| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is entC
Identifier: 41409414
GI number: 41409414
Start: 3686845
End: 3687939
Strand: Direct
Name: entC
Synonym: MAP3316
Alternate gene names: 41409414
Gene position: 3686845-3687939 (Clockwise)
Preceding gene: 41409413
Following gene: 41409415
Centisome position: 76.34
GC content: 72.79
Gene sequence:
>1095_bases GTGAACGACGAACCGACGTTCGCGCTGTGCGGGCCGACGCAAACCCTGGTCGCCGACGGCGTACGGCGAAGCTACCGCGA CGTGGCCGCCGCGCAGGCCGCGCTGCGCTCCCAAGAAGTGTCAATTGTGTTGGGCGCGTTGCCTTTCGACGTGCGCCGAC CGGCCGCCCTGCTGACCCCGGATACCGTGAGCGTCAGCGACGGCCCACCGGACTGGCCGGCCCGGAAGCTGCCGTCGGTG CGGGTTGCCGCCGCCCTCCCCCCGCCGATCGACTACCGGGACCGGATCTGCCGGGCCCGCGAGCAGCTCGCCGCAACCGA CAACCCGCTGCACAAGGTGGTGCTGGCCCGCGCCCTGCACCTGGTCGCCGACGCCCCGCTGGATGCCCGCACCATCCTGC GCCGGCTGATCGCCGCCGACCCGGGCGCGTACGGCTATCTCGTCGACCTCAGCGCCGCCGGCCACGACCATGCGGGCGTG GCGCTGGTGGGCGCCAGCCCCGAGCTTCTGGTGGCGCGCACCGGCGACCGGGTCGAGTGCCGGCCGTTCGCCGGGTCGGC CCCGCGTGCCGCCGATCCGGACACCGACGCGGCCAACGGTGCCGCGCTGGCGTCGTCGGCCAAGAACCGCCACGAGCATC AGCTGGTGATCGAGACCATCAGGGCCGCCTTGGAGCCGCTGTGCGACGACCTGTCCATCGCGGCCGAACCGCAGCTGAGC CGCACCGCCACGGTGTGGCACCTGTGCACGCCGATCAGCGGGCGGCTGCACGATAGGTCAACCACCGCAATCGATTTGGC GCTGGCGTTGCACCCCACACCGGCGGTCGGCGGGGTGCCGACCGACGCCGCCGTCGAGCTGATCGCCGACCTGGAGGGCG ACCGCGGCTTCTACGCCGGCGCGGTGGGATGGTGTGACGCCCGCGGCGACGGCCGCTGGGTGGTGTCCATCCGCTGCGCG CAGTTGTCGGCCGACCGGCGCAGCGCGCTGGCGCGGGCCGGCGGCGGTATCGTCGCCGAATCCGATCCCGACGACGAAGT CGCGGAAACCACAACGAAATTCGCCACCATACTCAACGCCCTGGACGTCCGATGA
Upstream 100 bases:
>100_bases TGCCGCTCGCCGAAGGCAGCCGCTTCGCCATGATCACCGCGTCGATCGCGGTCTGCGGATTCGAGCACGGGGTGCGGCAA CTGCGGGCGCTCGGGTTGAC
Downstream 100 bases:
>100_bases GCCACCGAATCCGCCACGCCGCACCGCACGACGCCGCCGCCATCACCGAAATGATCCATGCGCTGGCCGAATTCGAGCGC GCCGCCGATCAGTGCATGGT
Product: isochorismate synthase
Products: NA
Alternate protein names: Isochorismate mutase [H]
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MNDEPTFALCGPTQTLVADGVRRSYRDVAAAQAALRSQEVSIVLGALPFDVRRPAALLTPDTVSVSDGPPDWPARKLPSV RVAAALPPPIDYRDRICRAREQLAATDNPLHKVVLARALHLVADAPLDARTILRRLIAADPGAYGYLVDLSAAGHDHAGV ALVGASPELLVARTGDRVECRPFAGSAPRAADPDTDAANGAALASSAKNRHEHQLVIETIRAALEPLCDDLSIAAEPQLS RTATVWHLCTPISGRLHDRSTTAIDLALALHPTPAVGGVPTDAAVELIADLEGDRGFYAGAVGWCDARGDGRWVVSIRCA QLSADRRSALARAGGGIVAESDPDDEVAETTTKFATILNALDVR
Sequences:
>Translated_364_residues MNDEPTFALCGPTQTLVADGVRRSYRDVAAAQAALRSQEVSIVLGALPFDVRRPAALLTPDTVSVSDGPPDWPARKLPSV RVAAALPPPIDYRDRICRAREQLAATDNPLHKVVLARALHLVADAPLDARTILRRLIAADPGAYGYLVDLSAAGHDHAGV ALVGASPELLVARTGDRVECRPFAGSAPRAADPDTDAANGAALASSAKNRHEHQLVIETIRAALEPLCDDLSIAAEPQLS RTATVWHLCTPISGRLHDRSTTAIDLALALHPTPAVGGVPTDAAVELIADLEGDRGFYAGAVGWCDARGDGRWVVSIRCA QLSADRRSALARAGGGIVAESDPDDEVAETTTKFATILNALDVR >Mature_364_residues MNDEPTFALCGPTQTLVADGVRRSYRDVAAAQAALRSQEVSIVLGALPFDVRRPAALLTPDTVSVSDGPPDWPARKLPSV RVAAALPPPIDYRDRICRAREQLAATDNPLHKVVLARALHLVADAPLDARTILRRLIAADPGAYGYLVDLSAAGHDHAGV ALVGASPELLVARTGDRVECRPFAGSAPRAADPDTDAANGAALASSAKNRHEHQLVIETIRAALEPLCDDLSIAAEPQLS RTATVWHLCTPISGRLHDRSTTAIDLALALHPTPAVGGVPTDAAVELIADLEGDRGFYAGAVGWCDARGDGRWVVSIRCA QLSADRRSALARAGGGIVAESDPDDEVAETTTKFATILNALDVR
Specific function: Might be involved in the biosynthesis of menaquinone. Converts chorismate to isochorismate [H]
COG id: COG1169
COG function: function code HQ; Isochorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786809, Length=328, Percent_Identity=39.3292682926829, Blast_Score=216, Evalue=3e-57, Organism=Escherichia coli, GI1788114, Length=275, Percent_Identity=27.6363636363636, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787518, Length=264, Percent_Identity=29.9242424242424, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87082077, Length=260, Percent_Identity=31.1538461538462, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320935, Length=324, Percent_Identity=29.9382716049383, Blast_Score=104, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6324361, Length=311, Percent_Identity=21.5434083601286, Blast_Score=79, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR015890 - InterPro: IPR004561 [H]
Pfam domain/function: PF00425 Chorismate_bind [H]
EC number: =5.4.4.2 [H]
Molecular weight: Translated: 38307; Mature: 38307
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDEPTFALCGPTQTLVADGVRRSYRDVAAAQAALRSQEVSIVLGALPFDVRRPAALLTP CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECC DTVSVSDGPPDWPARKLPSVRVAAALPPPIDYRDRICRAREQLAATDNPLHKVVLARALH CEEECCCCCCCCCHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LVADAPLDARTILRRLIAADPGAYGYLVDLSAAGHDHAGVALVGASPELLVARTGDRVEC HHHCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEECCCCEEE RPFAGSAPRAADPDTDAANGAALASSAKNRHEHQLVIETIRAALEPLCDDLSIAAEPQLS EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RTATVWHLCTPISGRLHDRSTTAIDLALALHPTPAVGGVPTDAAVELIADLEGDRGFYAG HHEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEC AVGWCDARGDGRWVVSIRCAQLSADRRSALARAGGGIVAESDPDDEVAETTTKFATILNA CEEEEECCCCCEEEEEEEEEHHCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH LDVR HCCC >Mature Secondary Structure MNDEPTFALCGPTQTLVADGVRRSYRDVAAAQAALRSQEVSIVLGALPFDVRRPAALLTP CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECC DTVSVSDGPPDWPARKLPSVRVAAALPPPIDYRDRICRAREQLAATDNPLHKVVLARALH CEEECCCCCCCCCHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LVADAPLDARTILRRLIAADPGAYGYLVDLSAAGHDHAGVALVGASPELLVARTGDRVEC HHHCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEECCCCEEE RPFAGSAPRAADPDTDAANGAALASSAKNRHEHQLVIETIRAALEPLCDDLSIAAEPQLS EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RTATVWHLCTPISGRLHDRSTTAIDLALALHPTPAVGGVPTDAAVELIADLEGDRGFYAG HHEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEC AVGWCDARGDGRWVVSIRCAQLSADRRSALARAGGGIVAESDPDDEVAETTTKFATILNA CEEEEECCCCCEEEEEEEEEHHCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH LDVR HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]