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The map label for this gene is 41409319

Identifier: 41409319

GI number: 41409319

Start: 3572548

End: 3574074

Strand: Direct

Name: 41409319

Synonym: MAP3221

Alternate gene names: NA

Gene position: 3572548-3574074 (Clockwise)

Preceding gene: 41409314

Following gene: 41409322

Centisome position: 73.97

GC content: 70.2

Gene sequence:

>1527_bases
GTGCGGCACTGGCTTTGCCCATACTTGCACGTCAGGCGGTCCCGGGGCCAGAACCGCCCGCACCGCTTATGCACAGTTGG
CGGTTCATCCACAGATTGGCCGCCGACCGATACTGTTCGAACATTTGTTCTATACGGTGGTGGCGTGGGCGTTTTCCTGT
CATCGGAACAGGCGCGGCAGCGCATCGGCGCCGCGCTCGACGCGATCGACGCTGCCCACGACGTGCTGCGGCAGACCTCG
TCGGATCTGGTCGGCACTGGCTTTCGGATCGACGTCGCCGAACGACTCGAAACCCAGGACCGCACCAATCGGGGCCTGAT
GTACCGCTTCTTCGGCGAAATCGCCGACCCTCCCGACGAGGCCGGGTCGTTGCCGGTGGCGCGCTCCATGCTATGGGCGC
GGCTGCGCGTCAGCCCGGGAGAACTCCGGCGCCGCTTCGCGCTCGCGGCCCGCATCCGACCGCGCCGTTCGCTGACCGGC
CCGCCGCTGGACCCCGAGCTGCCGGCATTGGCGGCGGCGGTCGCCGCGGGCGCGGTCGGCGAGGACCACATCCGGGCGGT
GTGCGCCGCGGTCGATGCCTTGCCCTGTGCGGTCCCCCGCTCCGCCACGTCGGACGCTGAGCGCACGCTGGTACGGCATG
CGGCCAAACTCGATGCCGCCGTGATCACCAAGCTGGGCCGGCGAATCGCCGACTATCTCAATCCCGACGGCGAGTTCAGC
GACGTCGATCGCGCCCGCCGCCGCGGTCTGCACCTGGGGCCGCAGGGCGTCGACGGGATGTCGCGGCTGTCCGGGCTGCT
GGGTCCCGAGACCCGCGCCTACTTCGAGGCCGTCGCATCGGCGGTGCGGCCCGGCCGTCACCAACCCGAAGGCGGCGGCG
ATCCGCGGGCACGCGATGAGCGCACGCCGTCGCAGCGTTGCCACGACGCGCTCAAGCTCGGCCTGGAAGTCGCCATCGCC
TCGGGCGGTCTCGGCGTGCATCGCGGCCATCCGGTCACCGTGATCGCCAGCACCACGCTGGCCGAGCTCGACCAGGCCGC
GCGCGCGGTGGCCGACCCGTCGATTCCGATGCCGGCGCCGGCGCTGACGGGCGGCGGTTCACGATTGCCGATGCCGGACA
TGATTCGCATGGCAGCCAAGGCAATTCACTATCTGGCGGTGTTCGACGAGCACACCGGCCGGCCCTTGTATCTGGGGCGG
CAGAAGCGCGTCGCGACCGCGGATCAGCGGCTCATCTGTTATGCCCGTGACCGCGGCTGCACCCGACCCAATTGCCTTGA
ACCCGGTTACCGCTGCGAAGTGCATCATGCGCCGGACTGGGCGGACGGCGGCGGGACCGACGCGGACAAGCTGTTTTTCG
CCTGCGGTCCCGACCATGGCGCGGTCAGCCGGGGCGAGTGGCGCACCAGTGTCGGCGACGATGGGCGATTGGCCTGGACC
GACGGCAACGGGCCACCCCAGATCAACCGGGCACACCATCCCGACGAGCTGCTGCGCGGCGATCCCGACCCGCCCGAAAA
CGATTGA

Upstream 100 bases:

>100_bases
GCGGCGACCACGAGCAACAGAACGATCAGGGCGACGACCCGCCCCGTCGGCTTGTCCATCCCGGGCATCGGCACACCACT
CGACCGGTTGCCTGCCGCTG

Downstream 100 bases:

>100_bases
CGGACGCGGCGATCGGCCGTCAAGCCGGTGTCGGCCCTCGGACGAAGGGATTGCCGGAGTTTTTCCGGTGGTCGTTTTGG
TGCCGATCCGCCGGGTAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MRHWLCPYLHVRRSRGQNRPHRLCTVGGSSTDWPPTDTVRTFVLYGGGVGVFLSSEQARQRIGAALDAIDAAHDVLRQTS
SDLVGTGFRIDVAERLETQDRTNRGLMYRFFGEIADPPDEAGSLPVARSMLWARLRVSPGELRRRFALAARIRPRRSLTG
PPLDPELPALAAAVAAGAVGEDHIRAVCAAVDALPCAVPRSATSDAERTLVRHAAKLDAAVITKLGRRIADYLNPDGEFS
DVDRARRRGLHLGPQGVDGMSRLSGLLGPETRAYFEAVASAVRPGRHQPEGGGDPRARDERTPSQRCHDALKLGLEVAIA
SGGLGVHRGHPVTVIASTTLAELDQAARAVADPSIPMPAPALTGGGSRLPMPDMIRMAAKAIHYLAVFDEHTGRPLYLGR
QKRVATADQRLICYARDRGCTRPNCLEPGYRCEVHHAPDWADGGGTDADKLFFACGPDHGAVSRGEWRTSVGDDGRLAWT
DGNGPPQINRAHHPDELLRGDPDPPEND

