Click here to switch to the map view.

The map label for this gene is hcr [C]

Identifier: 41409643

GI number: 41409643

Start: 3946752

End: 3947846

Strand: Direct

Name: hcr [C]

Synonym: MAP3545

Alternate gene names: 41409643

Gene position: 3946752-3947846 (Clockwise)

Preceding gene: 41409641

Following gene: 41409644

Centisome position: 81.72

GC content: 69.59

Gene sequence:

>1095_bases
ATGTTCACTCAAACTGTTCAGGCTTCCGGCCGGGTCCTCGCGCGGACCGTGCGGCAGCGGGTGCTGGGTTCGGAGCTGCT
CGACCTGCTGACCGGTCCGCACGGCGTCGATCGTTACACCGAGCTGGTGGCACCGACGTGGACGCTGGGCGAGGCCCGCG
CCAAAGTGACCGACGTGCGCCGCACCACGCCGCGCAGCGTCACGCTCACCCTGGAGCCCAACGACACCTTCCTGTCCAGC
CATACCGTCACAGCCGGCCAGTACGTCAACCTCACCGTGGAGATCGACGGGCGGCGGCACACCCGGTGCTATTCGCCGGC
CAACCGCGAAGGGACGGCCACCCTCGAGTTGACCATCGGCCGGCACGACGGCGGGCTGGTCTCGAACCATCTGTACGACC
ACGCCCGACGCGGCATGGTGGTCGGCCTGGCCGGCGTCGGCGGCGATTTCGTGTTGCCGACCCCGCGCCCGCGGCGCGTC
CTGTTCGTCTCCGGGGGCAGCGGTATCACCCCGGTGATGGCGATGGTGCGCACCCTGGTTTCCCAGCGGCATCGCGGCGA
GATCGCCTTCATTCACTACGCGCCGACCCCCGCCGAGGCCTGCTACCGCGAGGAATTGGCCGCGCTGCCGTCGGTGCGGG
TGCTGCACGGGTACACCCGATCCGCGGGCGGCGACCTTTCCGGACGCTTCGGGCCCGACCACCTGGCCGCCGCGATGCCC
GCACCAGATGCGGTGTTCGTCTGCGGCCCAACATCTTTGGTCGATGCCGTCCGAGAGCACTGCGACAACGTCTACACCGA
AAGCTTCACTCCGCCGGTGCTCGAGGCGCCGGCCGACCCGTCCGGCGGACGAGTCACGTTCTCCGACAGCGGCGTCGACG
TCGTCGACGACGGGCGGTCCTTGCTGGAGCAGGCCGAGGCCGCCGGACTGTCCCCGCAAAACGGGTGCCGGATGGGCATC
TGTCACACCTGCACGCGGCGCAAAACCGCCGGCACCGTGCGCAACCTGGTCACCGGTGCGGTCTCGACCGCTCCCGATGA
GGACGTGCAGATCTGCGTGTCCGTTCCGGTCGGTGACGTGGACCTGTCCCTCTGA

Upstream 100 bases:

>100_bases
CACCCGTGAGCTAGGAGTACGGCTGTTCACTATGTGAACCCTACCACATACGGGCAGTAAACCCTTGACTGCTCGGCCGG
GGCGGAGCAACGGTGTACGT

Downstream 100 bases:

>100_bases
GGAGGAAAAACCGTGACACACAACAAGATAACCCTGACCCCCGAACAGGCCGAGGAATTCGGCCGTGAGCTCGACGCCCT
CAAGGAACGGGTGATGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MFTQTVQASGRVLARTVRQRVLGSELLDLLTGPHGVDRYTELVAPTWTLGEARAKVTDVRRTTPRSVTLTLEPNDTFLSS
HTVTAGQYVNLTVEIDGRRHTRCYSPANREGTATLELTIGRHDGGLVSNHLYDHARRGMVVGLAGVGGDFVLPTPRPRRV
LFVSGGSGITPVMAMVRTLVSQRHRGEIAFIHYAPTPAEACYREELAALPSVRVLHGYTRSAGGDLSGRFGPDHLAAAMP
APDAVFVCGPTSLVDAVREHCDNVYTESFTPPVLEAPADPSGGRVTFSDSGVDVVDDGRSLLEQAEAAGLSPQNGCRMGI
CHTCTRRKTAGTVRNLVTGAVSTAPDEDVQICVSVPVGDVDLSL

Sequences:

