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The map label for this gene is paaE [C]

Identifier: 41409442

GI number: 41409442

Start: 3712986

End: 3714140

Strand: Reverse

Name: paaE [C]

Synonym: MAP3344c

Alternate gene names: 41409442

Gene position: 3714140-3712986 (Counterclockwise)

Preceding gene: 41409443

Following gene: 41409441

Centisome position: 76.9

GC content: 71.0

Gene sequence:

>1155_bases
ATGAGCAACACCATGAGCAAGACGACATCGCCCATCACCGCCAACCTCGGCGACACCAAGCGGCCCGTGGTCGCGGGGGC
GGAGCGGCACCCCGGCTGGCACGCGCTGCGCAAACTCGCCGCGCGCATCACCACGCCGCTGCTGCCCGACGACTACCTGC
ACCTGGCCAATCCGCTCTGGTCGGCGCGGGAGCTGCGCGGCCGCGTGGTCGACGTGCGCCGGGAGACCGAGGACTCCGCG
ACCCTGGTGATCAAACCGGGCTGGGGGTTCAACTTCGACTACCAGCCCGGCCAATACATCGGCATCGGACTGTTGATCGA
CGGGCGCTGGCGGTGGCGGTCGTACTCGCTGACCTCGAGCCCGGCGACGTCGGCGTCGGCGCGGACCGTGACCATCACCG
TCAAGGCGATGCCCGAGGGCTTCCTGTCGAGTCACCTGGTGGCCGGTGTCGAGCCGGGCACCGTGGTCCGGCTGGCGGCG
CCGCAGGGCAACTTCGTGCTGCCCGACCCGGCGCCCGCCTCGATCCTGTTCCTCACCGCCGGCTCCGGGATCACGCCGGT
GATGTCGATGCTGCGAACCCTGGTGCGCCGCAACCAGATTGGTGACATCGTCCACCTGCACTCGGCGCCCACCGAGGCCG
ACGTGATGTTCCGCGGCGAGCTGGCCGCCCTGGCGAACGAGCACCCCGGCTATCGCCTGCAGTTGCGGGAGACCCGCACC
CGCGGCCGGCTCGACCTGTCCCTGCTGGACCGCGAGGTGCCCGACTGGCGCGAGCGCCAGACCTGGGCCTGCGGTCCGGA
AGGGATGCTGAACGCCGCCGAGCGGGTATGGTCGGCCGCGGGCATCGGCGAGCAGTTGCATCTGGAGCGCTTCGCGGTGT
CCAAGGCCGCACCCGCCGGCGCCGGCGGCATGGTCACCTTCGCCAGGAGCGGGCGCAGCGTCGACGCCGACGCGGCGACG
TCGTTGATGGATGCGGGCGAAGCCGCCGGGGTGCAAATGCCCTTCGGCTGCCGGATGGGTATCTGTCAGTCGTGTGTGGT
CGGCCTGGTCGAGGGGCACGTCCGCGATCTGCGCACCGGCGCCGAACACGAGCCGGGGACCCGGGTGCAGACCTGCGTGT
CGGCCGCATCCGGGGATTGCGTGCTCGACATTTAA

Upstream 100 bases:

>100_bases
TGGCCGCGACGCCGAGGGTACGGTACCGTAGGTTACGGTACCGTAGCTTTTGGCTCTGGCGTTGACCGCACGCCGCAATC
GCGAGGCAGGAGCTTCCAAC

Downstream 100 bases:

>100_bases
AGGCTACTCACAGGTAACCTACGGCGTCGTAGGTTACGATAGCGTAGGTCTGGGACGGATGAACGGACCGAACAATACGA
CCGCAGGGAGATGACGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MSNTMSKTTSPITANLGDTKRPVVAGAERHPGWHALRKLAARITTPLLPDDYLHLANPLWSARELRGRVVDVRRETEDSA
TLVIKPGWGFNFDYQPGQYIGIGLLIDGRWRWRSYSLTSSPATSASARTVTITVKAMPEGFLSSHLVAGVEPGTVVRLAA
PQGNFVLPDPAPASILFLTAGSGITPVMSMLRTLVRRNQIGDIVHLHSAPTEADVMFRGELAALANEHPGYRLQLRETRT
RGRLDLSLLDREVPDWRERQTWACGPEGMLNAAERVWSAAGIGEQLHLERFAVSKAAPAGAGGMVTFARSGRSVDADAAT
SLMDAGEAAGVQMPFGCRMGICQSCVVGLVEGHVRDLRTGAEHEPGTRVQTCVSAASGDCVLDI

Sequences:

>Translated_384_residues
MSNTMSKTTSPITANLGDTKRPVVAGAERHPGWHALRKLAARITTPLLPDDYLHLANPLWSARELRGRVVDVRRETEDSA
TLVIKPGWGFNFDYQPGQYIGIGLLIDGRWRWRSYSLTSSPATSASARTVTITVKAMPEGFLSSHLVAGVEPGTVVRLAA
PQGNFVLPDPAPASILFLTAGSGITPVMSMLRTLVRRNQIGDIVHLHSAPTEADVMFRGELAALANEHPGYRLQLRETRT
RGRLDLSLLDREVPDWRERQTWACGPEGMLNAAERVWSAAGIGEQLHLERFAVSKAAPAGAGGMVTFARSGRSVDADAAT
SLMDAGEAAGVQMPFGCRMGICQSCVVGLVEGHVRDLRTGAEHEPGTRVQTCVSAASGDCVLDI
>Mature_383_residues
SNTMSKTTSPITANLGDTKRPVVAGAERHPGWHALRKLAARITTPLLPDDYLHLANPLWSARELRGRVVDVRRETEDSAT
LVIKPGWGFNFDYQPGQYIGIGLLIDGRWRWRSYSLTSSPATSASARTVTITVKAMPEGFLSSHLVAGVEPGTVVRLAAP
QGNFVLPDPAPASILFLTAGSGITPVMSMLRTLVRRNQIGDIVHLHSAPTEADVMFRGELAALANEHPGYRLQLRETRTR
GRLDLSLLDREVPDWRERQTWACGPEGMLNAAERVWSAAGIGEQLHLERFAVSKAAPAGAGGMVTFARSGRSVDADAATS
LMDAGEAAGVQMPFGCRMGICQSCVVGLVEGHVRDLRTGAEHEPGTRVQTCVSAASGDCVLDI

Specific function: This is an electron transfer partner for desA3 [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787658, Length=325, Percent_Identity=27.6923076923077, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787098, Length=298, Percent_Identity=29.1946308724832, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1788903, Length=218, Percent_Identity=28.8990825688073, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788104, Length=291, Percent_Identity=27.1477663230241, Blast_Score=69, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6323510, Length=192, Percent_Identity=26.0416666666667, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24655635, Length=261, Percent_Identity=28.735632183908, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41336; Mature: 41204

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTMSKTTSPITANLGDTKRPVVAGAERHPGWHALRKLAARITTPLLPDDYLHLANPLW
CCCCCCCCCCCEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCH
SARELRGRVVDVRRETEDSATLVIKPGWGFNFDYQPGQYIGIGLLIDGRWRWRSYSLTSS
HHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCC
PATSASARTVTITVKAMPEGFLSSHLVAGVEPGTVVRLAAPQGNFVLPDPAPASILFLTA
CCCCCCCEEEEEEEEECCCHHHHHHHEECCCCCCEEEEECCCCCEECCCCCCCEEEEEEC
GSGITPVMSMLRTLVRRNQIGDIVHLHSAPTEADVMFRGELAALANEHPGYRLQLRETRT
CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECCHHHHHHCCCCCEEEEEEECCC
RGRLDLSLLDREVPDWRERQTWACGPEGMLNAAERVWSAAGIGEQLHLERFAVSKAAPAG
CCCEEHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
AGGMVTFARSGRSVDADAATSLMDAGEAAGVQMPFGCRMGICQSCVVGLVEGHVRDLRTG
CCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
AEHEPGTRVQTCVSAASGDCVLDI
CCCCCCHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure 
SNTMSKTTSPITANLGDTKRPVVAGAERHPGWHALRKLAARITTPLLPDDYLHLANPLW
CCCCCCCCCCEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCH
SARELRGRVVDVRRETEDSATLVIKPGWGFNFDYQPGQYIGIGLLIDGRWRWRSYSLTSS
HHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCC
PATSASARTVTITVKAMPEGFLSSHLVAGVEPGTVVRLAAPQGNFVLPDPAPASILFLTA
CCCCCCCEEEEEEEEECCCHHHHHHHEECCCCCCEEEEECCCCCEECCCCCCCEEEEEEC
GSGITPVMSMLRTLVRRNQIGDIVHLHSAPTEADVMFRGELAALANEHPGYRLQLRETRT
CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECCHHHHHHCCCCCEEEEEEECCC
RGRLDLSLLDREVPDWRERQTWACGPEGMLNAAERVWSAAGIGEQLHLERFAVSKAAPAG
CCCEEHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
AGGMVTFARSGRSVDADAATSLMDAGEAAGVQMPFGCRMGICQSCVVGLVEGHVRDLRTG
CCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
AEHEPGTRVQTCVSAASGDCVLDI
CCCCCCHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]