Sequences:

>Translated_508_residues
MRHWLCPYLHVRRSRGQNRPHRLCTVGGSSTDWPPTDTVRTFVLYGGGVGVFLSSEQARQRIGAALDAIDAAHDVLRQTS
SDLVGTGFRIDVAERLETQDRTNRGLMYRFFGEIADPPDEAGSLPVARSMLWARLRVSPGELRRRFALAARIRPRRSLTG
PPLDPELPALAAAVAAGAVGEDHIRAVCAAVDALPCAVPRSATSDAERTLVRHAAKLDAAVITKLGRRIADYLNPDGEFS
DVDRARRRGLHLGPQGVDGMSRLSGLLGPETRAYFEAVASAVRPGRHQPEGGGDPRARDERTPSQRCHDALKLGLEVAIA
SGGLGVHRGHPVTVIASTTLAELDQAARAVADPSIPMPAPALTGGGSRLPMPDMIRMAAKAIHYLAVFDEHTGRPLYLGR
QKRVATADQRLICYARDRGCTRPNCLEPGYRCEVHHAPDWADGGGTDADKLFFACGPDHGAVSRGEWRTSVGDDGRLAWT
DGNGPPQINRAHHPDELLRGDPDPPEND
>Mature_508_residues
MRHWLCPYLHVRRSRGQNRPHRLCTVGGSSTDWPPTDTVRTFVLYGGGVGVFLSSEQARQRIGAALDAIDAAHDVLRQTS
SDLVGTGFRIDVAERLETQDRTNRGLMYRFFGEIADPPDEAGSLPVARSMLWARLRVSPGELRRRFALAARIRPRRSLTG
PPLDPELPALAAAVAAGAVGEDHIRAVCAAVDALPCAVPRSATSDAERTLVRHAAKLDAAVITKLGRRIADYLNPDGEFS
DVDRARRRGLHLGPQGVDGMSRLSGLLGPETRAYFEAVASAVRPGRHQPEGGGDPRARDERTPSQRCHDALKLGLEVAIA
SGGLGVHRGHPVTVIASTTLAELDQAARAVADPSIPMPAPALTGGGSRLPMPDMIRMAAKAIHYLAVFDEHTGRPLYLGR
QKRVATADQRLICYARDRGCTRPNCLEPGYRCEVHHAPDWADGGGTDADKLFFACGPDHGAVSRGEWRTSVGDDGRLAWT
DGNGPPQINRAHHPDELLRGDPDPPEND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003870
- InterPro:   IPR003615 [H]

Pfam domain/function: PF02720 DUF222 [H]

EC number: NA

Molecular weight: Translated: 54902; Mature: 54902

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHWLCPYLHVRRSRGQNRPHRLCTVGGSSTDWPPTDTVRTFVLYGGGVGVFLSSEQARQ
CCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHEEEEEECCCEEEEECCHHHHH
RIGAALDAIDAAHDVLRQTSSDLVGTGFRIDVAERLETQDRTNRGLMYRFFGEIADPPDE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCHH
AGSLPVARSMLWARLRVSPGELRRRFALAARIRPRRSLTGPPLDPELPALAAAVAAGAVG
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
EDHIRAVCAAVDALPCAVPRSATSDAERTLVRHAAKLDAAVITKLGRRIADYLNPDGEFS
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
DVDRARRRGLHLGPQGVDGMSRLSGLLGPETRAYFEAVASAVRPGRHQPEGGGDPRARDE
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
RTPSQRCHDALKLGLEVAIASGGLGVHRGHPVTVIASTTLAELDQAARAVADPSIPMPAP
CCHHHHHHHHHHHCHHEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCC
ALTGGGSRLPMPDMIRMAAKAIHYLAVFDEHTGRPLYLGRQKRVATADQRLICYARDRGC
CCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHCCCCEEEEEECCCCC
TRPNCLEPGYRCEVHHAPDWADGGGTDADKLFFACGPDHGAVSRGEWRTSVGDDGRLAWT
CCCCCCCCCCEEEECCCCCCCCCCCCCHHCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE
DGNGPPQINRAHHPDELLRGDPDPPEND
CCCCCCCCCCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MRHWLCPYLHVRRSRGQNRPHRLCTVGGSSTDWPPTDTVRTFVLYGGGVGVFLSSEQARQ
CCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHEEEEEECCCEEEEECCHHHHH
RIGAALDAIDAAHDVLRQTSSDLVGTGFRIDVAERLETQDRTNRGLMYRFFGEIADPPDE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCHH
AGSLPVARSMLWARLRVSPGELRRRFALAARIRPRRSLTGPPLDPELPALAAAVAAGAVG
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
EDHIRAVCAAVDALPCAVPRSATSDAERTLVRHAAKLDAAVITKLGRRIADYLNPDGEFS
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
DVDRARRRGLHLGPQGVDGMSRLSGLLGPETRAYFEAVASAVRPGRHQPEGGGDPRARDE
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
RTPSQRCHDALKLGLEVAIASGGLGVHRGHPVTVIASTTLAELDQAARAVADPSIPMPAP
CCHHHHHHHHHHHCHHEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCC
ALTGGGSRLPMPDMIRMAAKAIHYLAVFDEHTGRPLYLGRQKRVATADQRLICYARDRGC
CCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHCCCCEEEEEECCCCC
TRPNCLEPGYRCEVHHAPDWADGGGTDADKLFFACGPDHGAVSRGEWRTSVGDDGRLAWT
CCCCCCCCCCEEEECCCCCCCCCCCCCHHCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE
DGNGPPQINRAHHPDELLRGDPDPPEND
CCCCCCCCCCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]