| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409440
Identifier: 41409440
GI number: 41409440
Start: 3710625
End: 3711449
Strand: Direct
Name: 41409440
Synonym: MAP3342
Alternate gene names: NA
Gene position: 3710625-3711449 (Clockwise)
Preceding gene: 41409439
Following gene: 41409446
Centisome position: 76.83
GC content: 65.82
Gene sequence:
>825_bases ATGACTGCCACCGGTATCGAAGGCTACCGAGCCTTCCTGGCGCGACGCGACGGCGAGGCCGACCTGCTCAACAGGCGACT GGCCAATCGCGAGCAGTTCTTCACCCACATCGAAGCCAACCCGGTGCGCTCGGCGCGTCCCGCCGACCGAGCCACCTTCC TGCGCAACCTGCGCCGCCGGAAACCCGAACCCGGCCTGGACGACAAGATGCTGTTCCTGCTGGCCACCGCGAAGCTCAAC CAGGCCGAGCGATTCGGCGTCGGGCTCGGCGAAACCTACGGGCGCAACAGCGACGAAAGCCTGCCGCCCGAGAATGTCTA TCTCGAACTCGAGGAGCACTATCACACTCGGCTGCTGGCGTACGCCCTGGACGTGTTCGACCTGACCTTTCAGGTGGTCC CGCCGCCGTTCGTGATGCGCCAGTTCGTCAAGACCGGAGTGTTTCTTCCGGAACGGCTCGGCTTCATGTTCGTCGGAGCC GCCGAGATGGCCGGCTGCATCCTGTTCGACGAACTACGCCGGGTCGGCAGTGCACTGTTCGCCGACGAGCCGCAGGTCGC CGAGCGCATCGAACTGCTCTACAGCGAAATCCTCACCGACGAGATCGGGCACGTCGGCTACTGCGCCTCGCGCTGCAGCA CCGCGGAGCGGGCGATCATGCGCCGCCTCTATCCGCTGATCGGTCGGCTGTTCGCGCGACAGACCGCCGAGATCAGCCTG CTCGTCGACCCGAAAGCGTTGCGCGCCAGGCTCGACCGACCCTTCGACGTCGATGAACTCACCGCGGGGGTGGACAACGA AACCTACCTCGTCGCCCACCCCTGA
Upstream 100 bases:
>100_bases TCTTCCTCACCGGGCTGTTCGCGCTGCTGGCCACCGGCGCACACGACGGTGCGCTGTTAAGTCATTACGTGACGACGATT GTCAAAGGGATGGAGAAACG
Downstream 100 bases:
>100_bases CCACGGACTCGACGGCGGACCCTGCAAACAACGTCGCGCCGAGCGTGCACTGAGCGCGACAGATCGGCGAAATATTCGCC GTGAGAACACGAAATATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTATGIEGYRAFLARRDGEADLLNRRLANREQFFTHIEANPVRSARPADRATFLRNLRRRKPEPGLDDKMLFLLATAKLN QAERFGVGLGETYGRNSDESLPPENVYLELEEHYHTRLLAYALDVFDLTFQVVPPPFVMRQFVKTGVFLPERLGFMFVGA AEMAGCILFDELRRVGSALFADEPQVAERIELLYSEILTDEIGHVGYCASRCSTAERAIMRRLYPLIGRLFARQTAEISL LVDPKALRARLDRPFDVDELTAGVDNETYLVAHP
Sequences:
>Translated_274_residues MTATGIEGYRAFLARRDGEADLLNRRLANREQFFTHIEANPVRSARPADRATFLRNLRRRKPEPGLDDKMLFLLATAKLN QAERFGVGLGETYGRNSDESLPPENVYLELEEHYHTRLLAYALDVFDLTFQVVPPPFVMRQFVKTGVFLPERLGFMFVGA AEMAGCILFDELRRVGSALFADEPQVAERIELLYSEILTDEIGHVGYCASRCSTAERAIMRRLYPLIGRLFARQTAEISL LVDPKALRARLDRPFDVDELTAGVDNETYLVAHP >Mature_273_residues TATGIEGYRAFLARRDGEADLLNRRLANREQFFTHIEANPVRSARPADRATFLRNLRRRKPEPGLDDKMLFLLATAKLNQ AERFGVGLGETYGRNSDESLPPENVYLELEEHYHTRLLAYALDVFDLTFQVVPPPFVMRQFVKTGVFLPERLGFMFVGAA EMAGCILFDELRRVGSALFADEPQVAERIELLYSEILTDEIGHVGYCASRCSTAERAIMRRLYPLIGRLFARQTAEISLL VDPKALRARLDRPFDVDELTAGVDNETYLVAHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31097; Mature: 30966
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATGIEGYRAFLARRDGEADLLNRRLANREQFFTHIEANPVRSARPADRATFLRNLRRR CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC KPEPGLDDKMLFLLATAKLNQAERFGVGLGETYGRNSDESLPPENVYLELEEHYHTRLLA CCCCCCCHHHHHHHHHHHHCHHHHHCCCCCHHCCCCCCCCCCCCCEEEEEHHHHHHHHHH YALDVFDLTFQVVPPPFVMRQFVKTGVFLPERLGFMFVGAAEMAGCILFDELRRVGSALF HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHH ADEPQVAERIELLYSEILTDEIGHVGYCASRCSTAERAIMRRLYPLIGRLFARQTAEISL CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LVDPKALRARLDRPFDVDELTAGVDNETYLVAHP EECCHHHHHHCCCCCCHHHHHCCCCCCEEEEECC >Mature Secondary Structure TATGIEGYRAFLARRDGEADLLNRRLANREQFFTHIEANPVRSARPADRATFLRNLRRR CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC KPEPGLDDKMLFLLATAKLNQAERFGVGLGETYGRNSDESLPPENVYLELEEHYHTRLLA CCCCCCCHHHHHHHHHHHHCHHHHHCCCCCHHCCCCCCCCCCCCCEEEEEHHHHHHHHHH YALDVFDLTFQVVPPPFVMRQFVKTGVFLPERLGFMFVGAAEMAGCILFDELRRVGSALF HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHH ADEPQVAERIELLYSEILTDEIGHVGYCASRCSTAERAIMRRLYPLIGRLFARQTAEISL CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LVDPKALRARLDRPFDVDELTAGVDNETYLVAHP EECCHHHHHHCCCCCCHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA