| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is folD
Identifier: 41409561
GI number: 41409561
Start: 3844745
End: 3845590
Strand: Reverse
Name: folD
Synonym: MAP3463c
Alternate gene names: 41409561
Gene position: 3845590-3844745 (Counterclockwise)
Preceding gene: 41409565
Following gene: 41409560
Centisome position: 79.62
GC content: 70.45
Gene sequence:
>846_bases GTGGGAGCAATCACACTGGACGGCAAGGCCACCCGCGACGAAATCTTCGTCGACCTCAAGCAGCGGGTCGCCGCGTTGAC CGCGGCCGGCCGCACCCCCGGTTTGGGCACCATCCTGGTCGGCGACGACCCGGGCTCGCAGGCCTACGTGCGCGGCAAGC ACGCCGACTGCGCCAAGGTGGGCATCACCTCGATCCGCCGCGACCTGCCCGCCGACATCAGCACCGCCGCGCTCAACGAC ACCATCGACGAGCTGAACGCCAACCCCGAATGCACGGGGTACATCGTGCAGTTGCCGCTGCCCAAGCAGTTGGACGAGAA CGCGGCGCTGGAGCGGGTGGACCCGGACAAGGACGCCGACGGCCTGCACCCCACCAACCTGGGCCGGTTGGTGCTCAACA ATCCGGCGCCGCTGCCGTGCACGCCGCGCGGAATCGTGCACCTGTTGCGCCGCTACGACGCCGAGATCGCCGGGGCGCAC GTGGTGGTCATCGGCCGCGGTGTGACGGTCGGTCGTCCGCTGGGGCTGCTGCTGACCCGGCGTTCGGAGAACGCGACGGT TACGTTGTGCCACACCGGAACTCGTGATCTGCCGGCGTTGACCAGGCAGGCCGACATCATCGTGGCCGCCGTCGGGGTTC CGCACCTGCTGACCGCCGACATGGTGCGCCCGGGGGCCGCGGTGCTCGACGTGGGGGTCAGCCGGGTGGACGGCAAGCTC GCCGGCGACGTGCACCCCGACGTGTGGGAGGTGGCCGGTCACGTGTCGCCGAATCCCGGCGGCGTGGGCCCGTTGACCCG GGCGTTCCTGTTGACCAACGTCGTCGAGCTGGCCGAGCGGGAATGA
Upstream 100 bases:
>100_bases GACTTGATGATGCGATTGCGCAGCGTGATCGGACCGAGCTTGGCGGGGCTGAACACGTCCGGAGGGGTGGGCATATCGGG GAGCGTGCCAGACTGTCAGC
Downstream 100 bases:
>100_bases CCGCACGCACCCTGATGCGGGCCCAGTGGCCGATTCTGTTGGTGGGCTTGATCTTTGCGGTGGCACTGGCCTTGGTGGGC GCCAACTTCTGGCGCCGCGG
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MGAITLDGKATRDEIFVDLKQRVAALTAAGRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTAALND TIDELNANPECTGYIVQLPLPKQLDENAALERVDPDKDADGLHPTNLGRLVLNNPAPLPCTPRGIVHLLRRYDAEIAGAH VVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPALTRQADIIVAAVGVPHLLTADMVRPGAAVLDVGVSRVDGKL AGDVHPDVWEVAGHVSPNPGGVGPLTRAFLLTNVVELAERE
Sequences:
>Translated_281_residues MGAITLDGKATRDEIFVDLKQRVAALTAAGRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTAALND TIDELNANPECTGYIVQLPLPKQLDENAALERVDPDKDADGLHPTNLGRLVLNNPAPLPCTPRGIVHLLRRYDAEIAGAH VVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPALTRQADIIVAAVGVPHLLTADMVRPGAAVLDVGVSRVDGKL AGDVHPDVWEVAGHVSPNPGGVGPLTRAFLLTNVVELAERE >Mature_280_residues GAITLDGKATRDEIFVDLKQRVAALTAAGRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTAALNDT IDELNANPECTGYIVQLPLPKQLDENAALERVDPDKDADGLHPTNLGRLVLNNPAPLPCTPRGIVHLLRRYDAEIAGAHV VVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPALTRQADIIVAAVGVPHLLTADMVRPGAAVLDVGVSRVDGKLA GDVHPDVWEVAGHVSPNPGGVGPLTRAFLLTNVVELAERE
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222418558, Length=294, Percent_Identity=39.7959183673469, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI94721354, Length=302, Percent_Identity=40.3973509933775, Blast_Score=185, Evalue=4e-47, Organism=Homo sapiens, GI222136639, Length=289, Percent_Identity=35.2941176470588, Blast_Score=157, Evalue=9e-39, Organism=Homo sapiens, GI36796743, Length=210, Percent_Identity=28.0952380952381, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1786741, Length=279, Percent_Identity=44.0860215053763, Blast_Score=216, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17568735, Length=258, Percent_Identity=36.046511627907, Blast_Score=146, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6319558, Length=259, Percent_Identity=39.7683397683398, Blast_Score=176, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6321643, Length=301, Percent_Identity=36.2126245847176, Blast_Score=171, Evalue=1e-43, Organism=Drosophila melanogaster, GI17136816, Length=295, Percent_Identity=41.6949152542373, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI17136818, Length=295, Percent_Identity=41.6949152542373, Blast_Score=215, Evalue=2e-56, Organism=Drosophila melanogaster, GI62472483, Length=292, Percent_Identity=41.0958904109589, Blast_Score=195, Evalue=3e-50, Organism=Drosophila melanogaster, GI45551871, Length=292, Percent_Identity=41.0958904109589, Blast_Score=195, Evalue=3e-50, Organism=Drosophila melanogaster, GI24645718, Length=292, Percent_Identity=41.0958904109589, Blast_Score=194, Evalue=4e-50, Organism=Drosophila melanogaster, GI17137370, Length=292, Percent_Identity=41.0958904109589, Blast_Score=194, Evalue=4e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 29539; Mature: 29408
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAITLDGKATRDEIFVDLKQRVAALTAAGRTPGLGTILVGDDPGSQAYVRGKHADCAKV CCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECCCCCHHHH GITSIRRDLPADISTAALNDTIDELNANPECTGYIVQLPLPKQLDENAALERVDPDKDAD HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCCCCCC GLHPTNLGRLVLNNPAPLPCTPRGIVHLLRRYDAEIAGAHVVVIGRGVTVGRPLGLLLTR CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCHHHCCCEEEEEECCCCCCCCCEEEEEE RSENATVTLCHTGTRDLPALTRQADIIVAAVGVPHLLTADMVRPGAAVLDVGVSRVDGKL CCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCHHHHHHHCCCCHHEEHHCHHHCCCEE AGDVHPDVWEVAGHVSPNPGGVGPLTRAFLLTNVVELAERE CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GAITLDGKATRDEIFVDLKQRVAALTAAGRTPGLGTILVGDDPGSQAYVRGKHADCAKV CEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECCCCCHHHH GITSIRRDLPADISTAALNDTIDELNANPECTGYIVQLPLPKQLDENAALERVDPDKDAD HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCCCCCC GLHPTNLGRLVLNNPAPLPCTPRGIVHLLRRYDAEIAGAHVVVIGRGVTVGRPLGLLLTR CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCHHHCCCEEEEEECCCCCCCCCEEEEEE RSENATVTLCHTGTRDLPALTRQADIIVAAVGVPHLLTADMVRPGAAVLDVGVSRVDGKL CCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCHHHHHHHCCCCHHEEHHCHHHCCCEE AGDVHPDVWEVAGHVSPNPGGVGPLTRAFLLTNVVELAERE CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA