Click here to switch to the map view.

The map label for this gene is 41409411

Identifier: 41409411

GI number: 41409411

Start: 3683984

End: 3685210

Strand: Direct

Name: 41409411

Synonym: MAP3313

Alternate gene names: NA

Gene position: 3683984-3685210 (Clockwise)

Preceding gene: 41409410

Following gene: 41409413

Centisome position: 76.28

GC content: 74.25

Gene sequence:

>1227_bases
ATGGTCAGACCCGAGCGGCGGACCAGGGGCGACATCGTGGCCGCCGCGACCATCGCCGTCGTCGTCGCCGCGACCGCCGC
GCTGATCTGGTGGACCAGCGACGCCCGGGCAACCGTCAGCCGCCCGGCGGCCGTGCCGGCGCCCAACCCGAGCCCCGCCC
GGCAAGTGCCGGCCAGCCTCAAACAGTTGTGGACCGCGGCCAGCCCGGCCACCACCGAGCCGGTGGTGGTGGGTGGGGTG
GTCGCCACCGGTGCGGGCCGGCGGATCGACGGCCGCGACCCCGCGACCGGGCAGTCCCGCTGGAGCTATGCCCGCGACAC
CGACCTGTGCGGACTGTCCTGGTTGTACCGCTACGCCGTCGGGGTGTACCGCGATGACCGTGGCTGCGGCCAGGTGAGCA
CCCTCGACGGTTCCACCGGCCGCCGCGGGCCGGCCCGCAGCGGCTACGCCGACCCGCGGGTGCGGCTGTCCTCCGACGGC
ATGACCGTGCTGTCGGTCGGCGACACCCGGCTGGAGCTGTGGCGCTCGGACATGGTGCGGATGCTCACCTACAGCGAGAC
CGACGCCCGGGTGAAACCGTCGGCGCGCGGACTGCACTCGGGCTGCCGGCTGATCTCGGCCGCGGCCAGCTCGTCGGCGG
TCTCGGTGCTGGAGAGCTGTGCGAATCAGGCCGACCTGCGGCTGGTGCTGCTGCGGCCCGGCAAGGACGACGACGAGCCC
CAGCAACACATCGTGGCCGAGCCGGGCATCGCACCGGATTCGGGCGCCCGGGTGCTGGCCGTCCGGGAGGCCACCACCGC
GGTGTATCTGCCGGCGCCGCGGCCGCGGGTCGACGTGATCGATGAAACCGGGACGACGGTGTCGAGCACGCCGCTGCCCA
GACCGCCGTCGCCGTCGGCGGCGGTCTCGCACGCGGGCAGCGTGATGACCTGGTGGACCGGCGATTCGCTGATGGTCTTC
GACGTCAACACCTTGGCGCTGCGCTACACCATCGCCGCCGGGGACAAGACCGCGCCGCTGGGGCCGGGGGCGATGATGGC
GGGCCGGTTGCTGGTGCCCGTCACCGGGGCGATCGGCGTCTACGACCCGATCAGCGGCGCCAGCGAACGCTACATTCCGG
TGGACCGGGCGACCAGCGGCGCGCCACCCGGGGCCGCGGTGGTGCCGGCCGTGTCCGGGTCGCGGGTGTTCGAGCAGCGC
GGCGACACCGTGGTCGCGCTGGGCTGA

Upstream 100 bases:

>100_bases
GCTCCCCACCGGGCAACCCCGGCTCCAGCCGGCGCCGACGCCGGCGTCGCAAGCCCGCGGACGCCACCGCGCAGAGCAAC
TAACGCCCCGGCGCCGACGC

Downstream 100 bases:

>100_bases
TCGCGATCTGGGCCGTCGCTTCGGTTCGGGCCGTCGAGTGTGAATCGTTGGCCTTGCGTGTGTATCTGCGGCGGCGACAC
GCCGAGCGGGCTCGCCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Alanine And Valine Rich Protein

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MVRPERRTRGDIVAAATIAVVVAATAALIWWTSDARATVSRPAAVPAPNPSPARQVPASLKQLWTAASPATTEPVVVGGV
VATGAGRRIDGRDPATGQSRWSYARDTDLCGLSWLYRYAVGVYRDDRGCGQVSTLDGSTGRRGPARSGYADPRVRLSSDG
MTVLSVGDTRLELWRSDMVRMLTYSETDARVKPSARGLHSGCRLISAAASSSAVSVLESCANQADLRLVLLRPGKDDDEP
QQHIVAEPGIAPDSGARVLAVREATTAVYLPAPRPRVDVIDETGTTVSSTPLPRPPSPSAAVSHAGSVMTWWTGDSLMVF
DVNTLALRYTIAAGDKTAPLGPGAMMAGRLLVPVTGAIGVYDPISGASERYIPVDRATSGAPPGAAVVPAVSGSRVFEQR
GDTVVALG

Sequences:

>Translated_408_residues
MVRPERRTRGDIVAAATIAVVVAATAALIWWTSDARATVSRPAAVPAPNPSPARQVPASLKQLWTAASPATTEPVVVGGV
VATGAGRRIDGRDPATGQSRWSYARDTDLCGLSWLYRYAVGVYRDDRGCGQVSTLDGSTGRRGPARSGYADPRVRLSSDG
MTVLSVGDTRLELWRSDMVRMLTYSETDARVKPSARGLHSGCRLISAAASSSAVSVLESCANQADLRLVLLRPGKDDDEP
QQHIVAEPGIAPDSGARVLAVREATTAVYLPAPRPRVDVIDETGTTVSSTPLPRPPSPSAAVSHAGSVMTWWTGDSLMVF
DVNTLALRYTIAAGDKTAPLGPGAMMAGRLLVPVTGAIGVYDPISGASERYIPVDRATSGAPPGAAVVPAVSGSRVFEQR
GDTVVALG
>Mature_408_residues
MVRPERRTRGDIVAAATIAVVVAATAALIWWTSDARATVSRPAAVPAPNPSPARQVPASLKQLWTAASPATTEPVVVGGV
VATGAGRRIDGRDPATGQSRWSYARDTDLCGLSWLYRYAVGVYRDDRGCGQVSTLDGSTGRRGPARSGYADPRVRLSSDG
MTVLSVGDTRLELWRSDMVRMLTYSETDARVKPSARGLHSGCRLISAAASSSAVSVLESCANQADLRLVLLRPGKDDDEP
QQHIVAEPGIAPDSGARVLAVREATTAVYLPAPRPRVDVIDETGTTVSSTPLPRPPSPSAAVSHAGSVMTWWTGDSLMVF
DVNTLALRYTIAAGDKTAPLGPGAMMAGRLLVPVTGAIGVYDPISGASERYIPVDRATSGAPPGAAVVPAVSGSRVFEQR
GDTVVALG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42631; Mature: 42631

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRPERRTRGDIVAAATIAVVVAATAALIWWTSDARATVSRPAAVPAPNPSPARQVPASL
CCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCEECCCCCCCCCCCCCCHHHHHHHH
KQLWTAASPATTEPVVVGGVVATGAGRRIDGRDPATGQSRWSYARDTDLCGLSWLYRYAV
HHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
GVYRDDRGCGQVSTLDGSTGRRGPARSGYADPRVRLSSDGMTVLSVGDTRLELWRSDMVR
HEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCHHHHHHHHHHHH
MLTYSETDARVKPSARGLHSGCRLISAAASSSAVSVLESCANQADLRLVLLRPGKDDDEP
HHEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCH
QQHIVAEPGIAPDSGARVLAVREATTAVYLPAPRPRVDVIDETGTTVSSTPLPRPPSPSA
HHHEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCEEEECCCCCEECCCCCCCCCCCCH
AVSHAGSVMTWWTGDSLMVFDVNTLALRYTIAAGDKTAPLGPGAMMAGRLLVPVTGAIGV
HHHCCCCEEEEEECCEEEEEECCEEEEEEEEECCCCCCCCCCCHHHHCEEEEEECCCCCC
YDPISGASERYIPVDRATSGAPPGAAVVPAVSGSRVFEQRGDTVVALG
CCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCHHHHHCCCEEEEEC
>Mature Secondary Structure
MVRPERRTRGDIVAAATIAVVVAATAALIWWTSDARATVSRPAAVPAPNPSPARQVPASL
CCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCEECCCCCCCCCCCCCCHHHHHHHH
KQLWTAASPATTEPVVVGGVVATGAGRRIDGRDPATGQSRWSYARDTDLCGLSWLYRYAV
HHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
GVYRDDRGCGQVSTLDGSTGRRGPARSGYADPRVRLSSDGMTVLSVGDTRLELWRSDMVR
HEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCHHHHHHHHHHHH
MLTYSETDARVKPSARGLHSGCRLISAAASSSAVSVLESCANQADLRLVLLRPGKDDDEP
HHEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCH
QQHIVAEPGIAPDSGARVLAVREATTAVYLPAPRPRVDVIDETGTTVSSTPLPRPPSPSA
HHHEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCEEEECCCCCEECCCCCCCCCCCCH
AVSHAGSVMTWWTGDSLMVFDVNTLALRYTIAAGDKTAPLGPGAMMAGRLLVPVTGAIGV
HHHCCCCEEEEEECCEEEEEECCEEEEEEEEECCCCCCCCCCCHHHHCEEEEEECCCCCC
YDPISGASERYIPVDRATSGAPPGAAVVPAVSGSRVFEQRGDTVVALG
CCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA