTAWLAEGLLPYLPSDAQDRLFEMVTALSAAGSQVAVEVFGMNSRSNAQRWLRM RERLGLDVNVAALTYHEPDRSDAAAWLARHGWRVHSVDNRDEMARLGRPVPEDLSDEAVRSTLLRAHLGGSTG
Sequences:
>Translated_313_residues MTDLDSSLPPSVRTAGDSWTITELVGATALGVAAARAAETAGPDPLIRDEFAGLLVSSASPAWARLADPELSWLDDDPHG KRAHRVGIDYQAVRTHYFDEYFDGALRAGIRQVVILAAGLDSRAYRLNWPAGTTVYEIDQPKVLEYKTETLQRHGATPAA VRRPVPVDLRDDWPAALTAAGFQAARPTAWLAEGLLPYLPSDAQDRLFEMVTALSAAGSQVAVEVFGMNSRSNAQRWLRM RERLGLDVNVAALTYHEPDRSDAAAWLARHGWRVHSVDNRDEMARLGRPVPEDLSDEAVRSTLLRAHLGGSTG >Mature_312_residues TDLDSSLPPSVRTAGDSWTITELVGATALGVAAARAAETAGPDPLIRDEFAGLLVSSASPAWARLADPELSWLDDDPHGK RAHRVGIDYQAVRTHYFDEYFDGALRAGIRQVVILAAGLDSRAYRLNWPAGTTVYEIDQPKVLEYKTETLQRHGATPAAV RRPVPVDLRDDWPAALTAAGFQAARPTAWLAEGLLPYLPSDAQDRLFEMVTALSAAGSQVAVEVFGMNSRSNAQRWLRMR ERLGLDVNVAALTYHEPDRSDAAAWLARHGWRVHSVDNRDEMARLGRPVPEDLSDEAVRSTLLRAHLGGSTG
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
COG id: COG3315
COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3563_MYCPA (Q73U05)
Other databases:
- EMBL: AE016958 - RefSeq: NP_962497.1 - ProteinModelPortal: Q73U05 - SMR: Q73U05 - EnsemblBacteria: EBMYCT00000038034 - GeneID: 2718389 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP3563 - NMPDR: fig|262316.1.peg.3563 - GeneTree: EBGT00050000015698 - HOGENOM: HBG570783 - OMA: QDRLFEM - ProtClustDB: CLSK790299 - InterPro: IPR011610 - InterPro: IPR007213 - TIGRFAMs: TIGR00027
Pfam domain/function: PF04072 LCM
EC number: NA
Molecular weight: Translated: 34153; Mature: 34021
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: BINDING 139-139
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLDSSLPPSVRTAGDSWTITELVGATALGVAAARAAETAGPDPLIRDEFAGLLVSSAS CCCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC PAWARLADPELSWLDDDPHGKRAHRVGIDYQAVRTHYFDEYFDGALRAGIRQVVILAAGL CCHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC DSRAYRLNWPAGTTVYEIDQPKVLEYKTETLQRHGATPAAVRRPVPVDLRDDWPAALTAA CCCEEEEECCCCCEEEECCCCCEEHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHH GFQAARPTAWLAEGLLPYLPSDAQDRLFEMVTALSAAGSQVAVEVFGMNSRSNAQRWLRM CCHHCCCHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH RERLGLDVNVAALTYHEPDRSDAAAWLARHGWRVHSVDNRDEMARLGRPVPEDLSDEAVR HHHCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCCCCHHHHHH STLLRAHLGGSTG HHHHHHHCCCCCC >Mature Secondary Structure TDLDSSLPPSVRTAGDSWTITELVGATALGVAAARAAETAGPDPLIRDEFAGLLVSSAS CCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC PAWARLADPELSWLDDDPHGKRAHRVGIDYQAVRTHYFDEYFDGALRAGIRQVVILAAGL CCHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC DSRAYRLNWPAGTTVYEIDQPKVLEYKTETLQRHGATPAAVRRPVPVDLRDDWPAALTAA CCCEEEEECCCCCEEEECCCCCEEHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHH GFQAARPTAWLAEGLLPYLPSDAQDRLFEMVTALSAAGSQVAVEVFGMNSRSNAQRWLRM CCHHCCCHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH RERLGLDVNVAALTYHEPDRSDAAAWLARHGWRVHSVDNRDEMARLGRPVPEDLSDEAVR HHHCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCCCCHHHHHH STLLRAHLGGSTG HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA