Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409516

Identifier: 41409516

GI number: 41409516

Start: 3796027

End: 3796476

Strand: Direct

Name: 41409516

Synonym: MAP3418

Alternate gene names: NA

Gene position: 3796027-3796476 (Clockwise)

Preceding gene: 41409514

Following gene: 41409523

Centisome position: 78.6

GC content: 67.78

Gene sequence:

>450_bases
GTGATACGGCAGCCGGTGCCGCCGCGACATGCGAGCATTCGACCTAGCCCCGCCTCCAGCAAGCAACGGCACTTCTGTTC
CACGGGAGTATCACAAATGACGAGCACCCAGATACGCAAGCGCGCCCGGCCGCGGTCGCTGGTGGTCGCCGGCCTGCTGC
CGCTGGCCGGCCTCCTCGGCGTGATCACGACGCCGGCGCACGCCACCTCGGCCGACGACGCGTTCCTGGCCGCGCTGAAG
GCCAAGGGCATCAACTACGAGTCCCCCGACGCCGCGGTCAACTCCGGCCACACCGTGTGCCACGAACTCGACATGGGCCA
GACCCCCGAGCAGGTCGCCAACAACGTGCTGTCCAGCAGCACCCTGGACAGCTATCACGCCGGCTATTTCGTGGGCGTCA
GCATCAAGGCGTACTGCCCGAAGTATGCGGCGGCGGCAGCCGGATCCTGA

Upstream 100 bases:

>100_bases
GCCATCTCGTCAGATCACCGGCGCCGCGTCGAGCAGGGCCCGCAGGTGACGCGCGGTCGACGACGGAGCAAACCCTGGTG
TGGCACGCACCGCATTATCG

Downstream 100 bases:

>100_bases
AATTTACAGCCGGTTGACAGGCTCGTGACGAAACCGCGGATAAAATCTGAACATCCGAATTCAGGTGACGAAGCGCAGAG
CCACGATGATTCCGAGACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MIRQPVPPRHASIRPSPASSKQRHFCSTGVSQMTSTQIRKRARPRSLVVAGLLPLAGLLGVITTPAHATSADDAFLAALK
AKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSSTLDSYHAGYFVGVSIKAYCPKYAAAAAGS

Sequences:

>Translated_149_residues
MIRQPVPPRHASIRPSPASSKQRHFCSTGVSQMTSTQIRKRARPRSLVVAGLLPLAGLLGVITTPAHATSADDAFLAALK
AKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSSTLDSYHAGYFVGVSIKAYCPKYAAAAAGS
>Mature_149_residues
MIRQPVPPRHASIRPSPASSKQRHFCSTGVSQMTSTQIRKRARPRSLVVAGLLPLAGLLGVITTPAHATSADDAFLAALK
AKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSSTLDSYHAGYFVGVSIKAYCPKYAAAAAGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1291c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007969 [H]

Pfam domain/function: PF05305 DUF732 [H]

EC number: NA

Molecular weight: Translated: 15615; Mature: 15615

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRQPVPPRHASIRPSPASSKQRHFCSTGVSQMTSTQIRKRARPRSLVVAGLLPLAGLLG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VITTPAHATSADDAFLAALKAKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSS
HHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH
TLDSYHAGYFVGVSIKAYCPKYAAAAAGS
CCCHHCCCEEEEEEHHHHCCHHHHHCCCC
>Mature Secondary Structure
MIRQPVPPRHASIRPSPASSKQRHFCSTGVSQMTSTQIRKRARPRSLVVAGLLPLAGLLG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VITTPAHATSADDAFLAALKAKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSS
HHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH
TLDSYHAGYFVGVSIKAYCPKYAAAAAGS
CCCHHCCCEEEEEEHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]