| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41409464
Identifier: 41409464
GI number: 41409464
Start: 3739998
End: 3741407
Strand: Direct
Name: 41409464
Synonym: MAP3366
Alternate gene names: NA
Gene position: 3739998-3741407 (Clockwise)
Preceding gene: 41409446
Following gene: 41409469
Centisome position: 77.44
GC content: 72.27
Gene sequence:
>1410_bases ATGCCGGACGGCAAAGCAAACGCGCGGGAGCACGCGCTGGTCATCGGGGGAAGCATCGCCGGCCTGTGCGCGGCGCGGGT GCTGTCGGAGTCGTATTCGGCGGTGACGGTCTGCGAGCGCGACGAGTTGCCGGCCGCGCCGGCCAGCCGGGCGACCGTCC CGCAGGACCGGCACCTGCACCTGCTGATGGCGCGCGGGGCGATCGAATTCGAGAAGCTGTTTCCCGGCCTGCTCGACGAT ATGACGGCCGCCGGCGTGCCCCGGCTGCACAACCGGCCCGAGTGCATCCATCTGGGCGCCGCCGGCCACGTGCTGGGCAC CGGGCAAACCCTGCGCGACGAGTTCACCGCCTACGTGCCCAGCCGTCCGCAGCTGGAATGGCAGCTGCGCAAACGGGTGC ACGCCATCGGCAACGTGACGGTGCTGCGCCGCTCGGTGGCCCAGCCGCGGTTCGACCCGGCGCGAGCGCGGGTGACCGGG GTGTGGCTGGACCCGGTCGCCGGCGGGTCCGCGGAGTTCGTCGCCGCCGATCTGGTGGTCGACGCGGCGGGGCGCGGCAC CCGATTGCCGGTGTGGTTGTCGCAGTGGGGTTTTCAGCGCCCACCCGAAGAGGTGATCGACATCGGCATCAACTACGCCA CCCAGCACTTCCACATCCCCGACGGGCTGATCGCCCAGAAGGTAGTGGTGGCCGGCGCCTCGCACGACGAGCCGCTGGGG CTGGGCATGCTGTGCTACGAGGACCGGGTCTGGGTGTTGACCACGTTCGGGGTGGCCGACGCCAAACCGCCCCGCACGTT CCCCGAAATGCTGACGCTGGCGCGCCGCTTGCTGCCCGCCCACTTCGGCGACGCGCTGGCCCGGGCCGAGCCGCTGGGCG ATCCCGCGTTTCACGCCTTTCCGGCCAGCCGGTGGCGCCGCTACGACAAGCTGGACCGCGTCCCGGCCGGCATCGTCGCC CTCGGCGATGCGGTGGCCAGCTTCAACCCCACCTTCGGCCAGGGGATGACGATGACCGCGCTGCAGGCCGGTCATCTGCG CCGCGCGCTGCGATGCCCCGACGACCGGCTGGCCGCGGCGCTGTACCGGGCCACCGCCAGGACCACCTTCCCGGTGTGGA CGATGAACGCCATCGGCGACGTCACCTTCCACCACGCCACCACCAAACGACCCGCCCCGTGGTGGTGGCGACCGTCGGGC GCGCTGTTCGACCAGTTCCTGGGCGCCGCCGAGACCGAACCCGTTCTGGCGGAATGGTTTCTGCGCCGGTTCTCGCTGCT GGACAGCCTCTACCTGATCCCGCCGCCCCGCATCGTCGGGCGCGCCGTCGGGCACAACATGCGGCTGTGGCTGGGGCAGC GCCGCCGGGCGGGCCGGCCGGGGACCGCTACAGCCCGACCGTCGCCCTGA
Upstream 100 bases:
>100_bases ACTGTTCCACCGACTTCGTCCGCCATCGACTGGCCATTCAACCGCCCTTTCCCAACGCTGGGAGCCATTGGTCCGTCACA GTACTGGGTAGTCTCCGCAG
Downstream 100 bases:
>100_bases ACAGCTTGGTGGGTTCGTGGGCGACCAGCCGGATCGGGGCATCGTCGGCGGCCACCCAGGCGGCCATGCCGCGCTTGAGC CGCAGCGAGCCGGATTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Monooxygenase; FAD Dependent Oxidoreductase; Hydroxylase; Oxygenase; Phytoene Dehydrogenase; Squalene Monooxygenase; Oxidoreductase; Monensin Epoxidase; Epoxidase; FAD Dependent Dehydrogenase
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MPDGKANAREHALVIGGSIAGLCAARVLSESYSAVTVCERDELPAAPASRATVPQDRHLHLLMARGAIEFEKLFPGLLDD MTAAGVPRLHNRPECIHLGAAGHVLGTGQTLRDEFTAYVPSRPQLEWQLRKRVHAIGNVTVLRRSVAQPRFDPARARVTG VWLDPVAGGSAEFVAADLVVDAAGRGTRLPVWLSQWGFQRPPEEVIDIGINYATQHFHIPDGLIAQKVVVAGASHDEPLG LGMLCYEDRVWVLTTFGVADAKPPRTFPEMLTLARRLLPAHFGDALARAEPLGDPAFHAFPASRWRRYDKLDRVPAGIVA LGDAVASFNPTFGQGMTMTALQAGHLRRALRCPDDRLAAALYRATARTTFPVWTMNAIGDVTFHHATTKRPAPWWWRPSG ALFDQFLGAAETEPVLAEWFLRRFSLLDSLYLIPPPRIVGRAVGHNMRLWLGQRRRAGRPGTATARPSP
Sequences:
>Translated_469_residues MPDGKANAREHALVIGGSIAGLCAARVLSESYSAVTVCERDELPAAPASRATVPQDRHLHLLMARGAIEFEKLFPGLLDD MTAAGVPRLHNRPECIHLGAAGHVLGTGQTLRDEFTAYVPSRPQLEWQLRKRVHAIGNVTVLRRSVAQPRFDPARARVTG VWLDPVAGGSAEFVAADLVVDAAGRGTRLPVWLSQWGFQRPPEEVIDIGINYATQHFHIPDGLIAQKVVVAGASHDEPLG LGMLCYEDRVWVLTTFGVADAKPPRTFPEMLTLARRLLPAHFGDALARAEPLGDPAFHAFPASRWRRYDKLDRVPAGIVA LGDAVASFNPTFGQGMTMTALQAGHLRRALRCPDDRLAAALYRATARTTFPVWTMNAIGDVTFHHATTKRPAPWWWRPSG ALFDQFLGAAETEPVLAEWFLRRFSLLDSLYLIPPPRIVGRAVGHNMRLWLGQRRRAGRPGTATARPSP >Mature_468_residues PDGKANAREHALVIGGSIAGLCAARVLSESYSAVTVCERDELPAAPASRATVPQDRHLHLLMARGAIEFEKLFPGLLDDM TAAGVPRLHNRPECIHLGAAGHVLGTGQTLRDEFTAYVPSRPQLEWQLRKRVHAIGNVTVLRRSVAQPRFDPARARVTGV WLDPVAGGSAEFVAADLVVDAAGRGTRLPVWLSQWGFQRPPEEVIDIGINYATQHFHIPDGLIAQKVVVAGASHDEPLGL GMLCYEDRVWVLTTFGVADAKPPRTFPEMLTLARRLLPAHFGDALARAEPLGDPAFHAFPASRWRRYDKLDRVPAGIVAL GDAVASFNPTFGQGMTMTALQAGHLRRALRCPDDRLAAALYRATARTTFPVWTMNAIGDVTFHHATTKRPAPWWWRPSGA LFDQFLGAAETEPVLAEWFLRRFSLLDSLYLIPPPRIVGRAVGHNMRLWLGQRRRAGRPGTATARPSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51421; Mature: 51289
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDGKANAREHALVIGGSIAGLCAARVLSESYSAVTVCERDELPAAPASRATVPQDRHLH CCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE LLMARGAIEFEKLFPGLLDDMTAAGVPRLHNRPECIHLGAAGHVLGTGQTLRDEFTAYVP EEEECCCHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCHHHHHHHEECC SRPQLEWQLRKRVHAIGNVTVLRRSVAQPRFDPARARVTGVWLDPVAGGSAEFVAADLVV CCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHEEEEEEE DAAGRGTRLPVWLSQWGFQRPPEEVIDIGINYATQHFHIPDGLIAQKVVVAGASHDEPLG ECCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHEECCCCCCCCC LGMLCYEDRVWVLTTFGVADAKPPRTFPEMLTLARRLLPAHFGDALARAEPLGDPAFHAF CEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC PASRWRRYDKLDRVPAGIVALGDAVASFNPTFGQGMTMTALQAGHLRRALRCPDDRLAAA CHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH LYRATARTTFPVWTMNAIGDVTFHHATTKRPAPWWWRPSGALFDQFLGAAETEPVLAEWF HHHHHCCCCCCEEEHHHHCCEEEECCCCCCCCCCEECCCHHHHHHHHCCCCCCHHHHHHH LRRFSLLDSLYLIPPPRIVGRAVGHNMRLWLGQRRRAGRPGTATARPSP HHHHHHHHCEECCCCHHHHHHHHCCCEEEEECHHHCCCCCCCCCCCCCC >Mature Secondary Structure PDGKANAREHALVIGGSIAGLCAARVLSESYSAVTVCERDELPAAPASRATVPQDRHLH CCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE LLMARGAIEFEKLFPGLLDDMTAAGVPRLHNRPECIHLGAAGHVLGTGQTLRDEFTAYVP EEEECCCHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCHHHHHHHEECC SRPQLEWQLRKRVHAIGNVTVLRRSVAQPRFDPARARVTGVWLDPVAGGSAEFVAADLVV CCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHEEEEEEE DAAGRGTRLPVWLSQWGFQRPPEEVIDIGINYATQHFHIPDGLIAQKVVVAGASHDEPLG ECCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHEECCCCCCCCC LGMLCYEDRVWVLTTFGVADAKPPRTFPEMLTLARRLLPAHFGDALARAEPLGDPAFHAF CEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC PASRWRRYDKLDRVPAGIVALGDAVASFNPTFGQGMTMTALQAGHLRRALRCPDDRLAAA CHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH LYRATARTTFPVWTMNAIGDVTFHHATTKRPAPWWWRPSGALFDQFLGAAETEPVLAEWF HHHHHCCCCCCEEEHHHHCCEEEECCCCCCCCCCEECCCHHHHHHHHCCCCCCHHHHHHH LRRFSLLDSLYLIPPPRIVGRAVGHNMRLWLGQRRRAGRPGTATARPSP HHHHHHHHCEECCCCHHHHHHHHCCCEEEEECHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA