Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409633

Identifier: 41409633

GI number: 41409633

Start: 3939139

End: 3939441

Strand: Direct

Name: 41409633

Synonym: MAP3535

Alternate gene names: NA

Gene position: 3939139-3939441 (Clockwise)

Preceding gene: 41409628

Following gene: 41409634

Centisome position: 81.56

GC content: 68.32

Gene sequence:

>303_bases
ATGGCAATCGACAGCGGCCGCACCCGCAAAGCCGACGCCGCCCGGCACGACCCCGGCGACATCGACGTCGTCCTGACCCG
GCTGCGCCGGGCGCACGGTCAGCTGGGTGGCGTCATCGCGATGATCGAGCAGGGCCGCAGCTGCAAGGACGTGGTCACCC
AGCTGGCCGCGGTGTCGAAGGCGCTGGACCGGGCGGGCTTCAAGATCATCGCCTCGGGCTTGCGCGATTGCATCACGCGG
ACCGAGCAGCAACCGCCCCTGTCGATCGATGAGCTGGAAAAACTGTTCCTGAGCCTGGCCTGA

Upstream 100 bases:

>100_bases
GGCGATCAGCAGCAGCCTCACCCGGCCATTGTGCGTGCCGGGCGCGGTCACCCGAACCAGCGCCGCGGCATATACCATAC
GGGGTAGGGTATAAATGGAT

Downstream 100 bases:

>100_bases
CTGCGGGGCCGGAACGACGAGCGGTCGCAAACAGGAGGAATCACAGGTGACATCGAAATTGAGCACCACGCTGCACACCT
CGTTCCCGGACGCGGTGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MAIDSGRTRKADAARHDPGDIDVVLTRLRRAHGQLGGVIAMIEQGRSCKDVVTQLAAVSKALDRAGFKIIASGLRDCITR
TEQQPPLSIDELEKLFLSLA

Sequences:

>Translated_100_residues
MAIDSGRTRKADAARHDPGDIDVVLTRLRRAHGQLGGVIAMIEQGRSCKDVVTQLAAVSKALDRAGFKIIASGLRDCITR
TEQQPPLSIDELEKLFLSLA
>Mature_99_residues
AIDSGRTRKADAARHDPGDIDVVLTRLRRAHGQLGGVIAMIEQGRSCKDVVTQLAAVSKALDRAGFKIIASGLRDCITRT
EQQPPLSIDELEKLFLSLA

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10825; Mature: 10693

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDSGRTRKADAARHDPGDIDVVLTRLRRAHGQLGGVIAMIEQGRSCKDVVTQLAAVSK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALDRAGFKIIASGLRDCITRTEQQPPLSIDELEKLFLSLA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AIDSGRTRKADAARHDPGDIDVVLTRLRRAHGQLGGVIAMIEQGRSCKDVVTQLAAVSK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALDRAGFKIIASGLRDCITRTEQQPPLSIDELEKLFLSLA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA