| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409371
Identifier: 41409371
GI number: 41409371
Start: 3632785
End: 3633759
Strand: Reverse
Name: 41409371
Synonym: MAP3273c
Alternate gene names: NA
Gene position: 3633759-3632785 (Counterclockwise)
Preceding gene: 41409374
Following gene: 41409369
Centisome position: 75.24
GC content: 73.23
Gene sequence:
>975_bases ATGAACACCGGCTTCCCGGATCCGGAAACGGTCCGCACGGCACTGGCGCTGGCGTCTCGAGCCCCCTCGGTGCACAACAC CCAACCGTGGCGGTGGCGCATCGATCCGGCCGGCCTGCACCTGTACGCCGACCCCGCCCGGCAACTGCCCCACACCGACC CCGACGGCCGCGACTTGATCCTGAGTTGCGGCATCGCCCTGCAGCACTGCGTCACCGCGTTCGCCGCCGTCGGCTGGCGG TCCAGGGTGCGCAGGCTGCCGGATCCCGACGACCCGGATCACCTTGCGACGCTTGAGTTTTCGCCCCAGACCGCCGACTA CGTCGACGTCGCGCTCGCCGCCGCGATCCCGCGCCGGCGCACCGACCGGCGCCACTACAGCTGTTGGCCGGTGCCGGTCG GCGACATCGCGCTGATGGCGGCCCGGGCGGCCCGCGCCGGGGTGACGCTGTACCAGGTGCAGGACGTCGACGGCCTGCAC GACATCGTCGCGCAATCGATCCGCGACCACCTGACCCAGGATTATCTGGCCGAGCTGACCACCTGGAGTGGGCGCTACTT CTCGGTGTCCGGGGTGCCCGCCCGCAACACCCCGTTCCCGGATCCGGCCGCCAAGATCCCGACCCGGTTGTTCGCCGGCG CGGCGCTGCCGATGGCGCAGGGGTCGTCGGCCGCCGACGACAACGCCGTGGTGCTCGCGCTGGGCACCCGCCACGACGAC CGGCTGGCGCGGCTGCGCGCCGGCGAGGCCACCGGGGTGGTGCTGCTCACCGCCACCTCGGCGGGGCTGGCCAGCTGCCC GGTCACCGAACCGCTGGAGACGCCGCAGACGCGCGCGGCGGTGCGCGCCGACATCTTCGGTGACGGCCACCATCCGCAGA TGCTGCTGCGGGTGGGTTGGGCGCCGATCAACGCGGACCCGTTGCCGGCGACCCCGCGCCGCGACCTCGCCGACTTCGTC GAGTGGGTCGGCTGA
Upstream 100 bases:
>100_bases CGAAAGTCCCTCCGGCTAGAGCCGTCGGGCCCTCGCGGTGCCGCCGAGAACGCGTGATCGTGGATACCGCAGGGCGCCAG GCGAGAAGAGGGGGAATCTC
Downstream 100 bases:
>100_bases TCAGCCCGCCGGTGACCCGAACCGGAAGCGGCGGCCGGTGACGCTCTCGGGAACGATGCGTACGTAGTGCGTCTTCTCCG ACCTGGTCCACGGCAGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MNTGFPDPETVRTALALASRAPSVHNTQPWRWRIDPAGLHLYADPARQLPHTDPDGRDLILSCGIALQHCVTAFAAVGWR SRVRRLPDPDDPDHLATLEFSPQTADYVDVALAAAIPRRRTDRRHYSCWPVPVGDIALMAARAARAGVTLYQVQDVDGLH DIVAQSIRDHLTQDYLAELTTWSGRYFSVSGVPARNTPFPDPAAKIPTRLFAGAALPMAQGSSAADDNAVVLALGTRHDD RLARLRAGEATGVVLLTATSAGLASCPVTEPLETPQTRAAVRADIFGDGHHPQMLLRVGWAPINADPLPATPRRDLADFV EWVG
Sequences:
>Translated_324_residues MNTGFPDPETVRTALALASRAPSVHNTQPWRWRIDPAGLHLYADPARQLPHTDPDGRDLILSCGIALQHCVTAFAAVGWR SRVRRLPDPDDPDHLATLEFSPQTADYVDVALAAAIPRRRTDRRHYSCWPVPVGDIALMAARAARAGVTLYQVQDVDGLH DIVAQSIRDHLTQDYLAELTTWSGRYFSVSGVPARNTPFPDPAAKIPTRLFAGAALPMAQGSSAADDNAVVLALGTRHDD RLARLRAGEATGVVLLTATSAGLASCPVTEPLETPQTRAAVRADIFGDGHHPQMLLRVGWAPINADPLPATPRRDLADFV EWVG >Mature_324_residues MNTGFPDPETVRTALALASRAPSVHNTQPWRWRIDPAGLHLYADPARQLPHTDPDGRDLILSCGIALQHCVTAFAAVGWR SRVRRLPDPDDPDHLATLEFSPQTADYVDVALAAAIPRRRTDRRHYSCWPVPVGDIALMAARAARAGVTLYQVQDVDGLH DIVAQSIRDHLTQDYLAELTTWSGRYFSVSGVPARNTPFPDPAAKIPTRLFAGAALPMAQGSSAADDNAVVLALGTRHDD RLARLRAGEATGVVLLTATSAGLASCPVTEPLETPQTRAAVRADIFGDGHHPQMLLRVGWAPINADPLPATPRRDLADFV EWVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 35076; Mature: 35076
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTGFPDPETVRTALALASRAPSVHNTQPWRWRIDPAGLHLYADPARQLPHTDPDGRDLI CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECHHHHCCCCCCCCCEEE LSCGIALQHCVTAFAAVGWRSRVRRLPDPDDPDHLATLEFSPQTADYVDVALAAAIPRRR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHH TDRRHYSCWPVPVGDIALMAARAARAGVTLYQVQDVDGLHDIVAQSIRDHLTQDYLAELT CCCCCCEECCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH TWSGRYFSVSGVPARNTPFPDPAAKIPTRLFAGAALPMAQGSSAADDNAVVLALGTRHDD HCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHH RLARLRAGEATGVVLLTATSAGLASCPVTEPLETPQTRAAVRADIFGDGHHPQMLLRVGW HHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECC APINADPLPATPRRDLADFVEWVG CCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MNTGFPDPETVRTALALASRAPSVHNTQPWRWRIDPAGLHLYADPARQLPHTDPDGRDLI CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEECHHHHCCCCCCCCCEEE LSCGIALQHCVTAFAAVGWRSRVRRLPDPDDPDHLATLEFSPQTADYVDVALAAAIPRRR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHH TDRRHYSCWPVPVGDIALMAARAARAGVTLYQVQDVDGLHDIVAQSIRDHLTQDYLAELT CCCCCCEECCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH TWSGRYFSVSGVPARNTPFPDPAAKIPTRLFAGAALPMAQGSSAADDNAVVLALGTRHDD HCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHH RLARLRAGEATGVVLLTATSAGLASCPVTEPLETPQTRAAVRADIFGDGHHPQMLLRVGW HHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECC APINADPLPATPRRDLADFVEWVG CCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]