| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409451
Identifier: 41409451
GI number: 41409451
Start: 3721967
End: 3722749
Strand: Reverse
Name: 41409451
Synonym: MAP3353c
Alternate gene names: NA
Gene position: 3722749-3721967 (Counterclockwise)
Preceding gene: 41409452
Following gene: 41409450
Centisome position: 77.08
GC content: 74.71
Gene sequence:
>783_bases ATGCGCGGCGGCGGTGTCGGCGCCCACCATGCATGCATGACCACGACACGCACCCCTCTCGACGCCGCGACGGCCGTCCT GGATGACCCGGCCCTGCCCGCCGGAGACGACGAACGGTTCGTCGGTTTCGGCGTGATGGGGCTGCCCTTCGGCAGCGGGC ATTACCTGGCGCTGCGGCAGTTTCCGGCGACCTCGTTCTCGCCCGGCTACCGCTCGGTGTGGCACCGCGACCGCGACGGG GTGTGGACCTTCTACGCCACCACCCCCGGCCCGCAGAGCTGTGCCCGCTACTTCGGCGCGGCGACCGCCCGCGACGCGGT CCAATGCGACATCGACGTCGCCTGGGTTACCCCGTGGTCGCTGCTCGTCGAGATCCCGGGACTGCTCGCCTGGCGCATCG AGCTGCGGGCCACCGTCGCCACCCGGCTGATGAGTGCGCTCGGCGCGCGGCTGCCGCAGCGGGCGTGGACCAGCCGGGCC GTGCTGGCCGTGCTCGGTCGCGCGGCCGGCCCGCTGCTGCGGGCCGGCCGGGTCCGGCTCTGCGGAACGGTGCCCAACGG TCAGCGCTTCATGCTCGCGCCCGCGCAGGTGTGGGCGGTGCACCACTCCCGGGCGGTGCTGGACGGCGCGGACCTGGGAC CGGTCGGGCCGCTGCGACGCCAGGCCCGGCTGGCCGGTTTCCGGCCCCCGCAGCGCGGGGTGTTCGCGGTCGGCGGCGGG CATTTCGAGAACTTCGACCCGGGCCGTCATCACGCCGCGCCGCGCACCGTCGCAATCGGGTGA
Upstream 100 bases:
>100_bases AATTTCACGCTCGGGCGGGCGCGGGCCGGGGAGGCATACGCGCCGGGCCGCCGCGGGCGCTGCCGCCGCACGCCCTGTGC CGAGTTGAGGCATTCGCCCC
Downstream 100 bases:
>100_bases CCCCGCGCCGATCGGCTGGGCACAATGATGCTCATGGCGCAGGCCGTACTCCCGACGCGGGCGGAGCTGCTGGCGGCGCT GTCGGTGGCGATCGACCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRGGGVGAHHACMTTTRTPLDAATAVLDDPALPAGDDERFVGFGVMGLPFGSGHYLALRQFPATSFSPGYRSVWHRDRDG VWTFYATTPGPQSCARYFGAATARDAVQCDIDVAWVTPWSLLVEIPGLLAWRIELRATVATRLMSALGARLPQRAWTSRA VLAVLGRAAGPLLRAGRVRLCGTVPNGQRFMLAPAQVWAVHHSRAVLDGADLGPVGPLRRQARLAGFRPPQRGVFAVGGG HFENFDPGRHHAAPRTVAIG
Sequences:
>Translated_260_residues MRGGGVGAHHACMTTTRTPLDAATAVLDDPALPAGDDERFVGFGVMGLPFGSGHYLALRQFPATSFSPGYRSVWHRDRDG VWTFYATTPGPQSCARYFGAATARDAVQCDIDVAWVTPWSLLVEIPGLLAWRIELRATVATRLMSALGARLPQRAWTSRA VLAVLGRAAGPLLRAGRVRLCGTVPNGQRFMLAPAQVWAVHHSRAVLDGADLGPVGPLRRQARLAGFRPPQRGVFAVGGG HFENFDPGRHHAAPRTVAIG >Mature_260_residues MRGGGVGAHHACMTTTRTPLDAATAVLDDPALPAGDDERFVGFGVMGLPFGSGHYLALRQFPATSFSPGYRSVWHRDRDG VWTFYATTPGPQSCARYFGAATARDAVQCDIDVAWVTPWSLLVEIPGLLAWRIELRATVATRLMSALGARLPQRAWTSRA VLAVLGRAAGPLLRAGRVRLCGTVPNGQRFMLAPAQVWAVHHSRAVLDGADLGPVGPLRRQARLAGFRPPQRGVFAVGGG HFENFDPGRHHAAPRTVAIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27845; Mature: 27845
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGGGVGAHHACMTTTRTPLDAATAVLDDPALPAGDDERFVGFGVMGLPFGSGHYLALRQ CCCCCCCCCHHEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEE FPATSFSPGYRSVWHRDRDGVWTFYATTPGPQSCARYFGAATARDAVQCDIDVAWVTPWS CCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEEECHHH LLVEIPGLLAWRIELRATVATRLMSALGARLPQRAWTSRAVLAVLGRAAGPLLRAGRVRL HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCCEEE CGTVPNGQRFMLAPAQVWAVHHSRAVLDGADLGPVGPLRRQARLAGFRPPQRGVFAVGGG EEECCCCCEEEEEHHHHEEECCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCC HFENFDPGRHHAAPRTVAIG CCCCCCCCCCCCCCCEEECC >Mature Secondary Structure MRGGGVGAHHACMTTTRTPLDAATAVLDDPALPAGDDERFVGFGVMGLPFGSGHYLALRQ CCCCCCCCCHHEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEE FPATSFSPGYRSVWHRDRDGVWTFYATTPGPQSCARYFGAATARDAVQCDIDVAWVTPWS CCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEEECHHH LLVEIPGLLAWRIELRATVATRLMSALGARLPQRAWTSRAVLAVLGRAAGPLLRAGRVRL HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCCEEE CGTVPNGQRFMLAPAQVWAVHHSRAVLDGADLGPVGPLRRQARLAGFRPPQRGVFAVGGG EEECCCCCEEEEEHHHHEEECCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCC HFENFDPGRHHAAPRTVAIG CCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA