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The map label for this gene is 41409618

Identifier: 41409618

GI number: 41409618

Start: 3920846

End: 3921604

Strand: Reverse

Name: 41409618

Synonym: MAP3520c

Alternate gene names: NA

Gene position: 3921604-3920846 (Counterclockwise)

Preceding gene: 41409621

Following gene: 41409616

Centisome position: 81.2

GC content: 67.46

Gene sequence:

>759_bases
ATGCGTCGAGCGGGTCGTTATCTATTTGTTATGGTCGCGATCACGGTCATGGCCCTGGTAGCGCCGGTCGGCCGCGGCGG
CGCTTCGGTGCCGTTGCCGCAGCCCGTCCCCGGCATCGCCTCGATTTTGCCCGCCAACGGGGCCGTGGTGGGTGTGGCCC
ACCCGATCGTCGTGACGTTCACCGCACCGGCGGCCGACCGGGCCGCCGTCGAGCGGTCGATTCACGTGGTGTCGCCGGCC
GGTGTCCGCGGGCATTTCGAGTGGGCCGACGACAACACGGTCGTCCGGTTCGTCCCGAACCGGTATTGGCCCGCGCACGG
CCACGTTTCGGTCGGCGTGCAGGCGCTGACCACCGGTTTCGACACCGGCGACGCGCTGCTGGGCGTTGCCAGCATCTCCA
AACACACCTTCACCGTGAGCCGCAACGGCGAGGTGCTGCGCACCATGCCGGCGTCGATGGGCAAACCCAGCCGGCCCACC
CCGATCGGTAATTTCACCGCGCTGGAAAAGCAGCGTTCGGTGGTGATGGACTCGCGCACCATCGGCATCCCGCTCAGCTC
GCCGGAGGGCTACAAGATCACCGCCCAGTACGCGGTTCGGGTCACCTGGAGCGGGGTGTACGTGCATTCGGCGCCGTGGT
CGGTCGACTCGCAGGGCTACGCGAACGTCAGCCATGGATACATCAACCTGAGCCCCGACAACGCCGCGTGGTACTTCAAC
GAGGTCAACGTCGGCGACCCCATCCAGGTCGTGGCCTGA

Upstream 100 bases:

>100_bases
CCGACCCAACCGGACTGTCATTGTTTGCTGAAACCGGTGGTCGGCGGACAACAAGTAGAATATCGGTGTGTTGATCGCAC
CATCTCGAAGGGTGGACGCT

Downstream 100 bases:

>100_bases
CCGGCAACCGGCCATCGTCAGATAGCCACGGCCGCAGCCGGTTTCGGCTCCGCCGGCTCGCAGCATCCGTTGCCGTCACC
GAAACACATTGACCCCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MRRAGRYLFVMVAITVMALVAPVGRGGASVPLPQPVPGIASILPANGAVVGVAHPIVVTFTAPAADRAAVERSIHVVSPA
GVRGHFEWADDNTVVRFVPNRYWPAHGHVSVGVQALTTGFDTGDALLGVASISKHTFTVSRNGEVLRTMPASMGKPSRPT
PIGNFTALEKQRSVVMDSRTIGIPLSSPEGYKITAQYAVRVTWSGVYVHSAPWSVDSQGYANVSHGYINLSPDNAAWYFN
EVNVGDPIQVVA

Sequences:

>Translated_252_residues
MRRAGRYLFVMVAITVMALVAPVGRGGASVPLPQPVPGIASILPANGAVVGVAHPIVVTFTAPAADRAAVERSIHVVSPA
GVRGHFEWADDNTVVRFVPNRYWPAHGHVSVGVQALTTGFDTGDALLGVASISKHTFTVSRNGEVLRTMPASMGKPSRPT
PIGNFTALEKQRSVVMDSRTIGIPLSSPEGYKITAQYAVRVTWSGVYVHSAPWSVDSQGYANVSHGYINLSPDNAAWYFN
EVNVGDPIQVVA
>Mature_252_residues
MRRAGRYLFVMVAITVMALVAPVGRGGASVPLPQPVPGIASILPANGAVVGVAHPIVVTFTAPAADRAAVERSIHVVSPA
GVRGHFEWADDNTVVRFVPNRYWPAHGHVSVGVQALTTGFDTGDALLGVASISKHTFTVSRNGEVLRTMPASMGKPSRPT
PIGNFTALEKQRSVVMDSRTIGIPLSSPEGYKITAQYAVRVTWSGVYVHSAPWSVDSQGYANVSHGYINLSPDNAAWYFN
EVNVGDPIQVVA

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 26737; Mature: 26737

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAGRYLFVMVAITVMALVAPVGRGGASVPLPQPVPGIASILPANGAVVGVAHPIVVTF
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECEEEEEE
TAPAADRAAVERSIHVVSPAGVRGHFEWADDNTVVRFVPNRYWPAHGHVSVGVQALTTGF
ECCCCHHHHHHCEEEEECCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEECEEEEECCC
DTGDALLGVASISKHTFTVSRNGEVLRTMPASMGKPSRPTPIGNFTALEKQRSVVMDSRT
CCCCCEEEEEECCCEEEEEECCCCEEEECCHHCCCCCCCCCCCCCHHHHHHHHEEECCCE
IGIPLSSPEGYKITAQYAVRVTWSGVYVHSAPWSVDSQGYANVSHGYINLSPDNAAWYFN
EEEECCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCEEECCCEEEECCCCCEEEEE
EVNVGDPIQVVA
ECCCCCCEEEEC
>Mature Secondary Structure
MRRAGRYLFVMVAITVMALVAPVGRGGASVPLPQPVPGIASILPANGAVVGVAHPIVVTF
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECEEEEEE
TAPAADRAAVERSIHVVSPAGVRGHFEWADDNTVVRFVPNRYWPAHGHVSVGVQALTTGF
ECCCCHHHHHHCEEEEECCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEECEEEEECCC
DTGDALLGVASISKHTFTVSRNGEVLRTMPASMGKPSRPTPIGNFTALEKQRSVVMDSRT
CCCCCEEEEEECCCEEEEEECCCCEEEECCHHCCCCCCCCCCCCCHHHHHHHHEEECCCE
IGIPLSSPEGYKITAQYAVRVTWSGVYVHSAPWSVDSQGYANVSHGYINLSPDNAAWYFN
EEEECCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCEEECCCEEEECCCCCEEEEE
EVNVGDPIQVVA
ECCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]