>Translated_364_residues
MFTQTVQASGRVLARTVRQRVLGSELLDLLTGPHGVDRYTELVAPTWTLGEARAKVTDVRRTTPRSVTLTLEPNDTFLSS
HTVTAGQYVNLTVEIDGRRHTRCYSPANREGTATLELTIGRHDGGLVSNHLYDHARRGMVVGLAGVGGDFVLPTPRPRRV
LFVSGGSGITPVMAMVRTLVSQRHRGEIAFIHYAPTPAEACYREELAALPSVRVLHGYTRSAGGDLSGRFGPDHLAAAMP
APDAVFVCGPTSLVDAVREHCDNVYTESFTPPVLEAPADPSGGRVTFSDSGVDVVDDGRSLLEQAEAAGLSPQNGCRMGI
CHTCTRRKTAGTVRNLVTGAVSTAPDEDVQICVSVPVGDVDLSL
>Mature_364_residues
MFTQTVQASGRVLARTVRQRVLGSELLDLLTGPHGVDRYTELVAPTWTLGEARAKVTDVRRTTPRSVTLTLEPNDTFLSS
HTVTAGQYVNLTVEIDGRRHTRCYSPANREGTATLELTIGRHDGGLVSNHLYDHARRGMVVGLAGVGGDFVLPTPRPRRV
LFVSGGSGITPVMAMVRTLVSQRHRGEIAFIHYAPTPAEACYREELAALPSVRVLHGYTRSAGGDLSGRFGPDHLAAAMP
APDAVFVCGPTSLVDAVREHCDNVYTESFTPPVLEAPADPSGGRVTFSDSGVDVVDDGRSLLEQAEAAGLSPQNGCRMGI
CHTCTRRKTAGTVRNLVTGAVSTAPDEDVQICVSVPVGDVDLSL

Specific function: This is an electron transfer partner for desA3 [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787098, Length=322, Percent_Identity=26.3975155279503, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787658, Length=322, Percent_Identity=23.6024844720497, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788903, Length=281, Percent_Identity=26.3345195729537, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38847; Mature: 38847

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTQTVQASGRVLARTVRQRVLGSELLDLLTGPHGVDRYTELVAPTWTLGEARAKVTDVR
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH
RTTPRSVTLTLEPNDTFLSSHTVTAGQYVNLTVEIDGRRHTRCYSPANREGTATLELTIG
CCCCCEEEEEECCCCCEECCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEE
RHDGGLVSNHLYDHARRGMVVGLAGVGGDFVLPTPRPRRVLFVSGGSGITPVMAMVRTLV
CCCCCCHHHHHHHHHHCCEEEEEECCCCCEECCCCCCCEEEEEECCCCHHHHHHHHHHHH
SQRHRGEIAFIHYAPTPAEACYREELAALPSVRVLHGYTRSAGGDLSGRFGPDHLAAAMP
HHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEHHCCCCCCCCCCCCCCCHHHHHHCCC
APDAVFVCGPTSLVDAVREHCDNVYTESFTPPVLEAPADPSGGRVTFSDSGVDVVDDGRS
CCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEECCCCCEEECCCHH
LLEQAEAAGLSPQNGCRMGICHTCTRRKTAGTVRNLVTGAVSTAPDEDVQICVSVPVGDV
HHHHHHHCCCCCCCCCEECHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
DLSL
CCCC
>Mature Secondary Structure
MFTQTVQASGRVLARTVRQRVLGSELLDLLTGPHGVDRYTELVAPTWTLGEARAKVTDVR
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH
RTTPRSVTLTLEPNDTFLSSHTVTAGQYVNLTVEIDGRRHTRCYSPANREGTATLELTIG
CCCCCEEEEEECCCCCEECCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEE
RHDGGLVSNHLYDHARRGMVVGLAGVGGDFVLPTPRPRRVLFVSGGSGITPVMAMVRTLV
CCCCCCHHHHHHHHHHCCEEEEEECCCCCEECCCCCCCEEEEEECCCCHHHHHHHHHHHH
SQRHRGEIAFIHYAPTPAEACYREELAALPSVRVLHGYTRSAGGDLSGRFGPDHLAAAMP
HHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEHHCCCCCCCCCCCCCCCHHHHHHCCC
APDAVFVCGPTSLVDAVREHCDNVYTESFTPPVLEAPADPSGGRVTFSDSGVDVVDDGRS
CCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEECCCCCEEECCCHH
LLEQAEAAGLSPQNGCRMGICHTCTRRKTAGTVRNLVTGAVSTAPDEDVQICVSVPVGDV
HHHHHHHCCCCCCCCCEECHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
DLSL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]