Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409266

Identifier: 41409266

GI number: 41409266

Start: 3520308

End: 3521159

Strand: Reverse

Name: 41409266

Synonym: MAP3168c

Alternate gene names: NA

Gene position: 3521159-3520308 (Counterclockwise)

Preceding gene: 41409267

Following gene: 41409265

Centisome position: 72.91

GC content: 69.72

Gene sequence:

>852_bases
GTGACCATGGCCGATCGTCTCGTCACCAAGGTCGACAAGTCCGCCGTGCTGGCCGGCCTTTTCGCCGTCTGGGACGACAT
CGATGCGCTGTTGGCCGGCTTGTCCGAGACCCAATGGCGCGCGCCGAGTCCGCTGCCGGGCTGGGACGTCAAGGCCGTGG
TGTCGCACATGATCGGCACCGAGTCCTTCCTCGCCGGCATCGCCGCACCCGAACCCGACGTCGACGTCTCGGCGCTGGAG
CATGTGCGCAACGACATCGGCGCGATGAACGAGTGCTGGGTGCGTCATCTGAGCGCGCACGCCGACGCCGACGTGCTGGA
AAGTTTCCGCGCGATCACCGATGATCGGCGCGCGGCCTTGACGAGCATGTCCGACGAGGAGTGGGACGCGGTGACGATGA
CGCCCACCAGCCCGGACAGCCACGGCCGGTTCATGCGGATCCGGGTGTTCGACTGCTGGATGCACGAGCAGGACATCCGC
GTGGCGTTGGGGCGGCCGCCCTCGGACGCGGATCTCGCCGGCCCGGCGGCGTCGCTGGCCGTCGACGAGATCGCCGCCAC
CATGGGTTACGTCGTGGGCAAGCTGGCCAAGGCCCCGCAGGGCGCCCGCGTGGAGTTCGAGCTCACCGGTCCGCTGGCCC
GCGTTATCCGGGTCAGCGTCGACGGCCGCGCCACGGTGGTCGACGATTTCGCCGGCGAGCAGGCGACCGCGACGATCCGG
TGCGACGGGCTGCAGTTCACCCGGCTCGCCGGCGGGCGCCCGATGTGCCCCGCGCGCGACCAAACCGTCGAACTCGGCGG
AGACAAAGGCCTGGCCAGCCATGTCGTGGCGCGCCTCAATTTCGTGATCTGA

Upstream 100 bases:

>100_bases
GGGGTCGGTGGCGATGATCGCGTCGGCCTGACGGTTGGTGTCGGTCTAACGCGTCGGCCCGACGGCCGGTGTCGGCGGCG
AGTCCCGCGGCCTACGATCG

Downstream 100 bases:

>100_bases
TCGCCGCCCGGCGGGGAACATAATGCCGTTGCCGCTGGTTGATAGCCATGTACCATTGATAGTCCTGCCGAAAGTCGGCG
GGGATGCGAGGGGCTGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTMADRLVTKVDKSAVLAGLFAVWDDIDALLAGLSETQWRAPSPLPGWDVKAVVSHMIGTESFLAGIAAPEPDVDVSALE
HVRNDIGAMNECWVRHLSAHADADVLESFRAITDDRRAALTSMSDEEWDAVTMTPTSPDSHGRFMRIRVFDCWMHEQDIR
VALGRPPSDADLAGPAASLAVDEIAATMGYVVGKLAKAPQGARVEFELTGPLARVIRVSVDGRATVVDDFAGEQATATIR
CDGLQFTRLAGGRPMCPARDQTVELGGDKGLASHVVARLNFVI

Sequences:

>Translated_283_residues
MTMADRLVTKVDKSAVLAGLFAVWDDIDALLAGLSETQWRAPSPLPGWDVKAVVSHMIGTESFLAGIAAPEPDVDVSALE
HVRNDIGAMNECWVRHLSAHADADVLESFRAITDDRRAALTSMSDEEWDAVTMTPTSPDSHGRFMRIRVFDCWMHEQDIR
VALGRPPSDADLAGPAASLAVDEIAATMGYVVGKLAKAPQGARVEFELTGPLARVIRVSVDGRATVVDDFAGEQATATIR
CDGLQFTRLAGGRPMCPARDQTVELGGDKGLASHVVARLNFVI
>Mature_282_residues
TMADRLVTKVDKSAVLAGLFAVWDDIDALLAGLSETQWRAPSPLPGWDVKAVVSHMIGTESFLAGIAAPEPDVDVSALEH
VRNDIGAMNECWVRHLSAHADADVLESFRAITDDRRAALTSMSDEEWDAVTMTPTSPDSHGRFMRIRVFDCWMHEQDIRV
ALGRPPSDADLAGPAASLAVDEIAATMGYVVGKLAKAPQGARVEFELTGPLARVIRVSVDGRATVVDDFAGEQATATIRC
DGLQFTRLAGGRPMCPARDQTVELGGDKGLASHVVARLNFVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30418; Mature: 30287

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMADRLVTKVDKSAVLAGLFAVWDDIDALLAGLSETQWRAPSPLPGWDVKAVVSHMIGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCH
ESFLAGIAAPEPDVDVSALEHVRNDIGAMNECWVRHLSAHADADVLESFRAITDDRRAAL
HHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH
TSMSDEEWDAVTMTPTSPDSHGRFMRIRVFDCWMHEQDIRVALGRPPSDADLAGPAASLA
HCCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHH
VDEIAATMGYVVGKLAKAPQGARVEFELTGPLARVIRVSVDGRATVVDDFAGEQATATIR
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHEEEECCCCEEEEECCCCCCEEEEEE
CDGLQFTRLAGGRPMCPARDQTVELGGDKGLASHVVARLNFVI
ECCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TMADRLVTKVDKSAVLAGLFAVWDDIDALLAGLSETQWRAPSPLPGWDVKAVVSHMIGT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCH
ESFLAGIAAPEPDVDVSALEHVRNDIGAMNECWVRHLSAHADADVLESFRAITDDRRAAL
HHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH
TSMSDEEWDAVTMTPTSPDSHGRFMRIRVFDCWMHEQDIRVALGRPPSDADLAGPAASLA
HCCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHH
VDEIAATMGYVVGKLAKAPQGARVEFELTGPLARVIRVSVDGRATVVDDFAGEQATATIR
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHEEEECCCCEEEEECCCCCCEEEEEE
CDGLQFTRLAGGRPMCPARDQTVELGGDKGLASHVVARLNFVI
ECCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA