| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409567
Identifier: 41409567
GI number: 41409567
Start: 3854170
End: 3854757
Strand: Reverse
Name: 41409567
Synonym: MAP3469c
Alternate gene names: NA
Gene position: 3854757-3854170 (Counterclockwise)
Preceding gene: 41409568
Following gene: 41409566
Centisome position: 79.81
GC content: 70.07
Gene sequence:
>588_bases GTGGCTTACGCGCACTCTGACGTGCAGCTTGACTCCGGCGACCACGCGTCGACCAAGATCGTGATCGCCGGCGGATTCGG CGCCGGCAAGACCACGTTCGTCGGGGCGGTGTCGGAGATCATGCCGCTGCGCACCGAGGCCATGCTCACCGACGCCTCGA CCGGCGTGGACGCGCTGGAGGCCACGCCCGACAAGCGGACCACCACGGTGGCGATGGACTTCGGCCGGATCACCCTGGCC GACGATCTGGTGCTGTACCTGTTCGGCACGCCGGGGCAGCGCCGGTTCTGGTTCATGTGGGACGACCTGGTGCGCGGCGC GATCGGCGCGGTGGTGCTGGTCGACTGCCGGCGGCTGCAGGACAGCTTCGCCGCCGTGGACTTCTTCGAGCACCGCAACC TGCCGTTCCTGGTCGCGGTCAACGAGTTCGACGGGGCGCCCCGCTACCCGGTCGAGGAGGTGCGCGAGGCGCTGACGCTG CCGCCGCACATCCCGGTGATCACCGTCGATGCCAGGGACCGCCGGTCGGCGACCGACGCCCTGATCGCGGTCAGCGAGTA CGCGCTGGCCAGCCTGTCGGCCAATTGA
Upstream 100 bases:
>100_bases GTCGGCGATCTGGTGTTGTCCGGCTACCTTCGGGTGCACAAGACGTTGTCCGAGCGTTCGACCAGGGATGAGCGCCACGA ACTGATAGGAAGGACCCTGC
Downstream 100 bases:
>100_bases CCGCGTGGGTCGACCGCGAATTCGAGCGGCACGATTTCACCGACGAGGACCTGGTCGGGCTGTCGACCGAGCGGGTGGTG TTCACCGAATGCAATTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MAYAHSDVQLDSGDHASTKIVIAGGFGAGKTTFVGAVSEIMPLRTEAMLTDASTGVDALEATPDKRTTTVAMDFGRITLA DDLVLYLFGTPGQRRFWFMWDDLVRGAIGAVVLVDCRRLQDSFAAVDFFEHRNLPFLVAVNEFDGAPRYPVEEVREALTL PPHIPVITVDARDRRSATDALIAVSEYALASLSAN
Sequences:
>Translated_195_residues MAYAHSDVQLDSGDHASTKIVIAGGFGAGKTTFVGAVSEIMPLRTEAMLTDASTGVDALEATPDKRTTTVAMDFGRITLA DDLVLYLFGTPGQRRFWFMWDDLVRGAIGAVVLVDCRRLQDSFAAVDFFEHRNLPFLVAVNEFDGAPRYPVEEVREALTL PPHIPVITVDARDRRSATDALIAVSEYALASLSAN >Mature_194_residues AYAHSDVQLDSGDHASTKIVIAGGFGAGKTTFVGAVSEIMPLRTEAMLTDASTGVDALEATPDKRTTTVAMDFGRITLAD DLVLYLFGTPGQRRFWFMWDDLVRGAIGAVVLVDCRRLQDSFAAVDFFEHRNLPFLVAVNEFDGAPRYPVEEVREALTLP PHIPVITVDARDRRSATDALIAVSEYALASLSAN
Specific function: Unknown
COG id: COG2229
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21178; Mature: 21047
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYAHSDVQLDSGDHASTKIVIAGGFGAGKTTFVGAVSEIMPLRTEAMLTDASTGVDALE CCCCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHEEECCCCCCCHHH ATPDKRTTTVAMDFGRITLADDLVLYLFGTPGQRRFWFMWDDLVRGAIGAVVLVDCRRLQ CCCCCCEEEEEEECCEEEEECCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH DSFAAVDFFEHRNLPFLVAVNEFDGAPRYPVEEVREALTLPPHIPVITVDARDRRSATDA HHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCHHHH LIAVSEYALASLSAN HHHHHHHHHHHCCCC >Mature Secondary Structure AYAHSDVQLDSGDHASTKIVIAGGFGAGKTTFVGAVSEIMPLRTEAMLTDASTGVDALE CCCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHEEECCCCCCCHHH ATPDKRTTTVAMDFGRITLADDLVLYLFGTPGQRRFWFMWDDLVRGAIGAVVLVDCRRLQ CCCCCCEEEEEEECCEEEEECCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH DSFAAVDFFEHRNLPFLVAVNEFDGAPRYPVEEVREALTLPPHIPVITVDARDRRSATDA HHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCHHHH LIAVSEYALASLSAN HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA