| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409481
Identifier: 41409481
GI number: 41409481
Start: 3756903
End: 3757184
Strand: Direct
Name: 41409481
Synonym: MAP3383
Alternate gene names: NA
Gene position: 3756903-3757184 (Clockwise)
Preceding gene: 41409480
Following gene: 41409482
Centisome position: 77.79
GC content: 72.7
Gene sequence:
>282_bases ATGGCGGTCTACGGGCTGTTGGCGAAGGCGGCAGGGACGGTGGTCACCGGGTTGGTCGGCGTGACGGCCTACGAGGTGGT GCGCAAGGCCGTGGCCAAGGCGCCCCTGCACGAGACGGCCGTCAAGGGGGCCGAACTCGGACTGCGCGGCACCCGCAAGG CCGAGGAGGCCGCCGAGTCGGCGCGGCTCAAGCTGGCCGACGTGATGGCCGAGGCCCGCGAGCGCATCGGCGAGGAGACG CCCACGCCCTCGATCGCCGACACCCACGACCACGAGCACTGA
Upstream 100 bases:
>100_bases CCGCCTTCGGGCGGCCCGATACATATTGATATCGCTATATTTCAATGTTAACGTCGTGCGAGCATGGGCTGAACGCGCAC ACGACAGGAAGGTTGCGGCA
Downstream 100 bases:
>100_bases CCGCGCGTGATGAATCTCGCGTCGGTCCGCGCCATCGGCGACGAGGGCCTGACGAAAGACCCTGCGCTGCAAGTCATGTC GGATGCGGCCGGACGGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MAVYGLLAKAAGTVVTGLVGVTAYEVVRKAVAKAPLHETAVKGAELGLRGTRKAEEAAESARLKLADVMAEARERIGEET PTPSIADTHDHEH
Sequences:
>Translated_93_residues MAVYGLLAKAAGTVVTGLVGVTAYEVVRKAVAKAPLHETAVKGAELGLRGTRKAEEAAESARLKLADVMAEARERIGEET PTPSIADTHDHEH >Mature_92_residues AVYGLLAKAAGTVVTGLVGVTAYEVVRKAVAKAPLHETAVKGAELGLRGTRKAEEAAESARLKLADVMAEARERIGEETP TPSIADTHDHEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1991c and Rv3269 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009963 - ProDom: PD020015 [H]
Pfam domain/function: PF07371 DUF1490 [H]
EC number: NA
Molecular weight: Translated: 9760; Mature: 9629
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVYGLLAKAAGTVVTGLVGVTAYEVVRKAVAKAPLHETAVKGAELGLRGTRKAEEAAES CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHH ARLKLADVMAEARERIGEETPTPSIADTHDHEH HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AVYGLLAKAAGTVVTGLVGVTAYEVVRKAVAKAPLHETAVKGAELGLRGTRKAEEAAES CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHH ARLKLADVMAEARERIGEETPTPSIADTHDHEH HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]