Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409464

Identifier: 41409464

GI number: 41409464

Start: 3739998

End: 3741407

Strand: Direct

Name: 41409464

Synonym: MAP3366

Alternate gene names: NA

Gene position: 3739998-3741407 (Clockwise)

Preceding gene: 41409446

Following gene: 41409469

Centisome position: 77.44

GC content: 72.27

Gene sequence:

>1410_bases
ATGCCGGACGGCAAAGCAAACGCGCGGGAGCACGCGCTGGTCATCGGGGGAAGCATCGCCGGCCTGTGCGCGGCGCGGGT
GCTGTCGGAGTCGTATTCGGCGGTGACGGTCTGCGAGCGCGACGAGTTGCCGGCCGCGCCGGCCAGCCGGGCGACCGTCC
CGCAGGACCGGCACCTGCACCTGCTGATGGCGCGCGGGGCGATCGAATTCGAGAAGCTGTTTCCCGGCCTGCTCGACGAT
ATGACGGCCGCCGGCGTGCCCCGGCTGCACAACCGGCCCGAGTGCATCCATCTGGGCGCCGCCGGCCACGTGCTGGGCAC
CGGGCAAACCCTGCGCGACGAGTTCACCGCCTACGTGCCCAGCCGTCCGCAGCTGGAATGGCAGCTGCGCAAACGGGTGC
ACGCCATCGGCAACGTGACGGTGCTGCGCCGCTCGGTGGCCCAGCCGCGGTTCGACCCGGCGCGAGCGCGGGTGACCGGG
GTGTGGCTGGACCCGGTCGCCGGCGGGTCCGCGGAGTTCGTCGCCGCCGATCTGGTGGTCGACGCGGCGGGGCGCGGCAC
CCGATTGCCGGTGTGGTTGTCGCAGTGGGGTTTTCAGCGCCCACCCGAAGAGGTGATCGACATCGGCATCAACTACGCCA
CCCAGCACTTCCACATCCCCGACGGGCTGATCGCCCAGAAGGTAGTGGTGGCCGGCGCCTCGCACGACGAGCCGCTGGGG
CTGGGCATGCTGTGCTACGAGGACCGGGTCTGGGTGTTGACCACGTTCGGGGTGGCCGACGCCAAACCGCCCCGCACGTT
CCCCGAAATGCTGACGCTGGCGCGCCGCTTGCTGCCCGCCCACTTCGGCGACGCGCTGGCCCGGGCCGAGCCGCTGGGCG
ATCCCGCGTTTCACGCCTTTCCGGCCAGCCGGTGGCGCCGCTACGACAAGCTGGACCGCGTCCCGGCCGGCATCGTCGCC
CTCGGCGATGCGGTGGCCAGCTTCAACCCCACCTTCGGCCAGGGGATGACGATGACCGCGCTGCAGGCCGGTCATCTGCG
CCGCGCGCTGCGATGCCCCGACGACCGGCTGGCCGCGGCGCTGTACCGGGCCACCGCCAGGACCACCTTCCCGGTGTGGA
CGATGAACGCCATCGGCGACGTCACCTTCCACCACGCCACCACCAAACGACCCGCCCCGTGGTGGTGGCGACCGTCGGGC
GCGCTGTTCGACCAGTTCCTGGGCGCCGCCGAGACCGAACCCGTTCTGGCGGAATGGTTTCTGCGCCGGTTCTCGCTGCT
GGACAGCCTCTACCTGATCCCGCCGCCCCGCATCGTCGGGCGCGCCGTCGGGCACAACATGCGGCTGTGGCTGGGGCAGC
GCCGCCGGGCGGGCCGGCCGGGGACCGCTACAGCCCGACCGTCGCCCTGA

Upstream 100 bases:

>100_bases
ACTGTTCCACCGACTTCGTCCGCCATCGACTGGCCATTCAACCGCCCTTTCCCAACGCTGGGAGCCATTGGTCCGTCACA
GTACTGGGTAGTCTCCGCAG

Downstream 100 bases:

>100_bases
ACAGCTTGGTGGGTTCGTGGGCGACCAGCCGGATCGGGGCATCGTCGGCGGCCACCCAGGCGGCCATGCCGCGCTTGAGC
CGCAGCGAGCCGGATTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Monooxygenase; FAD Dependent Oxidoreductase; Hydroxylase; Oxygenase; Phytoene Dehydrogenase; Squalene Monooxygenase; Oxidoreductase; Monensin Epoxidase; Epoxidase; FAD Dependent Dehydrogenase

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MPDGKANAREHALVIGGSIAGLCAARVLSESYSAVTVCERDELPAAPASRATVPQDRHLHLLMARGAIEFEKLFPGLLDD
MTAAGVPRLHNRPECIHLGAAGHVLGTGQTLRDEFTAYVPSRPQLEWQLRKRVHAIGNVTVLRRSVAQPRFDPARARVTG
VWLDPVAGGSAEFVAADLVVDAAGRGTRLPVWLSQWGFQRPPEEVIDIGINYATQHFHIPDGLIAQKVVVAGASHDEPLG
LGMLCYEDRVWVLTTFGVADAKPPRTFPEMLTLARRLLPAHFGDALARAEPLGDPAFHAFPASRWRRYDKLDRVPAGIVA
LGDAVASFNPTFGQGMTMTALQAGHLRRALRCPDDRLAAALYRATARTTFPVWTMNAIGDVTFHHATTKRPAPWWWRPSG
ALFDQFLGAAETEPVLAEWFLRRFSLLDSLYLIPPPRIVGRAVGHNMRLWLGQRRRAGRPGTATARPSP

Sequences:

>Translated_469_residues
MPDGKANAREHALVIGGSIAGLCAARVLSESYSAVTVCERDELPAAPASRATVPQDRHLHLLMARGAIEFEKLFPGLLDD
MTAAGVPRLHNRPECIHLGAAGHVLGTGQTLRDEFTAYVPSRPQLEWQLRKRVHAIGNVTVLRRSVAQPRFDPARARVTG
VWLDPVAGGSAEFVAADLVVDAAGRGTRLPVWLSQWGFQRPPEEVIDIGINYATQHFHIPDGLIAQKVVVAGASHDEPLG
LGMLCYEDRVWVLTTFGVADAKPPRTFPEMLTLARRLLPAHFGDALARAEPLGDPAFHAFPASRWRRYDKLDRVPAGIVA
LGDAVASFNPTFGQGMTMTALQAGHLRRALRCPDDRLAAALYRATARTTFPVWTMNAIGDVTFHHATTKRPAPWWWRPSG
ALFDQFLGAAETEPVLAEWFLRRFSLLDSLYLIPPPRIVGRAVGHNMRLWLGQRRRAGRPGTATARPSP
>Mature_468_residues
PDGKANAREHALVIGGSIAGLCAARVLSESYSAVTVCERDELPAAPASRATVPQDRHLHLLMARGAIEFEKLFPGLLDDM
TAAGVPRLHNRPECIHLGAAGHVLGTGQTLRDEFTAYVPSRPQLEWQLRKRVHAIGNVTVLRRSVAQPRFDPARARVTGV
WLDPVAGGSAEFVAADLVVDAAGRGTRLPVWLSQWGFQRPPEEVIDIGINYATQHFHIPDGLIAQKVVVAGASHDEPLGL
GMLCYEDRVWVLTTFGVADAKPPRTFPEMLTLARRLLPAHFGDALARAEPLGDPAFHAFPASRWRRYDKLDRVPAGIVAL
GDAVASFNPTFGQGMTMTALQAGHLRRALRCPDDRLAAALYRATARTTFPVWTMNAIGDVTFHHATTKRPAPWWWRPSGA
LFDQFLGAAETEPVLAEWFLRRFSLLDSLYLIPPPRIVGRAVGHNMRLWLGQRRRAGRPGTATARPSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51421; Mature: 51289

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDGKANAREHALVIGGSIAGLCAARVLSESYSAVTVCERDELPAAPASRATVPQDRHLH
CCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE
LLMARGAIEFEKLFPGLLDDMTAAGVPRLHNRPECIHLGAAGHVLGTGQTLRDEFTAYVP
EEEECCCHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCHHHHHHHEECC
SRPQLEWQLRKRVHAIGNVTVLRRSVAQPRFDPARARVTGVWLDPVAGGSAEFVAADLVV
CCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHEEEEEEE
DAAGRGTRLPVWLSQWGFQRPPEEVIDIGINYATQHFHIPDGLIAQKVVVAGASHDEPLG
ECCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHEECCCCCCCCC
LGMLCYEDRVWVLTTFGVADAKPPRTFPEMLTLARRLLPAHFGDALARAEPLGDPAFHAF
CEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
PASRWRRYDKLDRVPAGIVALGDAVASFNPTFGQGMTMTALQAGHLRRALRCPDDRLAAA
CHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
LYRATARTTFPVWTMNAIGDVTFHHATTKRPAPWWWRPSGALFDQFLGAAETEPVLAEWF
HHHHHCCCCCCEEEHHHHCCEEEECCCCCCCCCCEECCCHHHHHHHHCCCCCCHHHHHHH
LRRFSLLDSLYLIPPPRIVGRAVGHNMRLWLGQRRRAGRPGTATARPSP
HHHHHHHHCEECCCCHHHHHHHHCCCEEEEECHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PDGKANAREHALVIGGSIAGLCAARVLSESYSAVTVCERDELPAAPASRATVPQDRHLH
CCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEE
LLMARGAIEFEKLFPGLLDDMTAAGVPRLHNRPECIHLGAAGHVLGTGQTLRDEFTAYVP
EEEECCCHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCHHHHHHHEECC
SRPQLEWQLRKRVHAIGNVTVLRRSVAQPRFDPARARVTGVWLDPVAGGSAEFVAADLVV
CCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHEEEEEEE
DAAGRGTRLPVWLSQWGFQRPPEEVIDIGINYATQHFHIPDGLIAQKVVVAGASHDEPLG
ECCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHEECCCCCCCCC
LGMLCYEDRVWVLTTFGVADAKPPRTFPEMLTLARRLLPAHFGDALARAEPLGDPAFHAF
CEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
PASRWRRYDKLDRVPAGIVALGDAVASFNPTFGQGMTMTALQAGHLRRALRCPDDRLAAA
CHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
LYRATARTTFPVWTMNAIGDVTFHHATTKRPAPWWWRPSGALFDQFLGAAETEPVLAEWF
HHHHHCCCCCCEEEHHHHCCEEEECCCCCCCCCCEECCCHHHHHHHHCCCCCCHHHHHHH
LRRFSLLDSLYLIPPPRIVGRAVGHNMRLWLGQRRRAGRPGTATARPSP
HHHHHHHHCEECCCCHHHHHHHHCCCEEEEECHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA