Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409440

Identifier: 41409440

GI number: 41409440

Start: 3710625

End: 3711449

Strand: Direct

Name: 41409440

Synonym: MAP3342

Alternate gene names: NA

Gene position: 3710625-3711449 (Clockwise)

Preceding gene: 41409439

Following gene: 41409446

Centisome position: 76.83

GC content: 65.82

Gene sequence:

>825_bases
ATGACTGCCACCGGTATCGAAGGCTACCGAGCCTTCCTGGCGCGACGCGACGGCGAGGCCGACCTGCTCAACAGGCGACT
GGCCAATCGCGAGCAGTTCTTCACCCACATCGAAGCCAACCCGGTGCGCTCGGCGCGTCCCGCCGACCGAGCCACCTTCC
TGCGCAACCTGCGCCGCCGGAAACCCGAACCCGGCCTGGACGACAAGATGCTGTTCCTGCTGGCCACCGCGAAGCTCAAC
CAGGCCGAGCGATTCGGCGTCGGGCTCGGCGAAACCTACGGGCGCAACAGCGACGAAAGCCTGCCGCCCGAGAATGTCTA
TCTCGAACTCGAGGAGCACTATCACACTCGGCTGCTGGCGTACGCCCTGGACGTGTTCGACCTGACCTTTCAGGTGGTCC
CGCCGCCGTTCGTGATGCGCCAGTTCGTCAAGACCGGAGTGTTTCTTCCGGAACGGCTCGGCTTCATGTTCGTCGGAGCC
GCCGAGATGGCCGGCTGCATCCTGTTCGACGAACTACGCCGGGTCGGCAGTGCACTGTTCGCCGACGAGCCGCAGGTCGC
CGAGCGCATCGAACTGCTCTACAGCGAAATCCTCACCGACGAGATCGGGCACGTCGGCTACTGCGCCTCGCGCTGCAGCA
CCGCGGAGCGGGCGATCATGCGCCGCCTCTATCCGCTGATCGGTCGGCTGTTCGCGCGACAGACCGCCGAGATCAGCCTG
CTCGTCGACCCGAAAGCGTTGCGCGCCAGGCTCGACCGACCCTTCGACGTCGATGAACTCACCGCGGGGGTGGACAACGA
AACCTACCTCGTCGCCCACCCCTGA

Upstream 100 bases:

>100_bases
TCTTCCTCACCGGGCTGTTCGCGCTGCTGGCCACCGGCGCACACGACGGTGCGCTGTTAAGTCATTACGTGACGACGATT
GTCAAAGGGATGGAGAAACG

Downstream 100 bases:

>100_bases
CCACGGACTCGACGGCGGACCCTGCAAACAACGTCGCGCCGAGCGTGCACTGAGCGCGACAGATCGGCGAAATATTCGCC
GTGAGAACACGAAATATTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTATGIEGYRAFLARRDGEADLLNRRLANREQFFTHIEANPVRSARPADRATFLRNLRRRKPEPGLDDKMLFLLATAKLN
QAERFGVGLGETYGRNSDESLPPENVYLELEEHYHTRLLAYALDVFDLTFQVVPPPFVMRQFVKTGVFLPERLGFMFVGA
AEMAGCILFDELRRVGSALFADEPQVAERIELLYSEILTDEIGHVGYCASRCSTAERAIMRRLYPLIGRLFARQTAEISL
LVDPKALRARLDRPFDVDELTAGVDNETYLVAHP

Sequences:

>Translated_274_residues
MTATGIEGYRAFLARRDGEADLLNRRLANREQFFTHIEANPVRSARPADRATFLRNLRRRKPEPGLDDKMLFLLATAKLN
QAERFGVGLGETYGRNSDESLPPENVYLELEEHYHTRLLAYALDVFDLTFQVVPPPFVMRQFVKTGVFLPERLGFMFVGA
AEMAGCILFDELRRVGSALFADEPQVAERIELLYSEILTDEIGHVGYCASRCSTAERAIMRRLYPLIGRLFARQTAEISL
LVDPKALRARLDRPFDVDELTAGVDNETYLVAHP
>Mature_273_residues
TATGIEGYRAFLARRDGEADLLNRRLANREQFFTHIEANPVRSARPADRATFLRNLRRRKPEPGLDDKMLFLLATAKLNQ
AERFGVGLGETYGRNSDESLPPENVYLELEEHYHTRLLAYALDVFDLTFQVVPPPFVMRQFVKTGVFLPERLGFMFVGAA
EMAGCILFDELRRVGSALFADEPQVAERIELLYSEILTDEIGHVGYCASRCSTAERAIMRRLYPLIGRLFARQTAEISLL
VDPKALRARLDRPFDVDELTAGVDNETYLVAHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31097; Mature: 30966

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATGIEGYRAFLARRDGEADLLNRRLANREQFFTHIEANPVRSARPADRATFLRNLRRR
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC
KPEPGLDDKMLFLLATAKLNQAERFGVGLGETYGRNSDESLPPENVYLELEEHYHTRLLA
CCCCCCCHHHHHHHHHHHHCHHHHHCCCCCHHCCCCCCCCCCCCCEEEEEHHHHHHHHHH
YALDVFDLTFQVVPPPFVMRQFVKTGVFLPERLGFMFVGAAEMAGCILFDELRRVGSALF
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHH
ADEPQVAERIELLYSEILTDEIGHVGYCASRCSTAERAIMRRLYPLIGRLFARQTAEISL
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LVDPKALRARLDRPFDVDELTAGVDNETYLVAHP
EECCHHHHHHCCCCCCHHHHHCCCCCCEEEEECC
>Mature Secondary Structure 
TATGIEGYRAFLARRDGEADLLNRRLANREQFFTHIEANPVRSARPADRATFLRNLRRR
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC
KPEPGLDDKMLFLLATAKLNQAERFGVGLGETYGRNSDESLPPENVYLELEEHYHTRLLA
CCCCCCCHHHHHHHHHHHHCHHHHHCCCCCHHCCCCCCCCCCCCCEEEEEHHHHHHHHHH
YALDVFDLTFQVVPPPFVMRQFVKTGVFLPERLGFMFVGAAEMAGCILFDELRRVGSALF
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHH
ADEPQVAERIELLYSEILTDEIGHVGYCASRCSTAERAIMRRLYPLIGRLFARQTAEISL
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LVDPKALRARLDRPFDVDELTAGVDNETYLVAHP
EECCHHHHHHCCCCCCHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA