Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409451

Identifier: 41409451

GI number: 41409451

Start: 3721967

End: 3722749

Strand: Reverse

Name: 41409451

Synonym: MAP3353c

Alternate gene names: NA

Gene position: 3722749-3721967 (Counterclockwise)

Preceding gene: 41409452

Following gene: 41409450

Centisome position: 77.08

GC content: 74.71

Gene sequence:

>783_bases
ATGCGCGGCGGCGGTGTCGGCGCCCACCATGCATGCATGACCACGACACGCACCCCTCTCGACGCCGCGACGGCCGTCCT
GGATGACCCGGCCCTGCCCGCCGGAGACGACGAACGGTTCGTCGGTTTCGGCGTGATGGGGCTGCCCTTCGGCAGCGGGC
ATTACCTGGCGCTGCGGCAGTTTCCGGCGACCTCGTTCTCGCCCGGCTACCGCTCGGTGTGGCACCGCGACCGCGACGGG
GTGTGGACCTTCTACGCCACCACCCCCGGCCCGCAGAGCTGTGCCCGCTACTTCGGCGCGGCGACCGCCCGCGACGCGGT
CCAATGCGACATCGACGTCGCCTGGGTTACCCCGTGGTCGCTGCTCGTCGAGATCCCGGGACTGCTCGCCTGGCGCATCG
AGCTGCGGGCCACCGTCGCCACCCGGCTGATGAGTGCGCTCGGCGCGCGGCTGCCGCAGCGGGCGTGGACCAGCCGGGCC
GTGCTGGCCGTGCTCGGTCGCGCGGCCGGCCCGCTGCTGCGGGCCGGCCGGGTCCGGCTCTGCGGAACGGTGCCCAACGG
TCAGCGCTTCATGCTCGCGCCCGCGCAGGTGTGGGCGGTGCACCACTCCCGGGCGGTGCTGGACGGCGCGGACCTGGGAC
CGGTCGGGCCGCTGCGACGCCAGGCCCGGCTGGCCGGTTTCCGGCCCCCGCAGCGCGGGGTGTTCGCGGTCGGCGGCGGG
CATTTCGAGAACTTCGACCCGGGCCGTCATCACGCCGCGCCGCGCACCGTCGCAATCGGGTGA

Upstream 100 bases:

>100_bases
AATTTCACGCTCGGGCGGGCGCGGGCCGGGGAGGCATACGCGCCGGGCCGCCGCGGGCGCTGCCGCCGCACGCCCTGTGC
CGAGTTGAGGCATTCGCCCC

Downstream 100 bases:

>100_bases
CCCCGCGCCGATCGGCTGGGCACAATGATGCTCATGGCGCAGGCCGTACTCCCGACGCGGGCGGAGCTGCTGGCGGCGCT
GTCGGTGGCGATCGACCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MRGGGVGAHHACMTTTRTPLDAATAVLDDPALPAGDDERFVGFGVMGLPFGSGHYLALRQFPATSFSPGYRSVWHRDRDG
VWTFYATTPGPQSCARYFGAATARDAVQCDIDVAWVTPWSLLVEIPGLLAWRIELRATVATRLMSALGARLPQRAWTSRA
VLAVLGRAAGPLLRAGRVRLCGTVPNGQRFMLAPAQVWAVHHSRAVLDGADLGPVGPLRRQARLAGFRPPQRGVFAVGGG
HFENFDPGRHHAAPRTVAIG

Sequences:

>Translated_260_residues
MRGGGVGAHHACMTTTRTPLDAATAVLDDPALPAGDDERFVGFGVMGLPFGSGHYLALRQFPATSFSPGYRSVWHRDRDG
VWTFYATTPGPQSCARYFGAATARDAVQCDIDVAWVTPWSLLVEIPGLLAWRIELRATVATRLMSALGARLPQRAWTSRA
VLAVLGRAAGPLLRAGRVRLCGTVPNGQRFMLAPAQVWAVHHSRAVLDGADLGPVGPLRRQARLAGFRPPQRGVFAVGGG
HFENFDPGRHHAAPRTVAIG
>Mature_260_residues
MRGGGVGAHHACMTTTRTPLDAATAVLDDPALPAGDDERFVGFGVMGLPFGSGHYLALRQFPATSFSPGYRSVWHRDRDG
VWTFYATTPGPQSCARYFGAATARDAVQCDIDVAWVTPWSLLVEIPGLLAWRIELRATVATRLMSALGARLPQRAWTSRA
VLAVLGRAAGPLLRAGRVRLCGTVPNGQRFMLAPAQVWAVHHSRAVLDGADLGPVGPLRRQARLAGFRPPQRGVFAVGGG
HFENFDPGRHHAAPRTVAIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27845; Mature: 27845

Theoretical pI: Translated: 11.43; Mature: 11.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGGVGAHHACMTTTRTPLDAATAVLDDPALPAGDDERFVGFGVMGLPFGSGHYLALRQ
CCCCCCCCCHHEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEE
FPATSFSPGYRSVWHRDRDGVWTFYATTPGPQSCARYFGAATARDAVQCDIDVAWVTPWS
CCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEEECHHH
LLVEIPGLLAWRIELRATVATRLMSALGARLPQRAWTSRAVLAVLGRAAGPLLRAGRVRL
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCCEEE
CGTVPNGQRFMLAPAQVWAVHHSRAVLDGADLGPVGPLRRQARLAGFRPPQRGVFAVGGG
EEECCCCCEEEEEHHHHEEECCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCC
HFENFDPGRHHAAPRTVAIG
CCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MRGGGVGAHHACMTTTRTPLDAATAVLDDPALPAGDDERFVGFGVMGLPFGSGHYLALRQ
CCCCCCCCCHHEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEE
FPATSFSPGYRSVWHRDRDGVWTFYATTPGPQSCARYFGAATARDAVQCDIDVAWVTPWS
CCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEEECHHH
LLVEIPGLLAWRIELRATVATRLMSALGARLPQRAWTSRAVLAVLGRAAGPLLRAGRVRL
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCCEEE
CGTVPNGQRFMLAPAQVWAVHHSRAVLDGADLGPVGPLRRQARLAGFRPPQRGVFAVGGG
EEECCCCCEEEEEHHHHEEECCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCC
HFENFDPGRHHAAPRTVAIG
CCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA