| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409531
Identifier: 41409531
GI number: 41409531
Start: 3812418
End: 3813731
Strand: Direct
Name: 41409531
Synonym: MAP3433
Alternate gene names: NA
Gene position: 3812418-3813731 (Clockwise)
Preceding gene: 41409530
Following gene: 41409532
Centisome position: 78.94
GC content: 69.94
Gene sequence:
>1314_bases ATGGCTGCTGACCTCGTGCCCATCCGCTTGAGCCTGTCCGCCGGCGACCGCTACACGGTGTGGGCGCCGCGCTGGCGTGA CTCCGGCGACGAGTGGGAAGCCTTCCTGGGCAAGGACGAGGATCTGTACGTCTTCTCCTCGGTCGCCGACCTGGTGGCCT TCGTGCGCTCGGACGAGGACAACGACCTGACCGACCATCCGGCGTGGACGCGGCTGCGCACGGCGCACGCGCACAAGTTC GAGCCCGCGAAGGACAAGCAGTTCGATCTGGTCGCGGTCGAGGAGCTGGTGTCGGAGAAGCCGACCGAGGAGTCGGTGAC CGCGCTGGCCGGCGTCCTGGCCATCGTGTCGTCCATCGGGTCGGTGTGCGAGCTGGCTGCGGTGTCGAAGTTCTTCAACG GCAACCCGGCCCTGGGCACCGTGTCCGGCGGGATCGAGCACTTCACCGGCAAGGCCGGCGCCAAACGCTGGCATGCGATC GCCGAGATCATCGCGCGCGGCTGGGACGACGTGCTCGGCGCGATCGACGACATCGCCACCACCCCCGAAGTCGACGAGGC GTTGTCGGCCAAGGCCGAAGACGAGCTGGCCGAGGAGCGCGACGACGAGGAGACCGACGAGGCGGACGAGGCCGCCGAGG CGCCGGCCGACGCGACCGAGCCGGACGAGGAGGCCCTCGAGGCCGACGAGGCCGACGGCGAACCGGACGACGACGCCGAC GAAACCGAGACCCGCGCGGCCGGCGACACCGTGGTGCTCGGCGGCGACAAGGACTTCTGGCTGCAGGTCGGCATCGACCC GATCCGCATCATCACCGGCTCGGGTACCTTCTACACGCTGCGCTGCTACCTGGACGACCAACCGATCTTCCTGGGCCGCA ACGGACGTATCAGCGTCTTCACCTCCGAGCGCGCGCTGGCCCGCTACCTGGCCGACGAGCACGACCACGACCTGGCCGAC CTGAGCACCTACGACGACATCCGCACCGCCGCCACCGACGGCTCGCTGGAGGTCGAGATCACCGACGACAACATCTATGT GCTCAGCGGGCTGGCCGACGACCTGGCCGACGGGCCGGACGCGGTGGATCGCGACCAACTGGAGCTGGCCGTCGAGGTGC TGCGCGACATCGGCGACTACTCCGAGGATTCCACCGTCGACAAGGCCCTCGAGCCCGGCCGGCCGCTGGGCAAGCTGGTG GCCGCCGTGCTCGAGCCCGGCTCGGTGGCCAAGCCGTCGCCGCCGTATGCCGCAGCGGTGCGCGAGTGGGAGAAGCTGGA GCAATTCGTCGACGGCCGGCTGCGCCGCGGATAG
Upstream 100 bases:
>100_bases CTCGAGCAGATGTACGGGCTGCCCAAGACGGGCTATGCCGCCGGCGCCGCCCCCATCACCGACATCTGGGGCTGAGCACC AGGTCGCTATTCTGTGCCGC
Downstream 100 bases:
>100_bases CCCGCTGCGTTTGACGGGCTAGGTTGGGTGTCGTGTCGCTTCCCGGTATCGGCCCGTTGCCCCTCTACGGGTTCCAGCGT CCGGGCATGCTGCTGTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MAADLVPIRLSLSAGDRYTVWAPRWRDSGDEWEAFLGKDEDLYVFSSVADLVAFVRSDEDNDLTDHPAWTRLRTAHAHKF EPAKDKQFDLVAVEELVSEKPTEESVTALAGVLAIVSSIGSVCELAAVSKFFNGNPALGTVSGGIEHFTGKAGAKRWHAI AEIIARGWDDVLGAIDDIATTPEVDEALSAKAEDELAEERDDEETDEADEAAEAPADATEPDEEALEADEADGEPDDDAD ETETRAAGDTVVLGGDKDFWLQVGIDPIRIITGSGTFYTLRCYLDDQPIFLGRNGRISVFTSERALARYLADEHDHDLAD LSTYDDIRTAATDGSLEVEITDDNIYVLSGLADDLADGPDAVDRDQLELAVEVLRDIGDYSEDSTVDKALEPGRPLGKLV AAVLEPGSVAKPSPPYAAAVREWEKLEQFVDGRLRRG
Sequences:
>Translated_437_residues MAADLVPIRLSLSAGDRYTVWAPRWRDSGDEWEAFLGKDEDLYVFSSVADLVAFVRSDEDNDLTDHPAWTRLRTAHAHKF EPAKDKQFDLVAVEELVSEKPTEESVTALAGVLAIVSSIGSVCELAAVSKFFNGNPALGTVSGGIEHFTGKAGAKRWHAI AEIIARGWDDVLGAIDDIATTPEVDEALSAKAEDELAEERDDEETDEADEAAEAPADATEPDEEALEADEADGEPDDDAD ETETRAAGDTVVLGGDKDFWLQVGIDPIRIITGSGTFYTLRCYLDDQPIFLGRNGRISVFTSERALARYLADEHDHDLAD LSTYDDIRTAATDGSLEVEITDDNIYVLSGLADDLADGPDAVDRDQLELAVEVLRDIGDYSEDSTVDKALEPGRPLGKLV AAVLEPGSVAKPSPPYAAAVREWEKLEQFVDGRLRRG >Mature_436_residues AADLVPIRLSLSAGDRYTVWAPRWRDSGDEWEAFLGKDEDLYVFSSVADLVAFVRSDEDNDLTDHPAWTRLRTAHAHKFE PAKDKQFDLVAVEELVSEKPTEESVTALAGVLAIVSSIGSVCELAAVSKFFNGNPALGTVSGGIEHFTGKAGAKRWHAIA EIIARGWDDVLGAIDDIATTPEVDEALSAKAEDELAEERDDEETDEADEAAEAPADATEPDEEALEADEADGEPDDDADE TETRAAGDTVVLGGDKDFWLQVGIDPIRIITGSGTFYTLRCYLDDQPIFLGRNGRISVFTSERALARYLADEHDHDLADL STYDDIRTAATDGSLEVEITDDNIYVLSGLADDLADGPDAVDRDQLELAVEVLRDIGDYSEDSTVDKALEPGRPLGKLVA AVLEPGSVAKPSPPYAAAVREWEKLEQFVDGRLRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47440; Mature: 47309
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADLVPIRLSLSAGDRYTVWAPRWRDSGDEWEAFLGKDEDLYVFSSVADLVAFVRSDED CCCCEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHCCCC NDLTDHPAWTRLRTAHAHKFEPAKDKQFDLVAVEELVSEKPTEESVTALAGVLAIVSSIG CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SVCELAAVSKFFNGNPALGTVSGGIEHFTGKAGAKRWHAIAEIIARGWDDVLGAIDDIAT HHHHHHHHHHHHCCCCCCEECCCCHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCC TPEVDEALSAKAEDELAEERDDEETDEADEAAEAPADATEPDEEALEADEADGEPDDDAD CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCC ETETRAAGDTVVLGGDKDFWLQVGIDPIRIITGSGTFYTLRCYLDDQPIFLGRNGRISVF HHHHHCCCCEEEECCCCCEEEEECCCEEEEEECCCCEEEEEEEECCCCEEECCCCEEEEE TSERALARYLADEHDHDLADLSTYDDIRTAATDGSLEVEITDDNIYVLSGLADDLADGPD ECHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCHHHHCCCCC AVDRDQLELAVEVLRDIGDYSEDSTVDKALEPGRPLGKLVAAVLEPGSVAKPSPPYAAAV CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHH REWEKLEQFVDGRLRRG HHHHHHHHHHHHHCCCC >Mature Secondary Structure AADLVPIRLSLSAGDRYTVWAPRWRDSGDEWEAFLGKDEDLYVFSSVADLVAFVRSDED CCCEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHCCCC NDLTDHPAWTRLRTAHAHKFEPAKDKQFDLVAVEELVSEKPTEESVTALAGVLAIVSSIG CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SVCELAAVSKFFNGNPALGTVSGGIEHFTGKAGAKRWHAIAEIIARGWDDVLGAIDDIAT HHHHHHHHHHHHCCCCCCEECCCCHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCC TPEVDEALSAKAEDELAEERDDEETDEADEAAEAPADATEPDEEALEADEADGEPDDDAD CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCC ETETRAAGDTVVLGGDKDFWLQVGIDPIRIITGSGTFYTLRCYLDDQPIFLGRNGRISVF HHHHHCCCCEEEECCCCCEEEEECCCEEEEEECCCCEEEEEEEECCCCEEECCCCEEEEE TSERALARYLADEHDHDLADLSTYDDIRTAATDGSLEVEITDDNIYVLSGLADDLADGPD ECHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCHHHHCCCCC AVDRDQLELAVEVLRDIGDYSEDSTVDKALEPGRPLGKLVAAVLEPGSVAKPSPPYAAAV CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHH REWEKLEQFVDGRLRRG HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA